RNA–Protein interactions for RNA: ENST00000637293.1

GABRB3-223, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-223ENST00000637293 HIC1Q14526 733 aa3.75□□□□□ -1.81
GABRB3-223ENST00000637293 FCHSD2O94868 740 aa3.74□□□□□ -1.81
GABRB3-223ENST00000637293 MS4A1P11836 297 aa3.74□□□□□ -1.81
GABRB3-223ENST00000637293 TCF3P15923 654 aa3.74□□□□□ -1.81
GABRB3-223ENST00000637293 PSEN1P49768 467 aa3.74□□□□□ -1.81
GABRB3-223ENST00000637293 PDIA6Q15084 440 aa3.74□□□□□ -1.81
GABRB3-223ENST00000637293 SF3A1Q15459 793 aaKnown RBP3.74□□□□□ -1.81
GABRB3-223ENST00000637293 TMEM259Q4ZIN3 620 aa3.74□□□□□ -1.81
GABRB3-223ENST00000637293 FBXO22Q8NEZ5 403 aa3.74□□□□□ -1.81
GABRB3-223ENST00000637293 UBXN4Q92575 508 aa3.74□□□□□ -1.81
GABRB3-223ENST00000637293 GLMNQ92990 594 aa3.74□□□□□ -1.81
GABRB3-223ENST00000637293 MRRFQ96E11 262 aaKnown RBP3.74□□□□□ -1.81
GABRB3-223ENST00000637293 BCL11AQ9H165 835 aa3.74□□□□□ -1.81
GABRB3-223ENST00000637293 VRTNQ9H8Y1 702 aa3.74□□□□□ -1.81
GABRB3-223ENST00000637293 GNEQ9Y223 722 aaKnown RBP3.74□□□□□ -1.81
GABRB3-223ENST00000637293 CLCN1P35523 988 aa3.73□□□□□ -1.81
GABRB3-223ENST00000637293 CERS3Q8IU89 383 aa3.73□□□□□ -1.81
GABRB3-223ENST00000637293 SIRT1Q96EB6 747 aa3.73□□□□□ -1.81
GABRB3-223ENST00000637293 ANKRD62A6NC57 917 aa3.72□□□□□ -1.81
GABRB3-223ENST00000637293 SOCS7O14512 581 aa3.72□□□□□ -1.81
GABRB3-223ENST00000637293 ZC3H6P61129 1189 aaKnown RBP3.72□□□□□ -1.81
GABRB3-223ENST00000637293 CCER1Q8TC90 406 aaPredicted RBP3.72□□□□□ -1.81
GABRB3-223ENST00000637293 OXER1Q8TDS5 423 aa3.72□□□□□ -1.81
GABRB3-223ENST00000637293 CADPSQ9ULU8 1353 aa3.72□□□□□ -1.81
GABRB3-223ENST00000637293 DPYSL4O14531 572 aa3.71□□□□□ -1.82
GABRB3-223ENST00000637293 MNX1P50219 401 aaPredicted RBP3.71□□□□□ -1.82
GABRB3-223ENST00000637293 PPP1R15BQ5SWA1 713 aa3.71□□□□□ -1.82
GABRB3-223ENST00000637293 NOL8Q76FK4 1167 aaKnown RBP3.71□□□□□ -1.82
GABRB3-223ENST00000637293 GDPD2Q9HCC8 539 aa3.71□□□□□ -1.82
GABRB3-223ENST00000637293 KIAA1522Q9P206 1035 aaPredicted RBP3.71□□□□□ -1.82
GABRB3-223ENST00000637293 PHF8Q9UPP1 1060 aa3.71□□□□□ -1.82
GABRB3-223ENST00000637293 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.71□□□□□ -1.82
GABRB3-223ENST00000637293 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.7□□□□□ -1.82
GABRB3-223ENST00000637293 RFX1P22670 979 aa3.7□□□□□ -1.82
GABRB3-223ENST00000637293 RFC5P40937 340 aa3.7□□□□□ -1.82
GABRB3-223ENST00000637293 ABL2P42684 1182 aa3.7□□□□□ -1.82
GABRB3-223ENST00000637293 DIXDC1Q155Q3 683 aa3.7□□□□□ -1.82
GABRB3-223ENST00000637293 TICAM2Q86XR7 235 aa3.7□□□□□ -1.82
GABRB3-223ENST00000637293 EFCAB3Q8N7B9 438 aa3.7□□□□□ -1.82
GABRB3-223ENST00000637293 ZNF579Q8NAF0 562 aaKnown RBP3.7□□□□□ -1.82
GABRB3-223ENST00000637293 PROCA1Q8NCQ7 364 aaPredicted RBP3.7□□□□□ -1.82
GABRB3-223ENST00000637293 SPDYE1Q8NFV5 336 aaPredicted RBP3.7□□□□□ -1.82
GABRB3-223ENST00000637293 ZNF592Q92610 1267 aa3.7□□□□□ -1.82
GABRB3-223ENST00000637293 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.7□□□□□ -1.82
GABRB3-223ENST00000637293 HIRIP3Q9BW71 556 aaPredicted RBP3.7□□□□□ -1.82
GABRB3-223ENST00000637293 BCL2L13Q9BXK5 485 aa3.7□□□□□ -1.82
GABRB3-223ENST00000637293 GPCPD1Q9NPB8 672 aa3.7□□□□□ -1.82
GABRB3-223ENST00000637293 SNRKQ9NRH2 765 aa3.7□□□□□ -1.82
GABRB3-223ENST00000637293 CREBZFQ9NS37 354 aa3.7□□□□□ -1.82
GABRB3-223ENST00000637293 POLR3EQ9NVU0 708 aa3.7□□□□□ -1.82
GABRB3-223ENST00000637293 PLEKHD1A6NEE1 506 aa3.69□□□□□ -1.82
GABRB3-223ENST00000637293 PRR29P0C7W0 189 aa3.69□□□□□ -1.82
GABRB3-223ENST00000637293 ZNF16P17020 682 aaPredicted RBP3.69□□□□□ -1.82
GABRB3-223ENST00000637293 WASHC4Q2M389 1173 aa3.69□□□□□ -1.82
GABRB3-223ENST00000637293 ZNF326Q5BKZ1 582 aaKnown RBP3.69□□□□□ -1.82
GABRB3-223ENST00000637293 TXNDC2Q86VQ3 553 aa3.69□□□□□ -1.82
GABRB3-223ENST00000637293 BEGAINQ9BUH8 593 aa3.69□□□□□ -1.82
GABRB3-223ENST00000637293 PPP1R1BQ9UD71 204 aaPredicted RBP3.69□□□□□ -1.82
GABRB3-223ENST00000637293 PCDHB8Q9UN66 801 aa3.69□□□□□ -1.82
GABRB3-223ENST00000637293 PCDHB13Q9Y5F0 798 aa3.69□□□□□ -1.82
GABRB3-223ENST00000637293 ZC3H4Q9UPT8 1303 aaKnown RBP3.69□□□□□ -1.82
GABRB3-223ENST00000637293 GRXCR2A6NFK2 248 aa3.68□□□□□ -1.82
GABRB3-223ENST00000637293 ATG7O95352 703 aa3.68□□□□□ -1.82
GABRB3-223ENST00000637293 VAMP1P23763 118 aa3.68□□□□□ -1.82
GABRB3-223ENST00000637293 SSTR3P32745 418 aaPredicted RBP3.68□□□□□ -1.82
GABRB3-223ENST00000637293 CLK2P49760 499 aaKnown RBP3.68□□□□□ -1.82
GABRB3-223ENST00000637293 SRPK2P78362 688 aaKnown RBP3.68□□□□□ -1.82
GABRB3-223ENST00000637293 HDGFL1Q5TGJ6 251 aa3.68□□□□□ -1.82
GABRB3-223ENST00000637293 CABP2Q9NPB3 220 aa3.68□□□□□ -1.82
GABRB3-223ENST00000637293 POM121CA8CG34 1229 aa3.67□□□□□ -1.82
GABRB3-223ENST00000637293 KDM4AO75164 1064 aa3.67□□□□□ -1.82
GABRB3-223ENST00000637293 CFAP70Q5T0N1 1121 aa3.67□□□□□ -1.82
GABRB3-223ENST00000637293 TMUB1Q9BVT8 246 aa3.67□□□□□ -1.82
GABRB3-223ENST00000637293 PPP1R12CQ9BZL4 782 aa3.67□□□□□ -1.82
GABRB3-223ENST00000637293 MYH16Q9H6N6 1097 aa3.67□□□□□ -1.82
GABRB3-223ENST00000637293 GPHNQ9NQX3 736 aaPredicted RBP3.67□□□□□ -1.82
GABRB3-223ENST00000637293 HMGB1P1B2RPK0 211 aaPredicted RBP3.66□□□□□ -1.82
GABRB3-223ENST00000637293 FECHP22830 423 aa3.66□□□□□ -1.82
GABRB3-223ENST00000637293 NAALADL2Q58DX5 795 aa3.66□□□□□ -1.82
GABRB3-223ENST00000637293 MYSM1Q5VVJ2 828 aa3.66□□□□□ -1.82
GABRB3-223ENST00000637293 PPP2R2DQ66LE6 453 aa3.66□□□□□ -1.82
GABRB3-223ENST00000637293 NOP9Q86U38 636 aaKnown RBP3.66□□□□□ -1.82
GABRB3-223ENST00000637293 MTMR14Q8NCE2 650 aa3.66□□□□□ -1.82
GABRB3-223ENST00000637293 GIPC2Q8TF65 315 aa3.66□□□□□ -1.82
GABRB3-223ENST00000637293 REPIN1Q9BWE0 567 aaKnown RBP3.66□□□□□ -1.82
GABRB3-223ENST00000637293 TMEM88BA6NKF7 163 aa3.65□□□□□ -1.83
GABRB3-223ENST00000637293 MARCH6O60337 910 aa3.65□□□□□ -1.83
GABRB3-223ENST00000637293 NEFLP07196 543 aa3.65□□□□□ -1.83
GABRB3-223ENST00000637293 ARID4AP29374 1257 aaPredicted RBP3.65□□□□□ -1.83
GABRB3-223ENST00000637293 LMOD1P29536 600 aaPredicted RBP3.65□□□□□ -1.83
GABRB3-223ENST00000637293 MDM2Q00987 491 aaPredicted RBP3.65□□□□□ -1.83
GABRB3-223ENST00000637293 C1QBPQ07021 282 aaKnown RBP3.65□□□□□ -1.83
GABRB3-223ENST00000637293 GORABQ5T7V8 394 aa3.65□□□□□ -1.83
GABRB3-223ENST00000637293 DNAJC14Q6Y2X3 702 aaPredicted RBP3.65□□□□□ -1.83
GABRB3-223ENST00000637293 METTL14Q9HCE5 456 aaKnown RBP3.65□□□□□ -1.83
GABRB3-223ENST00000637293 EMILIN3Q9NT22 766 aa3.65□□□□□ -1.83
GABRB3-223ENST00000637293 TMA7Q9Y2S6 64 aaKnown RBP3.65□□□□□ -1.83
GABRB3-223ENST00000637293 CARNS1A5YM72 827 aa3.64□□□□□ -1.83
GABRB3-223ENST00000637293 PALM3A6NDB9 673 aaPredicted RBP3.64□□□□□ -1.83
GABRB3-223ENST00000637293 OSBPP22059 807 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms