RNA–Protein interactions for RNA: ENST00000636709.1

CHRNA7-219, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

Gene CHRNA7, Length 7,722 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-219ENST00000636709 FYB1O15117 783 aa11.09□□□□□ -0.63
CHRNA7-219ENST00000636709 SF3B2Q13435 895 aaKnown RBP11.09□□□□□ -0.63
CHRNA7-219ENST00000636709 ELL2O00472 640 aaPredicted RBP11.09□□□□□ -0.63
CHRNA7-219ENST00000636709 MFAP1P55081 439 aaKnown RBP11.09□□□□□ -0.63
CHRNA7-219ENST00000636709 TPM4P67936 248 aa11.09□□□□□ -0.63
CHRNA7-219ENST00000636709 NUTM2BA6NNL0 878 aaPredicted RBP11.09□□□□□ -0.63
CHRNA7-219ENST00000636709 NUTM2EB1AL46 878 aaPredicted RBP11.09□□□□□ -0.63
CHRNA7-219ENST00000636709 NUTM2AQ8IVF1 878 aaPredicted RBP11.09□□□□□ -0.63
CHRNA7-219ENST00000636709 NUP155O75694 1391 aa11.09□□□□□ -0.63
CHRNA7-219ENST00000636709 PIP4K2BP78356 416 aa11.08□□□□□ -0.63
CHRNA7-219ENST00000636709 SLC4A3P48751 1232 aa11.08□□□□□ -0.64
CHRNA7-219ENST00000636709 RRP7AQ9Y3A4 280 aaKnown RBP11.08□□□□□ -0.64
CHRNA7-219ENST00000636709 APPP05067 770 aa11.08□□□□□ -0.64
CHRNA7-219ENST00000636709 TPD52L1Q16890 204 aaPredicted RBP11.08□□□□□ -0.64
CHRNA7-219ENST00000636709 RBM33Q96EV2 1170 aaKnown RBP11.08□□□□□ -0.64
CHRNA7-219ENST00000636709 CARMIL1Q5VZK9 1371 aa11.08□□□□□ -0.64
CHRNA7-219ENST00000636709 MTMR7Q9Y216 660 aa11.07□□□□□ -0.64
CHRNA7-219ENST00000636709 AKAP17AQ02040 695 aaKnown RBP11.07□□□□□ -0.64
CHRNA7-219ENST00000636709 RILPL2Q969X0 211 aa11.07□□□□□ -0.64
CHRNA7-219ENST00000636709 FAM177BA6PVY3 158 aa11.07□□□□□ -0.64
CHRNA7-219ENST00000636709 NUTM2GQ5VZR2 741 aa11.07□□□□□ -0.64
CHRNA7-219ENST00000636709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.07□□□□□ -0.64
CHRNA7-219ENST00000636709 ATF3P18847 181 aa11.07□□□□□ -0.64
CHRNA7-219ENST00000636709 HTATSF1O43719 755 aaKnown RBP11.06□□□□□ -0.64
CHRNA7-219ENST00000636709 FOXD4L6Q3SYB3 417 aaPredicted RBP11.06□□□□□ -0.64
CHRNA7-219ENST00000636709 FOXD4L3Q6VB84 417 aaPredicted RBP11.06□□□□□ -0.64
CHRNA7-219ENST00000636709 CECR2Q9BXF3 1484 aa11.06□□□□□ -0.64
CHRNA7-219ENST00000636709 CCAR1Q8IX12 1150 aaKnown RBP11.06□□□□□ -0.64
CHRNA7-219ENST00000636709 SF3A1Q15459 793 aaKnown RBP11.06□□□□□ -0.64
CHRNA7-219ENST00000636709 HSPA5P11021 654 aaKnown RBP11.06□□□□□ -0.64
CHRNA7-219ENST00000636709 EIF3AQ14152 1382 aaKnown RBP11.05□□□□□ -0.64
CHRNA7-219ENST00000636709 EEA1Q15075 1411 aa11.05□□□□□ -0.64
CHRNA7-219ENST00000636709 PPP4R2Q9NY27 417 aa11.05□□□□□ -0.64
CHRNA7-219ENST00000636709 SLKQ9H2G2 1235 aaPredicted RBP11.05□□□□□ -0.64
CHRNA7-219ENST00000636709 TEFQ10587 303 aa11.05□□□□□ -0.64
CHRNA7-219ENST00000636709 CCDC34Q96HJ3 373 aa11.05□□□□□ -0.64
CHRNA7-219ENST00000636709 CCDC43Q96MW1 224 aaKnown RBP11.05□□□□□ -0.64
CHRNA7-219ENST00000636709 TDRD9Q8NDG6 1382 aaKnown RBP11.04□□□□□ -0.64
CHRNA7-219ENST00000636709 CEP164Q9UPV0 1460 aa11.04□□□□□ -0.64
CHRNA7-219ENST00000636709 MINK1Q8N4C8 1332 aaPredicted RBP11.04□□□□□ -0.64
CHRNA7-219ENST00000636709 HMMRO75330 724 aa11.04□□□□□ -0.64
CHRNA7-219ENST00000636709 H3BQV1 296 aa11.04□□□□□ -0.64
CHRNA7-219ENST00000636709 IFFO2Q5TF58 517 aa11.04□□□□□ -0.64
CHRNA7-219ENST00000636709 ARHGAP35Q9NRY4 1499 aa11.03□□□□□ -0.64
CHRNA7-219ENST00000636709 CCDC180Q9P1Z9 1646 aa11.03□□□□□ -0.64
CHRNA7-219ENST00000636709 DCAF1Q9Y4B6 1507 aa11.03□□□□□ -0.64
CHRNA7-219ENST00000636709 NOP58Q9Y2X3 529 aaKnown RBP11.03□□□□□ -0.64
CHRNA7-219ENST00000636709 PLIN1O60240 522 aa11.03□□□□□ -0.64
CHRNA7-219ENST00000636709 COG3Q96JB2 828 aa11.03□□□□□ -0.64
CHRNA7-219ENST00000636709 FHAD1B1AJZ9 1412 aa11.03□□□□□ -0.64
CHRNA7-219ENST00000636709 FAM69CQ0P6D2 419 aa11.02□□□□□ -0.65
CHRNA7-219ENST00000636709 CCDC27Q2M243 656 aa11.02□□□□□ -0.65
CHRNA7-219ENST00000636709 CFAP44Q96MT7 982 aa11.02□□□□□ -0.65
CHRNA7-219ENST00000636709 RWDD1Q9H446 243 aaPredicted RBP11.02□□□□□ -0.65
CHRNA7-219ENST00000636709 MCTP1Q6DN14 999 aa11.02□□□□□ -0.65
CHRNA7-219ENST00000636709 KDM4AO75164 1064 aa11.02□□□□□ -0.65
CHRNA7-219ENST00000636709 KIF16BQ96L93 1317 aa11.01□□□□□ -0.65
CHRNA7-219ENST00000636709 CHMP4AQ9BY43 222 aa11.01□□□□□ -0.65
CHRNA7-219ENST00000636709 IKQ13123 557 aaPredicted RBP11.01□□□□□ -0.65
CHRNA7-219ENST00000636709 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.01□□□□□ -0.65
CHRNA7-219ENST00000636709 C9orf78Q9NZ63 289 aaPredicted RBP11.01□□□□□ -0.65
CHRNA7-219ENST00000636709 PCMTD1Q96MG8 357 aaPredicted RBP11.01□□□□□ -0.65
CHRNA7-219ENST00000636709 FOSBP53539 338 aa11.01□□□□□ -0.65
CHRNA7-219ENST00000636709 HDAC5Q9UQL6 1122 aa11.01□□□□□ -0.65
CHRNA7-219ENST00000636709 SYNE3Q6ZMZ3 975 aa11.01□□□□□ -0.65
CHRNA7-219ENST00000636709 STRN4Q9NRL3 753 aa11.01□□□□□ -0.65
CHRNA7-219ENST00000636709 PATL2C9JE40 543 aaKnown RBP11□□□□□ -0.65
CHRNA7-219ENST00000636709 IBSPP21815 317 aaPredicted RBP11□□□□□ -0.65
CHRNA7-219ENST00000636709 FAM184AQ8NB25 1140 aa11□□□□□ -0.65
CHRNA7-219ENST00000636709 NEXNQ0ZGT2 675 aa11□□□□□ -0.65
CHRNA7-219ENST00000636709 TMEM132AQ24JP5 1023 aa11□□□□□ -0.65
CHRNA7-219ENST00000636709 SOGA1O94964 1423 aa10.99□□□□□ -0.65
CHRNA7-219ENST00000636709 ZNF428Q96B54 188 aa10.99□□□□□ -0.65
CHRNA7-219ENST00000636709 BCL2L13Q9BXK5 485 aa10.99□□□□□ -0.65
CHRNA7-219ENST00000636709 AIMP1Q12904 312 aaKnown RBP10.99□□□□□ -0.65
CHRNA7-219ENST00000636709 TPM3P06753 285 aa10.99□□□□□ -0.65
CHRNA7-219ENST00000636709 LMOD3Q0VAK6 560 aa10.98□□□□□ -0.65
CHRNA7-219ENST00000636709 TCERG1O14776 1098 aaKnown RBP10.98□□□□□ -0.65
CHRNA7-219ENST00000636709 PDS5BQ9NTI5 1447 aa10.98□□□□□ -0.65
CHRNA7-219ENST00000636709 GBP4Q96PP9 640 aa10.98□□□□□ -0.65
CHRNA7-219ENST00000636709 MPHOSPH9Q99550 1183 aa10.98□□□□□ -0.65
CHRNA7-219ENST00000636709 NFXL1Q6ZNB6 911 aa10.97□□□□□ -0.65
CHRNA7-219ENST00000636709 ANKRD30AQ9BXX3 1397 aa10.97□□□□□ -0.65
CHRNA7-219ENST00000636709 PAF1Q8N7H5 531 aa10.97□□□□□ -0.65
CHRNA7-219ENST00000636709 RCAN3Q9UKA8 241 aa10.97□□□□□ -0.65
CHRNA7-219ENST00000636709 CCAR2Q8N163 923 aaKnown RBP10.96□□□□□ -0.65
CHRNA7-219ENST00000636709 GOLGA6L1Q8N7Z2 621 aa10.96□□□□□ -0.65
CHRNA7-219ENST00000636709 NLRP2Q9NX02 1062 aa10.96□□□□□ -0.65
CHRNA7-219ENST00000636709 TPM2P07951 284 aa10.96□□□□□ -0.65
CHRNA7-219ENST00000636709 TSR1Q2NL82 804 aaKnown RBP10.96□□□□□ -0.66
CHRNA7-219ENST00000636709 OSCARQ8IYS5 282 aa10.96□□□□□ -0.66
CHRNA7-219ENST00000636709 SYAP1Q96A49 352 aaPredicted RBP10.96□□□□□ -0.66
CHRNA7-219ENST00000636709 NACADO15069 1562 aa10.95□□□□□ -0.66
CHRNA7-219ENST00000636709 PRDM2Q13029 1718 aa10.95□□□□□ -0.66
CHRNA7-219ENST00000636709 SMARCA2P51531 1590 aa10.95□□□□□ -0.66
CHRNA7-219ENST00000636709 RBM42Q9BTD8 480 aaKnown RBP10.94□□□□□ -0.66
CHRNA7-219ENST00000636709 TRIM29Q14134 588 aa10.94□□□□□ -0.66
CHRNA7-219ENST00000636709 PAXIP1Q6ZW49 1069 aaPredicted RBP10.94□□□□□ -0.66
CHRNA7-219ENST00000636709 PMFBP1Q8TBY8 1022 aa10.94□□□□□ -0.66
CHRNA7-219ENST00000636709 R3HCC1Q9Y3T6 440 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms