RNA–Protein interactions for RNA: ENST00000636861.1

CHD2-225, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 146 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-225ENST00000636861 DIEXFQ68CQ4 756 aaKnown RBP5.9□□□□□ -1.46
CHD2-225ENST00000636861 SHPRHQ149N8 1683 aa5.9□□□□□ -1.47
CHD2-225ENST00000636861 AFF2P51816 1311 aa5.9□□□□□ -1.47
CHD2-225ENST00000636861 SCAF11Q99590 1463 aaKnown RBP5.89□□□□□ -1.47
CHD2-225ENST00000636861 IQGAP2Q13576 1575 aa5.89□□□□□ -1.47
CHD2-225ENST00000636861 MROH2AA6NES4 1674 aa5.88□□□□□ -1.47
CHD2-225ENST00000636861 MEX3CQ5U5Q3 659 aaKnown RBP5.88□□□□□ -1.47
CHD2-225ENST00000636861 RTEL1-TNFRSF6BF6WH68 1400 aa5.88□□□□□ -1.47
CHD2-225ENST00000636861 WRNQ14191 1432 aaPredicted RBP eCLIP5.88□□□□□ -1.47
CHD2-225ENST00000636861 RBM6P78332 1123 aaKnown RBP5.87□□□□□ -1.47
CHD2-225ENST00000636861 IQGAP1P46940 1657 aa5.86□□□□□ -1.47
CHD2-225ENST00000636861 AGLP35573 1532 aa5.86□□□□□ -1.47
CHD2-225ENST00000636861 TNS2Q63HR2 1409 aa5.86□□□□□ -1.47
CHD2-225ENST00000636861 SUPT5HO00267 1087 aaKnown RBP5.86□□□□□ -1.47
CHD2-225ENST00000636861 ERICH6BQ5W0A0 696 aa5.86□□□□□ -1.47
CHD2-225ENST00000636861 TNS4Q8IZW8 715 aa5.86□□□□□ -1.47
CHD2-225ENST00000636861 DIP2CQ9Y2E4 1556 aa5.85□□□□□ -1.47
CHD2-225ENST00000636861 SPATA31A6Q5VVP1 1343 aa5.85□□□□□ -1.47
CHD2-225ENST00000636861 GIGYF1O75420 1035 aaPredicted RBP5.85□□□□□ -1.47
CHD2-225ENST00000636861 QTRT2Q9H974 415 aaKnown RBP5.85□□□□□ -1.47
CHD2-225ENST00000636861 ZC3H13Q5T200 1668 aaKnown RBP5.85□□□□□ -1.47
CHD2-225ENST00000636861 MED14O60244 1454 aa5.84□□□□□ -1.47
CHD2-225ENST00000636861 BLMP54132 1417 aaPredicted RBP5.84□□□□□ -1.47
CHD2-225ENST00000636861 CCDC125Q86Z20 511 aa5.84□□□□□ -1.47
CHD2-225ENST00000636861 CCER1Q8TC90 406 aaPredicted RBP5.84□□□□□ -1.47
CHD2-225ENST00000636861 SHANK3Q9BYB0 1731 aa5.84□□□□□ -1.47
CHD2-225ENST00000636861 ABCA6Q8N139 1617 aa5.84□□□□□ -1.47
CHD2-225ENST00000636861 TNRC18O15417 2968 aaPredicted RBP5.84□□□□□ -1.48
CHD2-225ENST00000636861 REREQ9P2R6 1566 aa5.84□□□□□ -1.48
CHD2-225ENST00000636861 A2ML1A8K2U0 1454 aa5.83□□□□□ -1.48
CHD2-225ENST00000636861 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.83□□□□□ -1.48
CHD2-225ENST00000636861 DAXXQ9UER7 740 aaPredicted RBP5.83□□□□□ -1.48
CHD2-225ENST00000636861 DEPDC5O75140 1603 aa5.83□□□□□ -1.48
CHD2-225ENST00000636861 DIP2AQ14689 1571 aa5.83□□□□□ -1.48
CHD2-225ENST00000636861 MAP3K1Q13233 1512 aa5.83□□□□□ -1.48
CHD2-225ENST00000636861 BRWD3Q6RI45 1802 aa5.83□□□□□ -1.48
CHD2-225ENST00000636861 NPHP4O75161 1426 aaPredicted RBP5.82□□□□□ -1.48
CHD2-225ENST00000636861 FGD6Q6ZV73 1430 aa5.82□□□□□ -1.48
CHD2-225ENST00000636861 PDE4DIPQ5VU43 2346 aa5.82□□□□□ -1.48
CHD2-225ENST00000636861 BIVM-ERCC5R4GMW8 1640 aa5.82□□□□□ -1.48
CHD2-225ENST00000636861 A0A0C4DFX4 3053 aa5.82□□□□□ -1.48
CHD2-225ENST00000636861 CFAP74Q9C0B2 1584 aa5.82□□□□□ -1.48
CHD2-225ENST00000636861 UGGT2Q9NYU1 1516 aa5.82□□□□□ -1.48
CHD2-225ENST00000636861 ATP10BO94823 1461 aa5.82□□□□□ -1.48
CHD2-225ENST00000636861 CUL9Q8IWT3 2517 aa5.81□□□□□ -1.48
CHD2-225ENST00000636861 ARID3CA6NKF2 412 aa5.81□□□□□ -1.48
CHD2-225ENST00000636861 R3HDM1Q15032 1099 aaKnown RBP5.81□□□□□ -1.48
CHD2-225ENST00000636861 CSRNP3Q8WYN3 585 aa5.81□□□□□ -1.48
CHD2-225ENST00000636861 EHMT2Q96KQ7 1210 aa5.81□□□□□ -1.48
CHD2-225ENST00000636861 CLTCQ00610 1675 aaKnown RBP5.81□□□□□ -1.48
CHD2-225ENST00000636861 ITSN2Q9NZM3 1697 aa5.81□□□□□ -1.48
CHD2-225ENST00000636861 CNTLNQ9NXG0 1405 aa5.81□□□□□ -1.48
CHD2-225ENST00000636861 ZMYM3Q14202 1370 aa5.8□□□□□ -1.48
CHD2-225ENST00000636861 ABCC1P33527 1531 aa5.79□□□□□ -1.48
CHD2-225ENST00000636861 HSPA6P17066 643 aa5.79□□□□□ -1.48
CHD2-225ENST00000636861 PLCH2O75038 1416 aa5.78□□□□□ -1.48
CHD2-225ENST00000636861 UBE2Q2Q8WVN8 375 aa5.78□□□□□ -1.48
CHD2-225ENST00000636861 SCAPERQ9BY12 1400 aa5.78□□□□□ -1.48
CHD2-225ENST00000636861 NINLQ9Y2I6 1382 aa5.78□□□□□ -1.48
CHD2-225ENST00000636861 ZNF316A6NFI3 1004 aaPredicted RBP5.77□□□□□ -1.49
CHD2-225ENST00000636861 EIF5BO60841 1220 aaKnown RBP5.77□□□□□ -1.49
CHD2-225ENST00000636861 FAM161AQ3B820 660 aa5.77□□□□□ -1.49
CHD2-225ENST00000636861 DNAJC5GQ8N7S2 189 aa5.77□□□□□ -1.49
CHD2-225ENST00000636861 AHDC1Q5TGY3 1603 aaPredicted RBP5.77□□□□□ -1.49
CHD2-225ENST00000636861 LRRC9Q6ZRR7 1453 aa5.77□□□□□ -1.49
CHD2-225ENST00000636861 KDM5DQ9BY66 1539 aa5.76□□□□□ -1.49
CHD2-225ENST00000636861 TSHZ2Q9NRE2 1034 aa5.76□□□□□ -1.49
CHD2-225ENST00000636861 IGF1RP08069 1367 aa5.76□□□□□ -1.49
CHD2-225ENST00000636861 KIAA1210Q9ULL0 1709 aa5.76□□□□□ -1.49
CHD2-225ENST00000636861 UNC13BO14795 1591 aa5.76□□□□□ -1.49
CHD2-225ENST00000636861 C8orf37Q96NL8 207 aa5.75□□□□□ -1.49
CHD2-225ENST00000636861 ATRNO75882 1429 aa5.74□□□□□ -1.49
CHD2-225ENST00000636861 NGLY1Q96IV0 654 aa5.74□□□□□ -1.49
CHD2-225ENST00000636861 WWC3Q9ULE0 1092 aa5.74□□□□□ -1.49
CHD2-225ENST00000636861 SUPT16HQ9Y5B9 1047 aaKnown RBP5.74□□□□□ -1.49
CHD2-225ENST00000636861 TMEM94Q12767 1356 aa5.74□□□□□ -1.49
CHD2-225ENST00000636861 TIAM1Q13009 1591 aa5.74□□□□□ -1.49
CHD2-225ENST00000636861 ANKLE2Q86XL3 938 aa5.73□□□□□ -1.49
CHD2-225ENST00000636861 ESF1Q9H501 851 aaKnown RBP5.73□□□□□ -1.49
CHD2-225ENST00000636861 KIF14Q15058 1648 aa5.73□□□□□ -1.49
CHD2-225ENST00000636861 DCAF8L1A6NGE4 600 aa5.72□□□□□ -1.49
CHD2-225ENST00000636861 ATP7AQ04656 1500 aa5.72□□□□□ -1.49
CHD2-225ENST00000636861 MAST1Q9Y2H9 1570 aa5.72□□□□□ -1.49
CHD2-225ENST00000636861 SPHKAPQ2M3C7 1700 aa5.71□□□□□ -1.49
CHD2-225ENST00000636861 MYOM1P52179 1685 aa5.71□□□□□ -1.5
CHD2-225ENST00000636861 RALGAPBQ86X10 1494 aa5.71□□□□□ -1.5
CHD2-225ENST00000636861 KDM5AP29375 1690 aaKnown RBP5.7□□□□□ -1.5
CHD2-225ENST00000636861 YTHDC1Q96MU7 727 aaKnown RBP5.7□□□□□ -1.5
CHD2-225ENST00000636861 SLAIN2Q9P270 581 aa5.7□□□□□ -1.5
CHD2-225ENST00000636861 NRKQ7Z2Y5 1582 aa5.7□□□□□ -1.5
CHD2-225ENST00000636861 ARHGAP23Q9P227 1491 aa5.7□□□□□ -1.5
CHD2-225ENST00000636861 TNS1Q9HBL0 1735 aaKnown RBP5.69□□□□□ -1.5
CHD2-225ENST00000636861 NEFLP07196 543 aa5.69□□□□□ -1.5
CHD2-225ENST00000636861 GLIPR1L2Q4G1C9 344 aa5.69□□□□□ -1.5
CHD2-225ENST00000636861 KIDINS220Q9ULH0 1771 aa5.69□□□□□ -1.5
CHD2-225ENST00000636861 FANCIQ9NVI1 1328 aa5.69□□□□□ -1.5
CHD2-225ENST00000636861 GLI3P10071 1580 aa5.68□□□□□ -1.5
CHD2-225ENST00000636861 EN1Q05925 392 aaPredicted RBP5.68□□□□□ -1.5
CHD2-225ENST00000636861 AFAP1Q8N556 730 aa5.68□□□□□ -1.5
CHD2-225ENST00000636861 CAMSAP2Q08AD1 1489 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms