RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 BCORL1Q5H9F3 1711 aa20.66■□□□□ 0.9
CACNA1A-235ENST00000637004 ADCY10Q96PN6 1610 aa20.66■□□□□ 0.9
CACNA1A-235ENST00000637004 DDRGK1Q96HY6 314 aa20.65■□□□□ 0.9
CACNA1A-235ENST00000637004 PDE3BQ13370 1112 aa20.64■□□□□ 0.9
CACNA1A-235ENST00000637004 RALBP1Q15311 655 aa20.64■□□□□ 0.9
CACNA1A-235ENST00000637004 MYBBP1AQ9BQG0 1328 aaKnown RBP20.64■□□□□ 0.9
CACNA1A-235ENST00000637004 CDK13Q14004 1512 aaKnown RBP20.64■□□□□ 0.89
CACNA1A-235ENST00000637004 DNMT1P26358 1616 aaKnown RBP20.64■□□□□ 0.89
CACNA1A-235ENST00000637004 NUP153P49790 1475 aaKnown RBP20.63■□□□□ 0.89
CACNA1A-235ENST00000637004 SENP3-EIF4A1A0A087X0R7 540 aa20.62■□□□□ 0.89
CACNA1A-235ENST00000637004 RTN4Q9NQC3 1192 aaKnown RBP20.62■□□□□ 0.89
CACNA1A-235ENST00000637004 KIF14Q15058 1648 aa20.62■□□□□ 0.89
CACNA1A-235ENST00000637004 KDM5CP41229 1560 aa20.61■□□□□ 0.89
CACNA1A-235ENST00000637004 ZNF326Q5BKZ1 582 aaKnown RBP20.61■□□□□ 0.89
CACNA1A-235ENST00000637004 PZPP20742 1482 aa20.6■□□□□ 0.89
CACNA1A-235ENST00000637004 ATP10BO94823 1461 aa20.6■□□□□ 0.89
CACNA1A-235ENST00000637004 ABCC2Q92887 1545 aa20.6■□□□□ 0.89
CACNA1A-235ENST00000637004 KIAA1107Q9UPP5 1409 aa20.59■□□□□ 0.89
CACNA1A-235ENST00000637004 ABCA8O94911 1581 aa20.59■□□□□ 0.89
CACNA1A-235ENST00000637004 EIF5BO60841 1220 aaKnown RBP20.58■□□□□ 0.89
CACNA1A-235ENST00000637004 RAPGEF6Q8TEU7 1601 aa20.58■□□□□ 0.88
CACNA1A-235ENST00000637004 UHRF1BP1Q6BDS2 1440 aa20.56■□□□□ 0.88
CACNA1A-235ENST00000637004 PLEKHD1A6NEE1 506 aa20.56■□□□□ 0.88
CACNA1A-235ENST00000637004 FAM69CQ0P6D2 419 aa20.55■□□□□ 0.88
CACNA1A-235ENST00000637004 RALGAPBQ86X10 1494 aa20.55■□□□□ 0.88
CACNA1A-235ENST00000637004 GSE1Q14687 1217 aa20.54■□□□□ 0.88
CACNA1A-235ENST00000637004 CARD11Q9BXL7 1154 aa20.54■□□□□ 0.88
CACNA1A-235ENST00000637004 ASXL2Q76L83 1435 aa20.53■□□□□ 0.88
CACNA1A-235ENST00000637004 NLRP13Q86W25 1043 aa20.53■□□□□ 0.88
CACNA1A-235ENST00000637004 ZNF644Q9H582 1327 aaPredicted RBP20.52■□□□□ 0.88
CACNA1A-235ENST00000637004 PKD2Q13563 968 aa20.5■□□□□ 0.87
CACNA1A-235ENST00000637004 UHRF1BP1LA0JNW5 1464 aa20.49■□□□□ 0.87
CACNA1A-235ENST00000637004 ZCCHC11Q5TAX3 1644 aaKnown RBP20.48■□□□□ 0.87
CACNA1A-235ENST00000637004 DAXXQ9UER7 740 aaPredicted RBP20.48■□□□□ 0.87
CACNA1A-235ENST00000637004 NFKBIBQ15653 356 aa20.47■□□□□ 0.87
CACNA1A-235ENST00000637004 ARHGEF12Q9NZN5 1544 aa20.47■□□□□ 0.87
CACNA1A-235ENST00000637004 ST20-MTHFSA0A0A6YYL1 179 aa20.46■□□□□ 0.87
CACNA1A-235ENST00000637004 INSRP06213 1382 aa20.45■□□□□ 0.86
CACNA1A-235ENST00000637004 BRPF3Q9ULD4 1205 aa20.45■□□□□ 0.86
CACNA1A-235ENST00000637004 PARD3Q8TEW0 1356 aa20.44■□□□□ 0.86
CACNA1A-235ENST00000637004 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.44■□□□□ 0.86
CACNA1A-235ENST00000637004 ADGRL2O95490 1459 aa20.43■□□□□ 0.86
CACNA1A-235ENST00000637004 CRBNQ96SW2 442 aa20.42■□□□□ 0.86
CACNA1A-235ENST00000637004 CDCA7LQ96GN5 454 aa20.41■□□□□ 0.86
CACNA1A-235ENST00000637004 ANKRD30AQ9BXX3 1397 aa20.41■□□□□ 0.86
CACNA1A-235ENST00000637004 CFDP1Q9UEE9 299 aaPredicted RBP20.41■□□□□ 0.86
CACNA1A-235ENST00000637004 E9PCH4 1651 aa20.41■□□□□ 0.86
CACNA1A-235ENST00000637004 ADGBQ8N7X0 1667 aa20.41■□□□□ 0.86
CACNA1A-235ENST00000637004 CAMSAP2Q08AD1 1489 aa20.4■□□□□ 0.86
CACNA1A-235ENST00000637004 ZMYM4Q5VZL5 1548 aa20.4■□□□□ 0.86
CACNA1A-235ENST00000637004 PLIN1O60240 522 aa20.4■□□□□ 0.86
CACNA1A-235ENST00000637004 ZNF777Q9ULD5 760 aaPredicted RBP20.39■□□□□ 0.85
CACNA1A-235ENST00000637004 WDR7Q9Y4E6 1490 aa20.39■□□□□ 0.85
CACNA1A-235ENST00000637004 FRAT1Q92837 279 aaPredicted RBP20.38■□□□□ 0.85
CACNA1A-235ENST00000637004 PLEKHH2Q8IVE3 1493 aa20.37■□□□□ 0.85
CACNA1A-235ENST00000637004 ANKRD50Q9ULJ7 1429 aa20.37■□□□□ 0.85
CACNA1A-235ENST00000637004 CENPQQ7L2Z9 268 aaPredicted RBP20.36■□□□□ 0.85
CACNA1A-235ENST00000637004 BLMP54132 1417 aaPredicted RBP20.35■□□□□ 0.85
CACNA1A-235ENST00000637004 FAM161AQ3B820 660 aa20.35■□□□□ 0.85
CACNA1A-235ENST00000637004 KDM2BQ8NHM5 1336 aa20.35■□□□□ 0.85
CACNA1A-235ENST00000637004 KDM2AQ9Y2K7 1162 aa20.35■□□□□ 0.85
CACNA1A-235ENST00000637004 NUP155O75694 1391 aa20.34■□□□□ 0.85
CACNA1A-235ENST00000637004 TROQ12816 1431 aaPredicted RBP20.33■□□□□ 0.85
CACNA1A-235ENST00000637004 SKAP1Q86WV1 359 aa20.33■□□□□ 0.84
CACNA1A-235ENST00000637004 DCAF11Q8TEB1 546 aa20.33■□□□□ 0.84
CACNA1A-235ENST00000637004 ITSN2Q9NZM3 1697 aa20.32■□□□□ 0.84
CACNA1A-235ENST00000637004 PER1O15534 1290 aaPredicted RBP20.32■□□□□ 0.84
CACNA1A-235ENST00000637004 SLC4A3P48751 1232 aa20.32■□□□□ 0.84
CACNA1A-235ENST00000637004 ABCC10Q5T3U5 1492 aa20.3■□□□□ 0.84
CACNA1A-235ENST00000637004 GPATCH8Q9UKJ3 1502 aaKnown RBP20.3■□□□□ 0.84
CACNA1A-235ENST00000637004 CROCC2H7BZ55 1655 aa20.29■□□□□ 0.84
CACNA1A-235ENST00000637004 TSPOAP1O95153 1857 aa20.28■□□□□ 0.84
CACNA1A-235ENST00000637004 PKNOX2Q96KN3 472 aa20.28■□□□□ 0.84
CACNA1A-235ENST00000637004 C8orf34Q49A92 452 aa20.27■□□□□ 0.84
CACNA1A-235ENST00000637004 CD109Q6YHK3 1445 aa20.27■□□□□ 0.84
CACNA1A-235ENST00000637004 C20orf194Q5TEA3 1177 aa20.26■□□□□ 0.83
CACNA1A-235ENST00000637004 FAM43AQ8N2R8 423 aa20.26■□□□□ 0.83
CACNA1A-235ENST00000637004 KDM5DQ9BY66 1539 aa20.26■□□□□ 0.83
CACNA1A-235ENST00000637004 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.26■□□□□ 0.83
CACNA1A-235ENST00000637004 RSPH6AQ9H0K4 717 aa20.26■□□□□ 0.83
CACNA1A-235ENST00000637004 DIP2BQ9P265 1576 aa20.24■□□□□ 0.83
CACNA1A-235ENST00000637004 CC2D1BQ5T0F9 858 aaKnown RBP20.24■□□□□ 0.83
CACNA1A-235ENST00000637004 FRAT2O75474 233 aaPredicted RBP20.23■□□□□ 0.83
CACNA1A-235ENST00000637004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.23■□□□□ 0.83
CACNA1A-235ENST00000637004 SHANK2Q9UPX8 1470 aa20.22■□□□□ 0.83
CACNA1A-235ENST00000637004 TTC37Q6PGP7 1564 aa20.22■□□□□ 0.83
CACNA1A-235ENST00000637004 PLEKHG5O94827 1062 aa20.21■□□□□ 0.83
CACNA1A-235ENST00000637004 COL17A1Q9UMD9 1497 aaPredicted RBP20.2■□□□□ 0.83
CACNA1A-235ENST00000637004 PRAG1Q86YV5 1406 aa20.2■□□□□ 0.82
CACNA1A-235ENST00000637004 RAPGEF3O95398 923 aa20.2■□□□□ 0.82
CACNA1A-235ENST00000637004 C9orf84Q5VXU9 1444 aa20.2■□□□□ 0.82
CACNA1A-235ENST00000637004 GPRASP1Q5JY77 1395 aa20.18■□□□□ 0.82
CACNA1A-235ENST00000637004 HNRNPMP52272 730 aaKnown RBP eCLIP20.18■□□□□ 0.82
CACNA1A-235ENST00000637004 KIF13AQ9H1H9 1805 aa20.18■□□□□ 0.82
CACNA1A-235ENST00000637004 PANK3Q9H999 370 aa20.18■□□□□ 0.82
CACNA1A-235ENST00000637004 DUSP27Q5VZP5 1158 aa20.17■□□□□ 0.82
CACNA1A-235ENST00000637004 TSPY4P0CV99 314 aa20.17■□□□□ 0.82
CACNA1A-235ENST00000637004 TSPY10P0CW01 314 aa20.17■□□□□ 0.82
CACNA1A-235ENST00000637004 TRPM1Q7Z4N2 1603 aa20.17■□□□□ 0.82
CACNA1A-235ENST00000637004 ADAMTS8Q9UP79 889 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms