RNA–Protein interactions for RNA: ENST00000638230.1

HNRNPU-212, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 1,922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-212ENST00000638230 ANKRD50Q9ULJ7 1429 aa16.28■□□□□ 0.2
HNRNPU-212ENST00000638230 CEP170Q5SW79 1584 aa16.28■□□□□ 0.2
HNRNPU-212ENST00000638230 PLEKHH2Q8IVE3 1493 aa16.28■□□□□ 0.2
HNRNPU-212ENST00000638230 SHANK2Q9UPX8 1470 aa16.27■□□□□ 0.2
HNRNPU-212ENST00000638230 CFDP1Q9UEE9 299 aaPredicted RBP16.27■□□□□ 0.19
HNRNPU-212ENST00000638230 KIAA0586Q9BVV6 1533 aa16.26■□□□□ 0.19
HNRNPU-212ENST00000638230 GPATCH8Q9UKJ3 1502 aaKnown RBP16.26■□□□□ 0.19
HNRNPU-212ENST00000638230 SENP3-EIF4A1A0A087X0R7 540 aa16.26■□□□□ 0.19
HNRNPU-212ENST00000638230 ANO8Q9HCE9 1232 aaPredicted RBP16.26■□□□□ 0.19
HNRNPU-212ENST00000638230 BLMP54132 1417 aaPredicted RBP16.24■□□□□ 0.19
HNRNPU-212ENST00000638230 ST20-MTHFSA0A0A6YYL1 179 aa16.23■□□□□ 0.19
HNRNPU-212ENST00000638230 PRG4Q92954 1404 aaPredicted RBP16.23■□□□□ 0.19
HNRNPU-212ENST00000638230 SALL2Q9Y467 1007 aaPredicted RBP16.22■□□□□ 0.19
HNRNPU-212ENST00000638230 NUP155O75694 1391 aa16.21■□□□□ 0.19
HNRNPU-212ENST00000638230 CDC42BPAQ5VT25 1732 aa16.2■□□□□ 0.18
HNRNPU-212ENST00000638230 TRPM1Q7Z4N2 1603 aa16.2■□□□□ 0.18
HNRNPU-212ENST00000638230 LAMC1P11047 1609 aa16.19■□□□□ 0.18
HNRNPU-212ENST00000638230 PTPRGP23470 1445 aa16.18■□□□□ 0.18
HNRNPU-212ENST00000638230 C9orf84Q5VXU9 1444 aa16.18■□□□□ 0.18
HNRNPU-212ENST00000638230 GSE1Q14687 1217 aa16.17■□□□□ 0.18
HNRNPU-212ENST00000638230 COL17A1Q9UMD9 1497 aaPredicted RBP16.17■□□□□ 0.18
HNRNPU-212ENST00000638230 RTN4Q9NQC3 1192 aaKnown RBP16.17■□□□□ 0.18
HNRNPU-212ENST00000638230 CRBNQ96SW2 442 aa16.16■□□□□ 0.18
HNRNPU-212ENST00000638230 EIF4G3O43432 1585 aaKnown RBP16.16■□□□□ 0.18
HNRNPU-212ENST00000638230 DAXXQ9UER7 740 aaPredicted RBP16.15■□□□□ 0.18
HNRNPU-212ENST00000638230 ZNF777Q9ULD5 760 aaPredicted RBP16.15■□□□□ 0.18
HNRNPU-212ENST00000638230 ZNF608Q9ULD9 1512 aaPredicted RBP16.15■□□□□ 0.18
HNRNPU-212ENST00000638230 PRAG1Q86YV5 1406 aa16.14■□□□□ 0.17
HNRNPU-212ENST00000638230 DCAF11Q8TEB1 546 aa16.14■□□□□ 0.17
HNRNPU-212ENST00000638230 CDCA7LQ96GN5 454 aa16.14■□□□□ 0.17
HNRNPU-212ENST00000638230 KDM2AQ9Y2K7 1162 aa16.14■□□□□ 0.17
HNRNPU-212ENST00000638230 MRC2Q9UBG0 1479 aa16.13■□□□□ 0.17
HNRNPU-212ENST00000638230 NFKBIBQ15653 356 aa16.13■□□□□ 0.17
HNRNPU-212ENST00000638230 CENPQQ7L2Z9 268 aaPredicted RBP16.13■□□□□ 0.17
HNRNPU-212ENST00000638230 KDM2BQ8NHM5 1336 aa16.12■□□□□ 0.17
HNRNPU-212ENST00000638230 GRIN2AQ12879 1464 aa16.12■□□□□ 0.17
HNRNPU-212ENST00000638230 GPRASP1Q5JY77 1395 aa16.12■□□□□ 0.17
HNRNPU-212ENST00000638230 EIF2AK4Q9P2K8 1649 aaKnown RBP16.12■□□□□ 0.17
HNRNPU-212ENST00000638230 PRDM15P57071 1507 aaPredicted RBP16.12■□□□□ 0.17
HNRNPU-212ENST00000638230 ARHGEF5Q12774 1597 aa16.12■□□□□ 0.17
HNRNPU-212ENST00000638230 IFT140Q96RY7 1462 aa16.12■□□□□ 0.17
HNRNPU-212ENST00000638230 PER1O15534 1290 aaPredicted RBP16.11■□□□□ 0.17
HNRNPU-212ENST00000638230 PLIN1O60240 522 aa16.11■□□□□ 0.17
HNRNPU-212ENST00000638230 FAM135AQ9P2D6 1515 aa16.1■□□□□ 0.17
HNRNPU-212ENST00000638230 PLB1Q6P1J6 1458 aa16.09■□□□□ 0.17
HNRNPU-212ENST00000638230 FAM161AQ3B820 660 aa16.09■□□□□ 0.17
HNRNPU-212ENST00000638230 ABCC10Q5T3U5 1492 aa16.08■□□□□ 0.17
HNRNPU-212ENST00000638230 CCDC144AA2RUR9 1427 aa16.08■□□□□ 0.16
HNRNPU-212ENST00000638230 BRPF3Q9ULD4 1205 aa16.07■□□□□ 0.16
HNRNPU-212ENST00000638230 TSPY4P0CV99 314 aa16.06■□□□□ 0.16
HNRNPU-212ENST00000638230 TSPY10P0CW01 314 aa16.06■□□□□ 0.16
HNRNPU-212ENST00000638230 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.06■□□□□ 0.16
HNRNPU-212ENST00000638230 ERBINQ96RT1 1412 aa16.06■□□□□ 0.16
HNRNPU-212ENST00000638230 CLASP1Q7Z460 1538 aa16.06■□□□□ 0.16
HNRNPU-212ENST00000638230 CC2D1BQ5T0F9 858 aaKnown RBP16.05■□□□□ 0.16
HNRNPU-212ENST00000638230 FRAT1Q92837 279 aaPredicted RBP16.05■□□□□ 0.16
HNRNPU-212ENST00000638230 NUP160Q12769 1436 aa16.04■□□□□ 0.16
HNRNPU-212ENST00000638230 DISP3Q9P2K9 1392 aa16.04■□□□□ 0.16
HNRNPU-212ENST00000638230 MYO5CQ9NQX4 1742 aa16.04■□□□□ 0.16
HNRNPU-212ENST00000638230 MAGI1Q96QZ7 1491 aaPredicted RBP16.04■□□□□ 0.16
HNRNPU-212ENST00000638230 CARMIL2Q6F5E8 1435 aa16.04■□□□□ 0.16
HNRNPU-212ENST00000638230 EIF3AQ14152 1382 aaKnown RBP16.04■□□□□ 0.16
HNRNPU-212ENST00000638230 UNC13BO14795 1591 aa16.03■□□□□ 0.16
HNRNPU-212ENST00000638230 VIRMAQ69YN4 1812 aaKnown RBP16.03■□□□□ 0.16
HNRNPU-212ENST00000638230 C8orf34Q49A92 452 aa16.03■□□□□ 0.16
HNRNPU-212ENST00000638230 ABCA8O94911 1581 aa16.03■□□□□ 0.16
HNRNPU-212ENST00000638230 A2MP01023 1474 aa16.03■□□□□ 0.16
HNRNPU-212ENST00000638230 SKAP1Q86WV1 359 aa16.02■□□□□ 0.16
HNRNPU-212ENST00000638230 RNF17Q9BXT8 1623 aaKnown RBP16.02■□□□□ 0.15
HNRNPU-212ENST00000638230 TMF1P82094 1093 aa16.02■□□□□ 0.15
HNRNPU-212ENST00000638230 C20orf194Q5TEA3 1177 aa16.02■□□□□ 0.15
HNRNPU-212ENST00000638230 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.02■□□□□ 0.15
HNRNPU-212ENST00000638230 SYNJ2O15056 1496 aa16.01■□□□□ 0.15
HNRNPU-212ENST00000638230 CCDC141Q6ZP82 1450 aa16.01■□□□□ 0.15
HNRNPU-212ENST00000638230 TESK2Q96S53 571 aa16■□□□□ 0.15
HNRNPU-212ENST00000638230 PANK3Q9H999 370 aa16■□□□□ 0.15
HNRNPU-212ENST00000638230 PLEKHD1A6NEE1 506 aa16■□□□□ 0.15
HNRNPU-212ENST00000638230 SLC4A3P48751 1232 aa16■□□□□ 0.15
HNRNPU-212ENST00000638230 WDR43Q15061 677 aaKnown RBP eCLIP15.98■□□□□ 0.152e-6■■□□□ 13.5
HNRNPU-212ENST00000638230 DUSP27Q5VZP5 1158 aa15.98■□□□□ 0.15
HNRNPU-212ENST00000638230 NBPF1Q3BBV0 1214 aa15.98■□□□□ 0.15
HNRNPU-212ENST00000638230 PLEKHH1Q9ULM0 1364 aa15.97■□□□□ 0.15
HNRNPU-212ENST00000638230 MAST1Q9Y2H9 1570 aa15.97■□□□□ 0.15
HNRNPU-212ENST00000638230 ZNF521Q96K83 1311 aa15.97■□□□□ 0.15
HNRNPU-212ENST00000638230 PREX2Q70Z35 1606 aa15.96■□□□□ 0.15
HNRNPU-212ENST00000638230 IQGAP3Q86VI3 1631 aa15.96■□□□□ 0.15
HNRNPU-212ENST00000638230 GOLGA2Q08379 1002 aa15.96■□□□□ 0.15
HNRNPU-212ENST00000638230 ADAMTS8Q9UP79 889 aa15.96■□□□□ 0.15
HNRNPU-212ENST00000638230 SYNMO15061 1565 aa15.96■□□□□ 0.14
HNRNPU-212ENST00000638230 SAMD9LQ8IVG5 1584 aa15.96■□□□□ 0.14
HNRNPU-212ENST00000638230 FAM43AQ8N2R8 423 aa15.96■□□□□ 0.14
HNRNPU-212ENST00000638230 PLA2R1Q13018 1463 aa15.94■□□□□ 0.14
HNRNPU-212ENST00000638230 RSPH4AQ5TD94 716 aa15.94■□□□□ 0.14
HNRNPU-212ENST00000638230 ATP10BO94823 1461 aa15.94■□□□□ 0.14
HNRNPU-212ENST00000638230 ABCC2Q92887 1545 aa15.94■□□□□ 0.14
HNRNPU-212ENST00000638230 FRAT2O75474 233 aaPredicted RBP15.94■□□□□ 0.14
HNRNPU-212ENST00000638230 PIK3C2GO75747 1445 aa15.94■□□□□ 0.14
HNRNPU-212ENST00000638230 WDR7Q9Y4E6 1490 aa15.93■□□□□ 0.14
HNRNPU-212ENST00000638230 PPP2R1AP30153 589 aa15.92■□□□□ 0.14
HNRNPU-212ENST00000638230 UBE2Q2Q8WVN8 375 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms