RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 FAM135AQ9P2D6 1515 aa15.05■□□□□ -0
LINC00598-216ENST00000638163 DEPDC5O75140 1603 aa15.04■□□□□ -0
LINC00598-216ENST00000638163 FRMPD1Q5SYB0 1578 aa15.04■□□□□ -0
LINC00598-216ENST00000638163 SLC4A1APQ9BWU0 796 aaKnown RBP15.04■□□□□ -0
LINC00598-216ENST00000638163 IQGAP3Q86VI3 1631 aa15.03■□□□□ -0
LINC00598-216ENST00000638163 PRDM15P57071 1507 aaPredicted RBP15.03■□□□□ -0
LINC00598-216ENST00000638163 PZPP20742 1482 aa15.02■□□□□ -0
LINC00598-216ENST00000638163 RNF17Q9BXT8 1623 aaKnown RBP15.02□□□□□ -0.01
LINC00598-216ENST00000638163 DIP2CQ9Y2E4 1556 aa15.02□□□□□ -0.01
LINC00598-216ENST00000638163 ABCA6Q8N139 1617 aa15.01□□□□□ -0.01
LINC00598-216ENST00000638163 ATP10AO60312 1499 aa15.01□□□□□ -0.01
LINC00598-216ENST00000638163 RAPGEF3O95398 923 aa15□□□□□ -0.01
LINC00598-216ENST00000638163 PPP6R1Q9UPN7 881 aa15□□□□□ -0.01
LINC00598-216ENST00000638163 AGLP35573 1532 aa15□□□□□ -0.01
LINC00598-216ENST00000638163 ARHGEF40Q8TER5 1519 aa14.99□□□□□ -0.01
LINC00598-216ENST00000638163 VWDEQ8N2E2 1590 aa14.98□□□□□ -0.01
LINC00598-216ENST00000638163 LMTK2Q8IWU2 1503 aa14.98□□□□□ -0.01
LINC00598-216ENST00000638163 ANKRD30BQ9BXX2 1392 aa14.96□□□□□ -0.02
LINC00598-216ENST00000638163 RPRD2Q5VT52 1461 aaKnown RBP14.95□□□□□ -0.02
LINC00598-216ENST00000638163 KIF3BO15066 747 aa14.95□□□□□ -0.02
LINC00598-216ENST00000638163 TET3O43151 1660 aa14.95□□□□□ -0.02
LINC00598-216ENST00000638163 ZC3H13Q5T200 1668 aaKnown RBP14.95□□□□□ -0.02
LINC00598-216ENST00000638163 PKD2Q13563 968 aa14.94□□□□□ -0.02
LINC00598-216ENST00000638163 TONSLQ96HA7 1378 aa14.93□□□□□ -0.02
LINC00598-216ENST00000638163 YEATS2Q9ULM3 1422 aa14.92□□□□□ -0.02
LINC00598-216ENST00000638163 MROH1Q8NDA8 1641 aa14.92□□□□□ -0.02
LINC00598-216ENST00000638163 EFCAB6Q5THR3 1501 aa14.9□□□□□ -0.02
LINC00598-216ENST00000638163 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.89□□□□□ -0.03
LINC00598-216ENST00000638163 CCDC144AA2RUR9 1427 aa14.89□□□□□ -0.03
LINC00598-216ENST00000638163 ARHGAP31Q2M1Z3 1444 aa14.89□□□□□ -0.03
LINC00598-216ENST00000638163 ABCC3O15438 1527 aa14.87□□□□□ -0.03
LINC00598-216ENST00000638163 NEURL4Q96JN8 1562 aa14.86□□□□□ -0.03
LINC00598-216ENST00000638163 PTPRTO14522 1441 aa14.86□□□□□ -0.03
LINC00598-216ENST00000638163 STAC3Q96MF2 364 aa14.86□□□□□ -0.03
LINC00598-216ENST00000638163 WASHC2CQ9Y4E1 1318 aa14.86□□□□□ -0.03
LINC00598-216ENST00000638163 TRPM2O94759 1503 aa14.86□□□□□ -0.03
LINC00598-216ENST00000638163 CNTLNQ9NXG0 1405 aa14.84□□□□□ -0.03
LINC00598-216ENST00000638163 KDM4FA0A1W2PPD8 638 aa14.83□□□□□ -0.04
LINC00598-216ENST00000638163 NEUROD1Q13562 356 aa14.83□□□□□ -0.04
LINC00598-216ENST00000638163 E9PCH4 1651 aa14.82□□□□□ -0.04
LINC00598-216ENST00000638163 GGT6Q6P531 493 aa14.82□□□□□ -0.04
LINC00598-216ENST00000638163 CAMSAP1Q5T5Y3 1602 aa14.81□□□□□ -0.04
LINC00598-216ENST00000638163 AEBP2Q6ZN18 517 aaPredicted RBP14.81□□□□□ -0.04
LINC00598-216ENST00000638163 SIN3AQ96ST3 1273 aa14.81□□□□□ -0.04
LINC00598-216ENST00000638163 SPHKAPQ2M3C7 1700 aa14.8□□□□□ -0.04
LINC00598-216ENST00000638163 ESF1Q9H501 851 aaKnown RBP14.8□□□□□ -0.04
LINC00598-216ENST00000638163 PLA2R1Q13018 1463 aa14.78□□□□□ -0.04
LINC00598-216ENST00000638163 NPATQ14207 1427 aa14.78□□□□□ -0.04
LINC00598-216ENST00000638163 PPP1R15AO75807 674 aaPredicted RBP14.78□□□□□ -0.04
LINC00598-216ENST00000638163 FOXD1Q16676 465 aa14.78□□□□□ -0.04
LINC00598-216ENST00000638163 CEP152O94986 1710 aa14.78□□□□□ -0.04
LINC00598-216ENST00000638163 NOS1P29475 1434 aa14.76□□□□□ -0.05
LINC00598-216ENST00000638163 ARID4BQ4LE39 1312 aaPredicted RBP14.75□□□□□ -0.05
LINC00598-216ENST00000638163 SLC52A1Q9NWF4 448 aa14.75□□□□□ -0.05
LINC00598-216ENST00000638163 MROH2AA6NES4 1674 aa14.74□□□□□ -0.05
LINC00598-216ENST00000638163 UHRF1BP1Q6BDS2 1440 aa14.74□□□□□ -0.05
LINC00598-216ENST00000638163 L3MBTL2Q969R5 705 aa14.72□□□□□ -0.05
LINC00598-216ENST00000638163 SPATA31E1Q6ZUB1 1445 aa14.72□□□□□ -0.05
LINC00598-216ENST00000638163 RPGRIP1LQ68CZ1 1315 aa14.7□□□□□ -0.06
LINC00598-216ENST00000638163 SPATA31D1Q6ZQQ2 1576 aa14.7□□□□□ -0.06
LINC00598-216ENST00000638163 PIK3C2BO00750 1634 aa14.7□□□□□ -0.06
LINC00598-216ENST00000638163 CLTCL1P53675 1640 aa14.7□□□□□ -0.06
LINC00598-216ENST00000638163 ERVK-7P63135 1459 aa14.69□□□□□ -0.06
LINC00598-216ENST00000638163 PREX1Q8TCU6 1659 aa14.68□□□□□ -0.06
LINC00598-216ENST00000638163 KIF1BO60333 1816 aa14.68□□□□□ -0.06
LINC00598-216ENST00000638163 ADAMTSL3P82987 1691 aa14.68□□□□□ -0.06
LINC00598-216ENST00000638163 CLTCQ00610 1675 aaKnown RBP14.68□□□□□ -0.06
LINC00598-216ENST00000638163 ADGRB3O60242 1522 aa14.67□□□□□ -0.06
LINC00598-216ENST00000638163 SIGLEC1Q9BZZ2 1709 aa14.67□□□□□ -0.06
LINC00598-216ENST00000638163 MYOM2P54296 1465 aa14.67□□□□□ -0.06
LINC00598-216ENST00000638163 ZMYM3Q14202 1370 aa14.66□□□□□ -0.06
LINC00598-216ENST00000638163 RALGAPBQ86X10 1494 aa14.65□□□□□ -0.06
LINC00598-216ENST00000638163 SYNMO15061 1565 aa14.64□□□□□ -0.07
LINC00598-216ENST00000638163 MLECQ14165 292 aa14.64□□□□□ -0.07
LINC00598-216ENST00000638163 KDM5AP29375 1690 aaKnown RBP14.64□□□□□ -0.07
LINC00598-216ENST00000638163 ZNF316A6NFI3 1004 aaPredicted RBP14.63□□□□□ -0.07
LINC00598-216ENST00000638163 DCAF11Q8TEB1 546 aa14.63□□□□□ -0.07
LINC00598-216ENST00000638163 PRAG1Q86YV5 1406 aa14.63□□□□□ -0.07
LINC00598-216ENST00000638163 NLRP1Q9C000 1473 aa14.63□□□□□ -0.07
LINC00598-216ENST00000638163 ZFYVE9O95405 1425 aa14.61□□□□□ -0.07
LINC00598-216ENST00000638163 FER1L4A9Z1Z3 1794 aa14.61□□□□□ -0.07
LINC00598-216ENST00000638163 MADDQ8WXG6 1647 aa14.61□□□□□ -0.07
LINC00598-216ENST00000638163 LAMC1P11047 1609 aa14.6□□□□□ -0.07
LINC00598-216ENST00000638163 PTPRMP28827 1452 aa14.6□□□□□ -0.07
LINC00598-216ENST00000638163 TNRQ92752 1358 aa14.6□□□□□ -0.07
LINC00598-216ENST00000638163 VGFO15240 615 aaPredicted RBP14.59□□□□□ -0.07
LINC00598-216ENST00000638163 HDGFP51858 240 aaKnown RBP14.59□□□□□ -0.07
LINC00598-216ENST00000638163 EIF4G2P78344 907 aaKnown RBP eCLIP14.59□□□□□ -0.07
LINC00598-216ENST00000638163 GPRASP1Q5JY77 1395 aa14.59□□□□□ -0.07
LINC00598-216ENST00000638163 KIAA1210Q9ULL0 1709 aa14.58□□□□□ -0.07
LINC00598-216ENST00000638163 NRXN1Q9ULB1 1477 aa14.58□□□□□ -0.08
LINC00598-216ENST00000638163 RGL3Q3MIN7 710 aa14.58□□□□□ -0.08
LINC00598-216ENST00000638163 UGGT1Q9NYU2 1555 aa14.57□□□□□ -0.08
LINC00598-216ENST00000638163 SLC24A1O60721 1099 aa14.57□□□□□ -0.08
LINC00598-216ENST00000638163 TMEM131LA2VDJ0 1609 aa14.56□□□□□ -0.08
LINC00598-216ENST00000638163 RIMS1Q86UR5 1692 aaKnown RBP14.56□□□□□ -0.08
LINC00598-216ENST00000638163 IFT172Q9UG01 1749 aa14.56□□□□□ -0.08
LINC00598-216ENST00000638163 IDI1Q13907 227 aa14.56□□□□□ -0.08
LINC00598-216ENST00000638163 ZNF326Q5BKZ1 582 aaKnown RBP14.56□□□□□ -0.08
LINC00598-216ENST00000638163 STAG3Q9UJ98 1225 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms