RNA–Protein interactions for RNA: ENST00000636994.1

PNKP-227, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-227ENST00000636994 PLA2R1Q13018 1463 aa27.03■■□□□ 1.92
PNKP-227ENST00000636994 KDM5DQ9BY66 1539 aa27.01■■□□□ 1.91
PNKP-227ENST00000636994 FAM135AQ9P2D6 1515 aa27.01■■□□□ 1.91
PNKP-227ENST00000636994 PKD2Q13563 968 aa27■■□□□ 1.91
PNKP-227ENST00000636994 MIA2Q96PC5 1412 aa26.99■■□□□ 1.91
PNKP-227ENST00000636994 WASHC2CQ9Y4E1 1318 aa26.99■■□□□ 1.91
PNKP-227ENST00000636994 FBXO31Q5XUX0 539 aaPredicted RBP26.99■■□□□ 1.91
PNKP-227ENST00000636994 A2ML1A8K2U0 1454 aa26.99■■□□□ 1.91
PNKP-227ENST00000636994 TCOF1Q13428 1488 aaKnown RBP26.99■■□□□ 1.91
PNKP-227ENST00000636994 MYOM3Q5VTT5 1437 aa26.99■■□□□ 1.91
PNKP-227ENST00000636994 MAST1Q9Y2H9 1570 aa26.98■■□□□ 1.91
PNKP-227ENST00000636994 PZPP20742 1482 aa26.98■■□□□ 1.91
PNKP-227ENST00000636994 DNMT1P26358 1616 aaKnown RBP26.96■■□□□ 1.91
PNKP-227ENST00000636994 TNRQ92752 1358 aa26.95■■□□□ 1.9
PNKP-227ENST00000636994 IQSEC2Q5JU85 1478 aa26.93■■□□□ 1.9
PNKP-227ENST00000636994 RNF17Q9BXT8 1623 aaKnown RBP26.91■■□□□ 1.9
PNKP-227ENST00000636994 ZNF335Q9H4Z2 1342 aaPredicted RBP26.9■■□□□ 1.9
PNKP-227ENST00000636994 EIF2AK4Q9P2K8 1649 aaKnown RBP26.87■■□□□ 1.89
PNKP-227ENST00000636994 APLP2Q06481 763 aa26.87■■□□□ 1.89
PNKP-227ENST00000636994 ABCC3O15438 1527 aa26.85■■□□□ 1.89
PNKP-227ENST00000636994 ZC3H13Q5T200 1668 aaKnown RBP26.83■■□□□ 1.89
PNKP-227ENST00000636994 NLRP1Q9C000 1473 aa26.83■■□□□ 1.89
PNKP-227ENST00000636994 POLR1AO95602 1720 aaPredicted RBP26.83■■□□□ 1.89
PNKP-227ENST00000636994 DUOX2Q9NRD8 1548 aa26.82■■□□□ 1.88
PNKP-227ENST00000636994 MROH1Q8NDA8 1641 aa26.82■■□□□ 1.88
PNKP-227ENST00000636994 PTPN23Q9H3S7 1636 aa26.81■■□□□ 1.88
PNKP-227ENST00000636994 ABCC5O15440 1437 aa26.81■■□□□ 1.88
PNKP-227ENST00000636994 NEURL4Q96JN8 1562 aa26.8■■□□□ 1.88
PNKP-227ENST00000636994 THEMISQ8N1K5 641 aaPredicted RBP26.8■■□□□ 1.88
PNKP-227ENST00000636994 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.79■■□□□ 1.88
PNKP-227ENST00000636994 SHANK2Q9UPX8 1470 aa26.79■■□□□ 1.88
PNKP-227ENST00000636994 UGGT1Q9NYU2 1555 aa26.79■■□□□ 1.88
PNKP-227ENST00000636994 CROCC2H7BZ55 1655 aa26.79■■□□□ 1.88
PNKP-227ENST00000636994 SPATA31D1Q6ZQQ2 1576 aa26.78■■□□□ 1.88
PNKP-227ENST00000636994 KIF15Q9NS87 1388 aa26.77■■□□□ 1.88
PNKP-227ENST00000636994 ANKLE2Q86XL3 938 aa26.77■■□□□ 1.88
PNKP-227ENST00000636994 CEP152O94986 1710 aa26.76■■□□□ 1.88
PNKP-227ENST00000636994 CFAP65Q6ZU64 1925 aaKnown RBP26.76■■□□□ 1.87
PNKP-227ENST00000636994 ERVK-7P63135 1459 aa26.74■■□□□ 1.87
PNKP-227ENST00000636994 FGD6Q6ZV73 1430 aa26.74■■□□□ 1.87
PNKP-227ENST00000636994 RRP7BPQ9NSQ0 103 aa26.74■■□□□ 1.87
PNKP-227ENST00000636994 DAPK1P53355 1430 aa26.73■■□□□ 1.87
PNKP-227ENST00000636994 ERBINQ96RT1 1412 aa26.73■■□□□ 1.87
PNKP-227ENST00000636994 UBAP1LF5GYI3 381 aa26.71■■□□□ 1.87
PNKP-227ENST00000636994 MED14O60244 1454 aa26.7■■□□□ 1.87
PNKP-227ENST00000636994 DEPDC5O75140 1603 aa26.7■■□□□ 1.86
PNKP-227ENST00000636994 PRDM15P57071 1507 aaPredicted RBP26.7■■□□□ 1.86
PNKP-227ENST00000636994 NPHP4O75161 1426 aaPredicted RBP26.67■■□□□ 1.86
PNKP-227ENST00000636994 CPS1P31327 1500 aa26.66■■□□□ 1.86
PNKP-227ENST00000636994 ARHGAP31Q2M1Z3 1444 aa26.65■■□□□ 1.86
PNKP-227ENST00000636994 DISP3Q9P2K9 1392 aa26.65■■□□□ 1.86
PNKP-227ENST00000636994 VWDEQ8N2E2 1590 aa26.64■■□□□ 1.86
PNKP-227ENST00000636994 CHIC2Q9UKJ5 165 aa26.64■■□□□ 1.86
PNKP-227ENST00000636994 ANKRD30AQ9BXX3 1397 aa26.63■■□□□ 1.85
PNKP-227ENST00000636994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.63■■□□□ 1.85
PNKP-227ENST00000636994 IQGAP1P46940 1657 aa26.63■■□□□ 1.85
PNKP-227ENST00000636994 UBR1Q8IWV7 1749 aa26.62■■□□□ 1.85
PNKP-227ENST00000636994 KANK1Q14678 1352 aa26.58■■□□□ 1.85
PNKP-227ENST00000636994 ADGRL2O95490 1459 aa26.55■■□□□ 1.84
PNKP-227ENST00000636994 LMTK2Q8IWU2 1503 aa26.55■■□□□ 1.84
PNKP-227ENST00000636994 ARHGAP23Q9P227 1491 aa26.54■■□□□ 1.84
PNKP-227ENST00000636994 TOM1O60784 492 aa26.53■■□□□ 1.84
PNKP-227ENST00000636994 FAM50AQ14320 339 aaKnown RBP26.53■■□□□ 1.84
PNKP-227ENST00000636994 ILDR2Q71H61 639 aa26.53■■□□□ 1.84
PNKP-227ENST00000636994 SCAF11Q99590 1463 aaKnown RBP26.53■■□□□ 1.84
PNKP-227ENST00000636994 SLIT1O75093 1534 aa26.53■■□□□ 1.84
PNKP-227ENST00000636994 STRCP1A6NGW2 1772 aa26.53■■□□□ 1.84
PNKP-227ENST00000636994 LTKP29376 864 aa26.52■■□□□ 1.84
PNKP-227ENST00000636994 PIK3C2BO00750 1634 aa26.5■■□□□ 1.83
PNKP-227ENST00000636994 TXNDC2Q86VQ3 553 aa26.5■■□□□ 1.83
PNKP-227ENST00000636994 PIP4K2BP78356 416 aa26.49■■□□□ 1.83
PNKP-227ENST00000636994 SCAF1Q9H7N4 1312 aaKnown RBP26.48■■□□□ 1.83
PNKP-227ENST00000636994 IDI1Q13907 227 aa26.46■■□□□ 1.83
PNKP-227ENST00000636994 LRRC7Q96NW7 1537 aa26.45■■□□□ 1.83
PNKP-227ENST00000636994 EID1Q9Y6B2 187 aa26.45■■□□□ 1.82
PNKP-227ENST00000636994 TMEM2Q9UHN6 1383 aa26.45■■□□□ 1.82
PNKP-227ENST00000636994 EFCAB6Q5THR3 1501 aa26.44■■□□□ 1.82
PNKP-227ENST00000636994 ALKQ9UM73 1620 aa26.44■■□□□ 1.82
PNKP-227ENST00000636994 HSPA1LP34931 641 aa26.44■■□□□ 1.82
PNKP-227ENST00000636994 STAG3Q9UJ98 1225 aa26.44■■□□□ 1.82
PNKP-227ENST00000636994 ANKRD50Q9ULJ7 1429 aa26.44■■□□□ 1.82
PNKP-227ENST00000636994 SYNMO15061 1565 aa26.44■■□□□ 1.82
PNKP-227ENST00000636994 KDM5AP29375 1690 aaKnown RBP26.44■■□□□ 1.82
PNKP-227ENST00000636994 NOS1P29475 1434 aa26.43■■□□□ 1.82
PNKP-227ENST00000636994 SLC52A1Q9NWF4 448 aa26.36■■□□□ 1.81
PNKP-227ENST00000636994 RPRD2Q5VT52 1461 aaKnown RBP26.36■■□□□ 1.81
PNKP-227ENST00000636994 SOCS7O14512 581 aa26.35■■□□□ 1.81
PNKP-227ENST00000636994 ADGRB3O60242 1522 aa26.34■■□□□ 1.81
PNKP-227ENST00000636994 TET3O43151 1660 aa26.32■■□□□ 1.8
PNKP-227ENST00000636994 XIRP1Q702N8 1843 aaKnown RBP26.32■■□□□ 1.8
PNKP-227ENST00000636994 ROCK1Q13464 1354 aa26.31■■□□□ 1.8
PNKP-227ENST00000636994 UNC13BO14795 1591 aa26.3■■□□□ 1.8
PNKP-227ENST00000636994 GCC2Q8IWJ2 1684 aa26.28■■□□□ 1.8
PNKP-227ENST00000636994 SLC26A8Q96RN1 970 aa26.27■■□□□ 1.8
PNKP-227ENST00000636994 MYO5BQ9ULV0 1848 aa26.25■■□□□ 1.79
PNKP-227ENST00000636994 MED1Q15648 1581 aaPredicted RBP26.25■■□□□ 1.79
PNKP-227ENST00000636994 KCNA6P17658 529 aa26.25■■□□□ 1.79
PNKP-227ENST00000636994 PPARGC1BQ86YN6 1023 aaKnown RBP26.23■■□□□ 1.79
PNKP-227ENST00000636994 ZFYVE9O95405 1425 aa26.22■■□□□ 1.79
PNKP-227ENST00000636994 E9PCH4 1651 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms