RNA–Protein interactions for RNA: ENST00000636754.1

LGI1-222, Transcript of leucine rich glioma inactivated 1, human

TSL 5

Gene LGI1, Length 2,200 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGI1-222	ENST00000636754	FAM9A	Q8IZU1	332 aa	Predicted RBP	5.86	□□□□□ -1.47
LGI1-222	ENST00000636754	KDM5B	Q9UGL1	1544 aa		5.85	□□□□□ -1.47
LGI1-222	ENST00000636754	GLI2	P10070	1586 aa		5.84	□□□□□ -1.47
LGI1-222	ENST00000636754	PTPRG	P23470	1445 aa		5.84	□□□□□ -1.47
LGI1-222	ENST00000636754	ERCC6L2	Q5T890	1561 aa		5.84	□□□□□ -1.47
LGI1-222	ENST00000636754	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	5.84	□□□□□ -1.47
LGI1-222	ENST00000636754	ADCY10	Q96PN6	1610 aa		5.84	□□□□□ -1.47
LGI1-222	ENST00000636754	UACA	Q9BZF9	1416 aa		5.84	□□□□□ -1.47
LGI1-222	ENST00000636754	HOXB3	P14651	431 aa	Predicted RBP	5.84	□□□□□ -1.47
LGI1-222	ENST00000636754	NUBP1	P53384	320 aa		5.84	□□□□□ -1.47
LGI1-222	ENST00000636754	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	5.84	□□□□□ -1.47
LGI1-222	ENST00000636754	BBX	Q8WY36	941 aa	Predicted RBP	5.84	□□□□□ -1.47
LGI1-222	ENST00000636754	FMN1	Q68DA7	1419 aa		5.83	□□□□□ -1.48
LGI1-222	ENST00000636754	TULP1	O00294	542 aa	Predicted RBP	5.83	□□□□□ -1.48
LGI1-222	ENST00000636754	PLB1	Q6P1J6	1458 aa		5.83	□□□□□ -1.48
LGI1-222	ENST00000636754	RIMBP2	O15034	1052 aa		5.83	□□□□□ -1.48
LGI1-222	ENST00000636754	CFAP44	Q96MT7	982 aa		5.83	□□□□□ -1.48
LGI1-222	ENST00000636754	RAPGEF6	Q8TEU7	1601 aa		5.82	□□□□□ -1.48
LGI1-222	ENST00000636754	VARS2	Q5ST30	1063 aa	Known RBP	5.82	□□□□□ -1.48
LGI1-222	ENST00000636754	HECW1	Q76N89	1606 aa		5.82	□□□□□ -1.48
LGI1-222	ENST00000636754	DAXX	Q9UER7	740 aa	Predicted RBP	5.82	□□□□□ -1.48
LGI1-222	ENST00000636754	CCDC18	Q5T9S5	1454 aa		5.81	□□□□□ -1.48
LGI1-222	ENST00000636754	ZSWIM6	Q9HCJ5	1215 aa		5.8	□□□□□ -1.48
LGI1-222	ENST00000636754	FYCO1	Q9BQS8	1478 aa		5.8	□□□□□ -1.48
LGI1-222	ENST00000636754	ZCCHC11	Q5TAX3	1644 aa	Known RBP	5.8	□□□□□ -1.48
LGI1-222	ENST00000636754	ARHGAP35	Q9NRY4	1499 aa		5.8	□□□□□ -1.48
LGI1-222	ENST00000636754	GOLGA2	Q08379	1002 aa		5.79	□□□□□ -1.48
LGI1-222	ENST00000636754	MAP3K1	Q13233	1512 aa		5.79	□□□□□ -1.48
LGI1-222	ENST00000636754	ABCC10	Q5T3U5	1492 aa		5.79	□□□□□ -1.48
LGI1-222	ENST00000636754	PDCD7	Q8N8D1	485 aa	Known RBP	5.79	□□□□□ -1.48
LGI1-222	ENST00000636754	ARAP3	Q8WWN8	1544 aa		5.79	□□□□□ -1.48
LGI1-222	ENST00000636754	DIP2B	Q9P265	1576 aa		5.78	□□□□□ -1.48
LGI1-222	ENST00000636754	CFAP43	Q8NDM7	1665 aa		5.78	□□□□□ -1.48
LGI1-222	ENST00000636754	CASKIN1	Q8WXD9	1431 aa		5.78	□□□□□ -1.48
LGI1-222	ENST00000636754	ARX	Q96QS3	562 aa		5.78	□□□□□ -1.48
LGI1-222	ENST00000636754	MKRN3	Q13064	507 aa	Known RBP	5.78	□□□□□ -1.48
LGI1-222	ENST00000636754	IFFO2	Q5TF58	517 aa		5.78	□□□□□ -1.48
LGI1-222	ENST00000636754	TSHZ2	Q9NRE2	1034 aa		5.78	□□□□□ -1.48
LGI1-222	ENST00000636754	GTF3C3	Q9Y5Q9	886 aa		5.78	□□□□□ -1.48
LGI1-222	ENST00000636754	PHLDB1	Q86UU1	1377 aa		5.78	□□□□□ -1.48
LGI1-222	ENST00000636754	WDR7	Q9Y4E6	1490 aa		5.77	□□□□□ -1.49
LGI1-222	ENST00000636754	PYGB	P11216	843 aa		5.77	□□□□□ -1.49
LGI1-222	ENST00000636754	CLIP1	P30622	1438 aa		5.77	□□□□□ -1.49
LGI1-222	ENST00000636754	CFAP74	Q9C0B2	1584 aa		5.77	□□□□□ -1.49
LGI1-222	ENST00000636754	NUP153	P49790	1475 aa	Known RBP	5.77	□□□□□ -1.49
LGI1-222	ENST00000636754	DCAF8	Q5TAQ9	597 aa		5.76	□□□□□ -1.49
LGI1-222	ENST00000636754	MAP3K4	Q9Y6R4	1608 aa		5.76	□□□□□ -1.49
LGI1-222	ENST00000636754	KIF13A	Q9H1H9	1805 aa		5.76	□□□□□ -1.49
LGI1-222	ENST00000636754	ABCA9	Q8IUA7	1624 aa		5.76	□□□□□ -1.49
LGI1-222	ENST00000636754	ANKRD13D	Q6ZTN6	518 aa		5.76	□□□□□ -1.49
LGI1-222	ENST00000636754	PCDHB8	Q9UN66	801 aa		5.76	□□□□□ -1.49
LGI1-222	ENST00000636754	MAGI3	Q5TCQ9	1506 aa		5.76	□□□□□ -1.49
LGI1-222	ENST00000636754	TEX14	Q8IWB6	1497 aa		5.76	□□□□□ -1.49
LGI1-222	ENST00000636754	CYB5RL	Q6IPT4	315 aa		5.75	□□□□□ -1.49
LGI1-222	ENST00000636754	EPRS	P07814	1512 aa	Known RBP	5.75	□□□□□ -1.49
LGI1-222	ENST00000636754	ATP10B	O94823	1461 aa		5.75	□□□□□ -1.49
LGI1-222	ENST00000636754	FHOD3	Q2V2M9	1422 aa		5.74	□□□□□ -1.49
LGI1-222	ENST00000636754	CEP162	Q5TB80	1403 aa		5.74	□□□□□ -1.49
LGI1-222	ENST00000636754	ASXL2	Q76L83	1435 aa		5.74	□□□□□ -1.49
LGI1-222	ENST00000636754	ECM2	O94769	699 aa	Predicted RBP	5.74	□□□□□ -1.49
LGI1-222	ENST00000636754	SPRYD3	Q8NCJ5	442 aa		5.74	□□□□□ -1.49
LGI1-222	ENST00000636754	UBTF	P17480	764 aa	Known RBP	5.74	□□□□□ -1.49
LGI1-222	ENST00000636754	LSM11	P83369	360 aa	Known RBP eCLIP	5.74	□□□□□ -1.49
LGI1-222	ENST00000636754	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	5.74	□□□□□ -1.49
LGI1-222	ENST00000636754	PCF11	O94913	1555 aa	Known RBP	5.73	□□□□□ -1.49
LGI1-222	ENST00000636754	VPS8	Q8N3P4	1428 aa		5.73	□□□□□ -1.49
LGI1-222	ENST00000636754	NEO1	Q92859	1461 aa		5.73	□□□□□ -1.49
LGI1-222	ENST00000636754		G3V3G9	751 aa		5.72	□□□□□ -1.49
LGI1-222	ENST00000636754	EHBP1L1	Q8N3D4	1523 aa		5.72	□□□□□ -1.49
LGI1-222	ENST00000636754	KIF14	Q15058	1648 aa		5.72	□□□□□ -1.49
LGI1-222	ENST00000636754	CDK11A	Q9UQ88	783 aa	Predicted RBP	5.72	□□□□□ -1.49
LGI1-222	ENST00000636754	TRO	Q12816	1431 aa	Predicted RBP	5.72	□□□□□ -1.49
LGI1-222	ENST00000636754	PBX2	P40425	430 aa		5.71	□□□□□ -1.49
LGI1-222	ENST00000636754	PPRC1	Q5VV67	1664 aa	Known RBP	5.71	□□□□□ -1.5
LGI1-222	ENST00000636754	NBR1	Q14596	966 aa		5.71	□□□□□ -1.5
LGI1-222	ENST00000636754	RGL2	O15211	777 aa		5.7	□□□□□ -1.5
LGI1-222	ENST00000636754	ZNF467	Q7Z7K2	595 aa	Predicted RBP	5.7	□□□□□ -1.5
LGI1-222	ENST00000636754	LRRIQ1	Q96JM4	1722 aa		5.69	□□□□□ -1.5
LGI1-222	ENST00000636754	ITSN2	Q9NZM3	1697 aa		5.69	□□□□□ -1.5
LGI1-222	ENST00000636754	TIAM1	Q13009	1591 aa		5.69	□□□□□ -1.5
LGI1-222	ENST00000636754	MYO5C	Q9NQX4	1742 aa		5.69	□□□□□ -1.5
LGI1-222	ENST00000636754	KLHL34	Q8N239	644 aa		5.68	□□□□□ -1.5
LGI1-222	ENST00000636754	SPOCK2	Q92563	424 aa		5.68	□□□□□ -1.5
LGI1-222	ENST00000636754	PREX2	Q70Z35	1606 aa		5.68	□□□□□ -1.5
LGI1-222	ENST00000636754	PLEKHH2	Q8IVE3	1493 aa		5.68	□□□□□ -1.5
LGI1-222	ENST00000636754	PLEKHD1	A6NEE1	506 aa		5.67	□□□□□ -1.5
LGI1-222	ENST00000636754		Q6ZNB5	142 aa		5.67	□□□□□ -1.5
LGI1-222	ENST00000636754	ZMYM4	Q5VZL5	1548 aa		5.67	□□□□□ -1.5
LGI1-222	ENST00000636754	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
LGI1-222	ENST00000636754	ERICH6	Q7L0X2	663 aa		5.67	□□□□□ -1.5
LGI1-222	ENST00000636754	SUPT6H	Q7KZ85	1726 aa	Known RBP	5.67	□□□□□ -1.5
LGI1-222	ENST00000636754	MAGI2	Q86UL8	1455 aa		5.67	□□□□□ -1.5
LGI1-222	ENST00000636754	PLCH2	O75038	1416 aa		5.67	□□□□□ -1.5
LGI1-222	ENST00000636754	CD109	Q6YHK3	1445 aa		5.67	□□□□□ -1.5
LGI1-222	ENST00000636754	CDK13	Q14004	1512 aa	Known RBP	5.66	□□□□□ -1.5
LGI1-222	ENST00000636754	ILDR1	Q86SU0	546 aa	Predicted RBP	5.66	□□□□□ -1.5
LGI1-222	ENST00000636754	BOLA1	Q9Y3E2	137 aa		5.66	□□□□□ -1.5
LGI1-222	ENST00000636754	RERE	Q9P2R6	1566 aa		5.65	□□□□□ -1.5
LGI1-222	ENST00000636754	KDM6B	O15054	1643 aa		5.65	□□□□□ -1.5
LGI1-222	ENST00000636754		A0A0G2JS52	829 aa		5.65	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms