RNA–Protein interactions for RNA: ENST00000637535.1

CACNB4-256, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 1,731 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-256	ENST00000637535	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.52	□□□□□ -0.73
CACNB4-256	ENST00000637535	TRIM26	Q12899	539 aa	Predicted RBP	10.52	□□□□□ -0.73
CACNB4-256	ENST00000637535	GGT6	Q6P531	493 aa		10.52	□□□□□ -0.73
CACNB4-256	ENST00000637535	ANP32E	Q9BTT0	268 aa		10.52	□□□□□ -0.73
CACNB4-256	ENST00000637535	SAMD9L	Q8IVG5	1584 aa		10.51	□□□□□ -0.73
CACNB4-256	ENST00000637535	RERE	Q9P2R6	1566 aa		10.51	□□□□□ -0.73
CACNB4-256	ENST00000637535	SYCP2	Q9BX26	1530 aa		10.51	□□□□□ -0.73
CACNB4-256	ENST00000637535	SOCS7	O14512	581 aa		10.51	□□□□□ -0.73
CACNB4-256	ENST00000637535	CASKIN1	Q8WXD9	1431 aa		10.51	□□□□□ -0.73
CACNB4-256	ENST00000637535	ZMYM3	Q14202	1370 aa		10.51	□□□□□ -0.73
CACNB4-256	ENST00000637535	PTPRT	O14522	1441 aa		10.5	□□□□□ -0.73
CACNB4-256	ENST00000637535	AGL	P35573	1532 aa		10.5	□□□□□ -0.73
CACNB4-256	ENST00000637535	CLTC	Q00610	1675 aa	Known RBP	10.5	□□□□□ -0.73
CACNB4-256	ENST00000637535	SPAG9	O60271	1321 aa	Known RBP	10.5	□□□□□ -0.73
CACNB4-256	ENST00000637535	NCOA1	Q15788	1441 aa		10.5	□□□□□ -0.73
CACNB4-256	ENST00000637535	SPATA31D1	Q6ZQQ2	1576 aa		10.49	□□□□□ -0.73
CACNB4-256	ENST00000637535	ZNF644	Q9H582	1327 aa	Predicted RBP	10.49	□□□□□ -0.73
CACNB4-256	ENST00000637535	ABCB7	O75027	752 aa		10.49	□□□□□ -0.73
CACNB4-256	ENST00000637535	CCDC18	Q5T9S5	1454 aa		10.48	□□□□□ -0.73
CACNB4-256	ENST00000637535	GPATCH8	Q9UKJ3	1502 aa	Known RBP	10.48	□□□□□ -0.73
CACNB4-256	ENST00000637535	UBAP1L	F5GYI3	381 aa		10.47	□□□□□ -0.73
CACNB4-256	ENST00000637535	CFDP1	Q9UEE9	299 aa	Predicted RBP	10.47	□□□□□ -0.73
CACNB4-256	ENST00000637535	POLA2	Q14181	598 aa		10.46	□□□□□ -0.74
CACNB4-256	ENST00000637535	ATP7A	Q04656	1500 aa		10.46	□□□□□ -0.74
CACNB4-256	ENST00000637535	CNTLN	Q9NXG0	1405 aa		10.46	□□□□□ -0.74
CACNB4-256	ENST00000637535	FYCO1	Q9BQS8	1478 aa		10.44	□□□□□ -0.74
CACNB4-256	ENST00000637535	MYO3A	Q8NEV4	1616 aa		10.44	□□□□□ -0.74
CACNB4-256	ENST00000637535	MROH2A	A6NES4	1674 aa		10.44	□□□□□ -0.74
CACNB4-256	ENST00000637535	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.44	□□□□□ -0.74
CACNB4-256	ENST00000637535	A2M	P01023	1474 aa		10.43	□□□□□ -0.74
CACNB4-256	ENST00000637535	CCNB3	Q8WWL7	1395 aa		10.43	□□□□□ -0.74
CACNB4-256	ENST00000637535	PIP4K2B	P78356	416 aa		10.43	□□□□□ -0.74
CACNB4-256	ENST00000637535	INO80	Q9ULG1	1556 aa	Predicted RBP	10.42	□□□□□ -0.74
CACNB4-256	ENST00000637535	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.42	□□□□□ -0.74
CACNB4-256	ENST00000637535	NPAT	Q14207	1427 aa		10.42	□□□□□ -0.74
CACNB4-256	ENST00000637535	PTPRK	Q15262	1439 aa		10.42	□□□□□ -0.74
CACNB4-256	ENST00000637535	PLXNC1	O60486	1568 aa		10.41	□□□□□ -0.74
CACNB4-256	ENST00000637535	MTUS2	Q5JR59	1369 aa		10.41	□□□□□ -0.74
CACNB4-256	ENST00000637535	ZNF142	P52746	1687 aa	Predicted RBP	10.4	□□□□□ -0.75
CACNB4-256	ENST00000637535	KIF3B	O15066	747 aa		10.39	□□□□□ -0.75
CACNB4-256	ENST00000637535	HSPA1L	P34931	641 aa		10.39	□□□□□ -0.75
CACNB4-256	ENST00000637535	PKD2	Q13563	968 aa		10.39	□□□□□ -0.75
CACNB4-256	ENST00000637535	TCOF1	Q13428	1488 aa	Known RBP	10.39	□□□□□ -0.75
CACNB4-256	ENST00000637535	KIAA1107	Q9UPP5	1409 aa		10.38	□□□□□ -0.75
CACNB4-256	ENST00000637535	TIAM1	Q13009	1591 aa		10.38	□□□□□ -0.75
CACNB4-256	ENST00000637535	DNMT1	P26358	1616 aa	Known RBP	10.38	□□□□□ -0.75
CACNB4-256	ENST00000637535	IQSEC2	Q5JU85	1478 aa		10.38	□□□□□ -0.75
CACNB4-256	ENST00000637535	ADGB	Q8N7X0	1667 aa		10.37	□□□□□ -0.75
CACNB4-256	ENST00000637535	MBD5	Q9P267	1494 aa		10.37	□□□□□ -0.75
CACNB4-256	ENST00000637535	PLA2R1	Q13018	1463 aa		10.36	□□□□□ -0.75
CACNB4-256	ENST00000637535	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	10.36	□□□□□ -0.75
CACNB4-256	ENST00000637535	PLEKHH2	Q8IVE3	1493 aa		10.36	□□□□□ -0.75
CACNB4-256	ENST00000637535	CFAP65	Q6ZU64	1925 aa	Known RBP	10.35	□□□□□ -0.75
CACNB4-256	ENST00000637535	A2ML1	A8K2U0	1454 aa		10.35	□□□□□ -0.75
CACNB4-256	ENST00000637535	DHX29	Q7Z478	1369 aa	Known RBP	10.34	□□□□□ -0.75
CACNB4-256	ENST00000637535	WASHC2C	Q9Y4E1	1318 aa		10.34	□□□□□ -0.75
CACNB4-256	ENST00000637535	NEURL4	Q96JN8	1562 aa		10.34	□□□□□ -0.75
CACNB4-256	ENST00000637535	POLR1A	O95602	1720 aa	Predicted RBP	10.34	□□□□□ -0.75
CACNB4-256	ENST00000637535	TNR	Q92752	1358 aa		10.34	□□□□□ -0.75
CACNB4-256	ENST00000637535	SLC24A1	O60721	1099 aa		10.32	□□□□□ -0.76
CACNB4-256	ENST00000637535	EHBP1L1	Q8N3D4	1523 aa		10.31	□□□□□ -0.76
CACNB4-256	ENST00000637535	CLSPN	Q9HAW4	1339 aa		10.31	□□□□□ -0.76
CACNB4-256	ENST00000637535	CAMSAP2	Q08AD1	1489 aa		10.31	□□□□□ -0.76
CACNB4-256	ENST00000637535	SHANK2	Q9UPX8	1470 aa		10.31	□□□□□ -0.76
CACNB4-256	ENST00000637535	TOM1	O60784	492 aa		10.31	□□□□□ -0.76
CACNB4-256	ENST00000637535	ANKLE2	Q86XL3	938 aa		10.31	□□□□□ -0.76
CACNB4-256	ENST00000637535	MED1	Q15648	1581 aa	Predicted RBP	10.31	□□□□□ -0.76
CACNB4-256	ENST00000637535	NCOA2	Q15596	1464 aa		10.31	□□□□□ -0.76
CACNB4-256	ENST00000637535	CCDC141	Q6ZP82	1450 aa		10.3	□□□□□ -0.76
CACNB4-256	ENST00000637535	RTEL1-TNFRSF6B	F6WH68	1400 aa		10.3	□□□□□ -0.76
CACNB4-256	ENST00000637535	STRCP1	A6NGW2	1772 aa		10.29	□□□□□ -0.76
CACNB4-256	ENST00000637535	PZP	P20742	1482 aa		10.29	□□□□□ -0.76
CACNB4-256	ENST00000637535	UGGT1	Q9NYU2	1555 aa		10.29	□□□□□ -0.76
CACNB4-256	ENST00000637535	CEP162	Q5TB80	1403 aa		10.29	□□□□□ -0.76
CACNB4-256	ENST00000637535	MIA2	Q96PC5	1412 aa		10.29	□□□□□ -0.76
CACNB4-256	ENST00000637535	KDM5D	Q9BY66	1539 aa		10.29	□□□□□ -0.76
CACNB4-256	ENST00000637535	ALK	Q9UM73	1620 aa		10.29	□□□□□ -0.76
CACNB4-256	ENST00000637535	VWDE	Q8N2E2	1590 aa		10.29	□□□□□ -0.76
CACNB4-256	ENST00000637535	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.28	□□□□□ -0.76
CACNB4-256	ENST00000637535	NPHP4	O75161	1426 aa	Predicted RBP	10.28	□□□□□ -0.76
CACNB4-256	ENST00000637535	LOC105371045	A0A1W2PR82	267 aa		10.27	□□□□□ -0.77
CACNB4-256	ENST00000637535	TSPY4	P0CV99	314 aa		10.27	□□□□□ -0.77
CACNB4-256	ENST00000637535	TSPY10	P0CW01	314 aa		10.27	□□□□□ -0.77
CACNB4-256	ENST00000637535	CPS1	P31327	1500 aa		10.26	□□□□□ -0.77
CACNB4-256	ENST00000637535	FAM135A	Q9P2D6	1515 aa		10.25	□□□□□ -0.77
CACNB4-256	ENST00000637535	KANK4	Q5T7N3	995 aa	Predicted RBP	10.25	□□□□□ -0.77
CACNB4-256	ENST00000637535	IQGAP1	P46940	1657 aa		10.25	□□□□□ -0.77
CACNB4-256	ENST00000637535	CEP152	O94986	1710 aa		10.25	□□□□□ -0.77
CACNB4-256	ENST00000637535	LTK	P29376	864 aa		10.24	□□□□□ -0.77
CACNB4-256	ENST00000637535	RBM33	Q96EV2	1170 aa	Known RBP	10.24	□□□□□ -0.77
CACNB4-256	ENST00000637535	LRRC7	Q96NW7	1537 aa		10.23	□□□□□ -0.77
CACNB4-256	ENST00000637535	ZBTB12	Q9Y330	459 aa	Predicted RBP	10.23	□□□□□ -0.77
CACNB4-256	ENST00000637535	NLRP1	Q9C000	1473 aa		10.23	□□□□□ -0.77
CACNB4-256	ENST00000637535	ABCC3	O15438	1527 aa		10.23	□□□□□ -0.77
CACNB4-256	ENST00000637535	MED14	O60244	1454 aa		10.22	□□□□□ -0.77
CACNB4-256	ENST00000637535	RSPH4A	Q5TD94	716 aa		10.22	□□□□□ -0.77
CACNB4-256	ENST00000637535	DIEXF	Q68CQ4	756 aa	Known RBP	10.21	□□□□□ -0.77
CACNB4-256	ENST00000637535	ARHGEF5	Q12774	1597 aa		10.21	□□□□□ -0.77
CACNB4-256	ENST00000637535	DEPDC5	O75140	1603 aa		10.21	□□□□□ -0.77
CACNB4-256	ENST00000637535	ERVK-7	P63135	1459 aa		10.21	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms