RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 NEO1Q92859 1461 aa18.72■□□□□ 0.59
SCN8A-215ENST00000638820 EIF4G2P78344 907 aaKnown RBP eCLIP18.72■□□□□ 0.59
SCN8A-215ENST00000638820 POGZQ7Z3K3 1410 aa18.72■□□□□ 0.59
SCN8A-215ENST00000638820 DDX10Q13206 875 aaKnown RBP18.72■□□□□ 0.59
SCN8A-215ENST00000638820 FAM135AQ9P2D6 1515 aa18.71■□□□□ 0.59
SCN8A-215ENST00000638820 MAST1Q9Y2H9 1570 aa18.7■□□□□ 0.58
SCN8A-215ENST00000638820 RPRD2Q5VT52 1461 aaKnown RBP18.69■□□□□ 0.58
SCN8A-215ENST00000638820 ZFYVE16Q7Z3T8 1539 aa18.69■□□□□ 0.58
SCN8A-215ENST00000638820 CFAP74Q9C0B2 1584 aa18.69■□□□□ 0.58
SCN8A-215ENST00000638820 A2MP01023 1474 aa18.68■□□□□ 0.58
SCN8A-215ENST00000638820 TEX14Q8IWB6 1497 aa18.68■□□□□ 0.58
SCN8A-215ENST00000638820 PLXNC1O60486 1568 aa18.67■□□□□ 0.58
SCN8A-215ENST00000638820 PLPPR3Q6T4P5 718 aa18.66■□□□□ 0.58
SCN8A-215ENST00000638820 NBPF8Q3BBV2 869 aa18.65■□□□□ 0.58
SCN8A-215ENST00000638820 CARD11Q9BXL7 1154 aa18.65■□□□□ 0.58
SCN8A-215ENST00000638820 HSPA5P11021 654 aaKnown RBP18.64■□□□□ 0.57
SCN8A-215ENST00000638820 YTHDC1Q96MU7 727 aaKnown RBP18.62■□□□□ 0.57
SCN8A-215ENST00000638820 STAG3Q9UJ98 1225 aa18.62■□□□□ 0.57
SCN8A-215ENST00000638820 SENP3Q9H4L4 574 aaPredicted RBP18.62■□□□□ 0.57
SCN8A-215ENST00000638820 DIP2BQ9P265 1576 aa18.61■□□□□ 0.57
SCN8A-215ENST00000638820 CNGB1Q14028 1251 aaPredicted RBP18.61■□□□□ 0.57
SCN8A-215ENST00000638820 MIER1Q8N108 512 aa18.61■□□□□ 0.57
SCN8A-215ENST00000638820 MLH3Q9UHC1 1453 aa18.6■□□□□ 0.57
SCN8A-215ENST00000638820 YEATS2Q9ULM3 1422 aa18.6■□□□□ 0.57
SCN8A-215ENST00000638820 HECW2Q9P2P5 1572 aa18.57■□□□□ 0.56
SCN8A-215ENST00000638820 INO80Q9ULG1 1556 aaPredicted RBP18.56■□□□□ 0.56
SCN8A-215ENST00000638820 GLI2P10070 1586 aa18.56■□□□□ 0.56
SCN8A-215ENST00000638820 KDM5DQ9BY66 1539 aa18.56■□□□□ 0.56
SCN8A-215ENST00000638820 KIDINS220Q9ULH0 1771 aa18.54■□□□□ 0.56
SCN8A-215ENST00000638820 CFAP65Q6ZU64 1925 aaKnown RBP18.54■□□□□ 0.56
SCN8A-215ENST00000638820 ROCK2O75116 1388 aaKnown RBP18.54■□□□□ 0.56
SCN8A-215ENST00000638820 MAP3K4Q9Y6R4 1608 aa18.53■□□□□ 0.56
SCN8A-215ENST00000638820 DNAJC5Q9H3Z4 198 aa18.53■□□□□ 0.56
SCN8A-215ENST00000638820 UNC13BO14795 1591 aa18.52■□□□□ 0.56
SCN8A-215ENST00000638820 NUTM2DQ5VT03 806 aaPredicted RBP18.5■□□□□ 0.55
SCN8A-215ENST00000638820 ANP32CO43423 234 aa18.5■□□□□ 0.55
SCN8A-215ENST00000638820 KDM5CP41229 1560 aa18.5■□□□□ 0.55
SCN8A-215ENST00000638820 IQGAP3Q86VI3 1631 aa18.49■□□□□ 0.55
SCN8A-215ENST00000638820 USP47Q96K76 1375 aa18.47■□□□□ 0.55
SCN8A-215ENST00000638820 ATP10AO60312 1499 aa18.47■□□□□ 0.55
SCN8A-215ENST00000638820 PLA2R1Q13018 1463 aa18.47■□□□□ 0.55
SCN8A-215ENST00000638820 NBPF1Q3BBV0 1214 aa18.47■□□□□ 0.55
SCN8A-215ENST00000638820 ST20-MTHFSA0A0A6YYL1 179 aa18.45■□□□□ 0.54
SCN8A-215ENST00000638820 BCANQ96GW7 911 aa18.45■□□□□ 0.54
SCN8A-215ENST00000638820 FBXO31Q5XUX0 539 aaPredicted RBP18.44■□□□□ 0.54
SCN8A-215ENST00000638820 ABCA6Q8N139 1617 aa18.44■□□□□ 0.54
SCN8A-215ENST00000638820 MAGI2Q86UL8 1455 aa18.44■□□□□ 0.54
SCN8A-215ENST00000638820 DIP2CQ9Y2E4 1556 aa18.42■□□□□ 0.54
SCN8A-215ENST00000638820 COL17A1Q9UMD9 1497 aaPredicted RBP18.41■□□□□ 0.54
SCN8A-215ENST00000638820 NPATQ14207 1427 aa18.4■□□□□ 0.54
SCN8A-215ENST00000638820 EIF2AK4Q9P2K8 1649 aaKnown RBP18.4■□□□□ 0.54
SCN8A-215ENST00000638820 CENPBP07199 599 aaPredicted RBP18.39■□□□□ 0.54
SCN8A-215ENST00000638820 IDI1Q13907 227 aa18.39■□□□□ 0.54
SCN8A-215ENST00000638820 RICTORQ6R327 1708 aa18.39■□□□□ 0.53
SCN8A-215ENST00000638820 PRDM15P57071 1507 aaPredicted RBP18.39■□□□□ 0.53
SCN8A-215ENST00000638820 TET3O43151 1660 aa18.38■□□□□ 0.53
SCN8A-215ENST00000638820 WASHC2AQ641Q2 1341 aa18.38■□□□□ 0.53
SCN8A-215ENST00000638820 SLC52A1Q9NWF4 448 aa18.38■□□□□ 0.53
SCN8A-215ENST00000638820 CFAP70Q5T0N1 1121 aa18.37■□□□□ 0.53
SCN8A-215ENST00000638820 E9PCH4 1651 aa18.37■□□□□ 0.53
SCN8A-215ENST00000638820 STAC3Q96MF2 364 aa18.37■□□□□ 0.53
SCN8A-215ENST00000638820 FRMPD1Q5SYB0 1578 aa18.36■□□□□ 0.53
SCN8A-215ENST00000638820 KIF13AQ9H1H9 1805 aa18.36■□□□□ 0.53
SCN8A-215ENST00000638820 UGGT1Q9NYU2 1555 aa18.35■□□□□ 0.53
SCN8A-215ENST00000638820 CEP152O94986 1710 aa18.35■□□□□ 0.53
SCN8A-215ENST00000638820 VGFO15240 615 aaPredicted RBP18.34■□□□□ 0.53
SCN8A-215ENST00000638820 PPP6R1Q9UPN7 881 aa18.34■□□□□ 0.53
SCN8A-215ENST00000638820 C11orf95C9JLR9 678 aaPredicted RBP18.34■□□□□ 0.53
SCN8A-215ENST00000638820 EFCAB6Q5THR3 1501 aa18.34■□□□□ 0.53
SCN8A-215ENST00000638820 PTPRTO14522 1441 aa18.34■□□□□ 0.53
SCN8A-215ENST00000638820 PRAG1Q86YV5 1406 aa18.34■□□□□ 0.53
SCN8A-215ENST00000638820 ADGRF5Q8IZF2 1346 aa18.34■□□□□ 0.53
SCN8A-215ENST00000638820 ABCC3O15438 1527 aa18.33■□□□□ 0.52
SCN8A-215ENST00000638820 TRPM2O94759 1503 aa18.33■□□□□ 0.52
SCN8A-215ENST00000638820 DEPDC5O75140 1603 aa18.33■□□□□ 0.52
SCN8A-215ENST00000638820 KIF7Q2M1P5 1343 aa18.33■□□□□ 0.52
SCN8A-215ENST00000638820 CCDC7Q96M83 1385 aa18.31■□□□□ 0.52
SCN8A-215ENST00000638820 CNTLNQ9NXG0 1405 aa18.31■□□□□ 0.52
SCN8A-215ENST00000638820 UHRF1BP1Q6BDS2 1440 aa18.31■□□□□ 0.52
SCN8A-215ENST00000638820 TMF1P82094 1093 aa18.3■□□□□ 0.52
SCN8A-215ENST00000638820 PPRC1Q5VV67 1664 aaKnown RBP18.3■□□□□ 0.52
SCN8A-215ENST00000638820 RALGAPBQ86X10 1494 aa18.3■□□□□ 0.52
SCN8A-215ENST00000638820 STK26Q9P289 416 aa18.3■□□□□ 0.52
SCN8A-215ENST00000638820 TRAK1Q9UPV9 953 aa18.3■□□□□ 0.52
SCN8A-215ENST00000638820 SPHKAPQ2M3C7 1700 aa18.3■□□□□ 0.52
SCN8A-215ENST00000638820 SPATA31E1Q6ZUB1 1445 aa18.3■□□□□ 0.52
SCN8A-215ENST00000638820 CEBPAP49715 358 aaPredicted RBP18.3■□□□□ 0.52
SCN8A-215ENST00000638820 MROH1Q8NDA8 1641 aa18.3■□□□□ 0.52
SCN8A-215ENST00000638820 ZMYM4Q5VZL5 1548 aa18.3■□□□□ 0.52
SCN8A-215ENST00000638820 TMEM132EQ6IEE7 984 aa18.3■□□□□ 0.52
SCN8A-215ENST00000638820 NOS1P29475 1434 aa18.29■□□□□ 0.52
SCN8A-215ENST00000638820 SAFB2Q14151 953 aaKnown RBP eCLIP18.28■□□□□ 0.52
SCN8A-215ENST00000638820 VWDEQ8N2E2 1590 aa18.28■□□□□ 0.52
SCN8A-215ENST00000638820 CLTCL1P53675 1640 aa18.27■□□□□ 0.52
SCN8A-215ENST00000638820 RNF17Q9BXT8 1623 aaKnown RBP18.27■□□□□ 0.52
SCN8A-215ENST00000638820 ZMYM3Q14202 1370 aa18.25■□□□□ 0.51
SCN8A-215ENST00000638820 LMTK2Q8IWU2 1503 aa18.25■□□□□ 0.51
SCN8A-215ENST00000638820 RPGRIP1LQ68CZ1 1315 aa18.25■□□□□ 0.51
SCN8A-215ENST00000638820 EIF3AQ14152 1382 aaKnown RBP18.23■□□□□ 0.51
SCN8A-215ENST00000638820 HDGFP51858 240 aaKnown RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms