RNA–Protein interactions for RNA: ENST00000638000.1

ARID1B-235, Transcript of AT-rich interaction domain 1B, humanhuman

TSL 5

Gene ARID1B, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1B-235ENST00000638000 SYCP2Q9BX26 1530 aa12.07□□□□□ -0.48
ARID1B-235ENST00000638000 SPATA31E1Q6ZUB1 1445 aa12.06□□□□□ -0.48
ARID1B-235ENST00000638000 IQGAP3Q86VI3 1631 aa12.06□□□□□ -0.48
ARID1B-235ENST00000638000 CCER2I3L3R5 266 aa12.05□□□□□ -0.48
ARID1B-235ENST00000638000 EFCAB2Q5VUJ9 269 aa12.05□□□□□ -0.48
ARID1B-235ENST00000638000 SAMD1Q6SPF0 538 aaPredicted RBP12.05□□□□□ -0.48
ARID1B-235ENST00000638000 POLR1AO95602 1720 aaPredicted RBP12.05□□□□□ -0.48
ARID1B-235ENST00000638000 ARID4BQ4LE39 1312 aaPredicted RBP12.05□□□□□ -0.48
ARID1B-235ENST00000638000 L3MBTL2Q969R5 705 aa12.04□□□□□ -0.48
ARID1B-235ENST00000638000 FAM135AQ9P2D6 1515 aa12.04□□□□□ -0.48
ARID1B-235ENST00000638000 NEURL4Q96JN8 1562 aa12.02□□□□□ -0.48
ARID1B-235ENST00000638000 NUP155O75694 1391 aa12.02□□□□□ -0.48
ARID1B-235ENST00000638000 EIF4G2P78344 907 aaKnown RBP eCLIP12.02□□□□□ -0.49
ARID1B-235ENST00000638000 ZNF777Q9ULD5 760 aaPredicted RBP12.02□□□□□ -0.49
ARID1B-235ENST00000638000 HAX1O00165 279 aa12.01□□□□□ -0.49
ARID1B-235ENST00000638000 SLC4A2P04920 1241 aa12.01□□□□□ -0.49
ARID1B-235ENST00000638000 HNRNPMP52272 730 aaKnown RBP eCLIP12□□□□□ -0.496e-7■■■■■ 27.1
ARID1B-235ENST00000638000 STAC3Q96MF2 364 aa12□□□□□ -0.49
ARID1B-235ENST00000638000 DEPDC5O75140 1603 aa12□□□□□ -0.49
ARID1B-235ENST00000638000 RALGAPBQ86X10 1494 aa12□□□□□ -0.49
ARID1B-235ENST00000638000 EIF2AK4Q9P2K8 1649 aaKnown RBP11.99□□□□□ -0.49
ARID1B-235ENST00000638000 ZBTB22O15209 634 aa11.99□□□□□ -0.49
ARID1B-235ENST00000638000 PKD2Q13563 968 aa11.99□□□□□ -0.49
ARID1B-235ENST00000638000 OSCARQ8IYS5 282 aa11.99□□□□□ -0.49
ARID1B-235ENST00000638000 INO80Q9ULG1 1556 aaPredicted RBP11.99□□□□□ -0.49
ARID1B-235ENST00000638000 ZFYVE16Q7Z3T8 1539 aa11.98□□□□□ -0.49
ARID1B-235ENST00000638000 CFAP74Q9C0B2 1584 aa11.98□□□□□ -0.49
ARID1B-235ENST00000638000 LAMC1P11047 1609 aa11.97□□□□□ -0.49
ARID1B-235ENST00000638000 VWDEQ8N2E2 1590 aa11.97□□□□□ -0.49
ARID1B-235ENST00000638000 FANCAO15360 1455 aa11.95□□□□□ -0.5
ARID1B-235ENST00000638000 AKT1S1Q96B36 256 aa11.94□□□□□ -0.5
ARID1B-235ENST00000638000 ASXL2Q76L83 1435 aa11.94□□□□□ -0.5
ARID1B-235ENST00000638000 GPRASP1Q5JY77 1395 aa11.94□□□□□ -0.5
ARID1B-235ENST00000638000 BCORL1Q5H9F3 1711 aa11.94□□□□□ -0.5
ARID1B-235ENST00000638000 HSPA5P11021 654 aaKnown RBP11.94□□□□□ -0.5
ARID1B-235ENST00000638000 KDM5CP41229 1560 aa11.93□□□□□ -0.5
ARID1B-235ENST00000638000 PTPRTO14522 1441 aa11.93□□□□□ -0.5
ARID1B-235ENST00000638000 TRAPPC8Q9Y2L5 1435 aa11.93□□□□□ -0.5
ARID1B-235ENST00000638000 DDX10Q13206 875 aaKnown RBP11.93□□□□□ -0.5
ARID1B-235ENST00000638000 NBPF8Q3BBV2 869 aa11.93□□□□□ -0.5
ARID1B-235ENST00000638000 PIP4P2Q8N4L2 257 aa11.93□□□□□ -0.5
ARID1B-235ENST00000638000 PLA2R1Q13018 1463 aa11.93□□□□□ -0.5
ARID1B-235ENST00000638000 WASHC2AQ641Q2 1341 aa11.92□□□□□ -0.5
ARID1B-235ENST00000638000 PRDM15P57071 1507 aaPredicted RBP11.92□□□□□ -0.5
ARID1B-235ENST00000638000 ROCK2O75116 1388 aaKnown RBP11.92□□□□□ -0.5
ARID1B-235ENST00000638000 CCDC7Q96M83 1385 aa11.92□□□□□ -0.5
ARID1B-235ENST00000638000 CCDC144AA2RUR9 1427 aa11.92□□□□□ -0.5
ARID1B-235ENST00000638000 CNTLNQ9NXG0 1405 aa11.92□□□□□ -0.5
ARID1B-235ENST00000638000 ANP32CO43423 234 aa11.92□□□□□ -0.5
ARID1B-235ENST00000638000 ATP7AQ04656 1500 aa11.92□□□□□ -0.5
ARID1B-235ENST00000638000 ZNF518AQ6AHZ1 1483 aa11.91□□□□□ -0.5
ARID1B-235ENST00000638000 LMTK2Q8IWU2 1503 aa11.91□□□□□ -0.5
ARID1B-235ENST00000638000 FOXD4L1Q9NU39 408 aa11.91□□□□□ -0.5
ARID1B-235ENST00000638000 TET3O43151 1660 aa11.9□□□□□ -0.5
ARID1B-235ENST00000638000 NEO1Q92859 1461 aa11.9□□□□□ -0.51
ARID1B-235ENST00000638000 MLH3Q9UHC1 1453 aa11.9□□□□□ -0.51
ARID1B-235ENST00000638000 TRPM2O94759 1503 aa11.89□□□□□ -0.51
ARID1B-235ENST00000638000 SPAG9O60271 1321 aaKnown RBP11.89□□□□□ -0.51
ARID1B-235ENST00000638000 ADGRL1O94910 1474 aa11.89□□□□□ -0.51
ARID1B-235ENST00000638000 POLA2Q14181 598 aa11.88□□□□□ -0.51
ARID1B-235ENST00000638000 DHX29Q7Z478 1369 aaKnown RBP11.88□□□□□ -0.51
ARID1B-235ENST00000638000 PRAG1Q86YV5 1406 aa11.88□□□□□ -0.51
ARID1B-235ENST00000638000 KTN1Q86UP2 1357 aaKnown RBP11.87□□□□□ -0.51
ARID1B-235ENST00000638000 TRPM1Q7Z4N2 1603 aa11.87□□□□□ -0.51
ARID1B-235ENST00000638000 RNF17Q9BXT8 1623 aaKnown RBP11.87□□□□□ -0.51
ARID1B-235ENST00000638000 GLI2P10070 1586 aa11.86□□□□□ -0.51
ARID1B-235ENST00000638000 USP47Q96K76 1375 aa11.86□□□□□ -0.51
ARID1B-235ENST00000638000 KCNH8Q96L42 1107 aa11.86□□□□□ -0.51
ARID1B-235ENST00000638000 SCAPERQ9BY12 1400 aa11.85□□□□□ -0.51
ARID1B-235ENST00000638000 NPM1P06748 294 aaKnown RBP eCLIP11.85□□□□□ -0.51
ARID1B-235ENST00000638000 POGZQ7Z3K3 1410 aa11.84□□□□□ -0.51
ARID1B-235ENST00000638000 KIDINS220Q9ULH0 1771 aa11.84□□□□□ -0.51
ARID1B-235ENST00000638000 GTF3C3Q9Y5Q9 886 aa11.84□□□□□ -0.51
ARID1B-235ENST00000638000 E9PCH4 1651 aa11.84□□□□□ -0.51
ARID1B-235ENST00000638000 MROH1Q8NDA8 1641 aa11.84□□□□□ -0.51
ARID1B-235ENST00000638000 A2MP01023 1474 aa11.83□□□□□ -0.52
ARID1B-235ENST00000638000 CEP152O94986 1710 aa11.83□□□□□ -0.52
ARID1B-235ENST00000638000 KANK1Q14678 1352 aa11.83□□□□□ -0.52
ARID1B-235ENST00000638000 KIF7Q2M1P5 1343 aa11.83□□□□□ -0.52
ARID1B-235ENST00000638000 SPHKAPQ2M3C7 1700 aa11.82□□□□□ -0.52
ARID1B-235ENST00000638000 KIAA1210Q9ULL0 1709 aa11.82□□□□□ -0.52
ARID1B-235ENST00000638000 CD109Q6YHK3 1445 aa11.82□□□□□ -0.52
ARID1B-235ENST00000638000 EFCAB6Q5THR3 1501 aa11.81□□□□□ -0.52
ARID1B-235ENST00000638000 WASHC2CQ9Y4E1 1318 aa11.8□□□□□ -0.52
ARID1B-235ENST00000638000 SLC24A1O60721 1099 aa11.8□□□□□ -0.52
ARID1B-235ENST00000638000 HECW2Q9P2P5 1572 aa11.8□□□□□ -0.52
ARID1B-235ENST00000638000 MAP3K4Q9Y6R4 1608 aa11.79□□□□□ -0.52
ARID1B-235ENST00000638000 C11orf95C9JLR9 678 aaPredicted RBP11.79□□□□□ -0.52
ARID1B-235ENST00000638000 REM2Q8IYK8 340 aaPredicted RBP11.79□□□□□ -0.52
ARID1B-235ENST00000638000 AFAP1Q8N556 730 aa11.79□□□□□ -0.52
ARID1B-235ENST00000638000 PRKRIP1Q9H875 184 aaPredicted RBP11.79□□□□□ -0.52
ARID1B-235ENST00000638000 MYOM2P54296 1465 aa11.79□□□□□ -0.52
ARID1B-235ENST00000638000 YTHDC1Q96MU7 727 aaKnown RBP11.77□□□□□ -0.52
ARID1B-235ENST00000638000 MADDQ8WXG6 1647 aa11.77□□□□□ -0.53
ARID1B-235ENST00000638000 DCAF11Q8TEB1 546 aa11.77□□□□□ -0.53
ARID1B-235ENST00000638000 HIRIP3Q9BW71 556 aaPredicted RBP11.77□□□□□ -0.53
ARID1B-235ENST00000638000 CARD11Q9BXL7 1154 aa11.77□□□□□ -0.53
ARID1B-235ENST00000638000 ARHGAP31Q2M1Z3 1444 aa11.76□□□□□ -0.53
ARID1B-235ENST00000638000 ZMYM4Q5VZL5 1548 aa11.76□□□□□ -0.53
ARID1B-235ENST00000638000 INSRP06213 1382 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms