RNA–Protein interactions for RNA: ENST00000636690.1

GABRB3-221, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-221ENST00000636690 CCDC144AA2RUR9 1427 aa9.74□□□□□ -0.85
GABRB3-221ENST00000636690 HNRNPMP52272 730 aaKnown RBP eCLIP9.74□□□□□ -0.85
GABRB3-221ENST00000636690 ABCA9Q8IUA7 1624 aa9.74□□□□□ -0.85
GABRB3-221ENST00000636690 GPRASP1Q5JY77 1395 aa9.74□□□□□ -0.85
GABRB3-221ENST00000636690 KIF7Q2M1P5 1343 aa9.73□□□□□ -0.85
GABRB3-221ENST00000636690 SUPT16HQ9Y5B9 1047 aaKnown RBP9.72□□□□□ -0.85
GABRB3-221ENST00000636690 DEPDC5O75140 1603 aa9.71□□□□□ -0.85
GABRB3-221ENST00000636690 HIRIP3Q9BW71 556 aaPredicted RBP9.71□□□□□ -0.86
GABRB3-221ENST00000636690 PRKRIP1Q9H875 184 aaPredicted RBP9.71□□□□□ -0.86
GABRB3-221ENST00000636690 PRAG1Q86YV5 1406 aa9.71□□□□□ -0.86
GABRB3-221ENST00000636690 ZFYVE16Q7Z3T8 1539 aa9.71□□□□□ -0.86
GABRB3-221ENST00000636690 ERICH6BQ5W0A0 696 aa9.7□□□□□ -0.86
GABRB3-221ENST00000636690 INO80Q9ULG1 1556 aaPredicted RBP9.7□□□□□ -0.86
GABRB3-221ENST00000636690 TRPM1Q7Z4N2 1603 aa9.7□□□□□ -0.86
GABRB3-221ENST00000636690 VWDEQ8N2E2 1590 aa9.69□□□□□ -0.86
GABRB3-221ENST00000636690 KCNH8Q96L42 1107 aa9.69□□□□□ -0.86
GABRB3-221ENST00000636690 CFAP74Q9C0B2 1584 aa9.69□□□□□ -0.86
GABRB3-221ENST00000636690 PRDM15P57071 1507 aaPredicted RBP9.68□□□□□ -0.86
GABRB3-221ENST00000636690 PLA2R1Q13018 1463 aa9.68□□□□□ -0.86
GABRB3-221ENST00000636690 NEFLP07196 543 aa9.68□□□□□ -0.86
GABRB3-221ENST00000636690 TRPM2O94759 1503 aa9.67□□□□□ -0.86
GABRB3-221ENST00000636690 PTPRTO14522 1441 aa9.67□□□□□ -0.86
GABRB3-221ENST00000636690 DHX29Q7Z478 1369 aaKnown RBP9.67□□□□□ -0.86
GABRB3-221ENST00000636690 BCORL1Q5H9F3 1711 aa9.67□□□□□ -0.86
GABRB3-221ENST00000636690 E9PCH4 1651 aa9.67□□□□□ -0.86
GABRB3-221ENST00000636690 TET3O43151 1660 aa9.67□□□□□ -0.86
GABRB3-221ENST00000636690 ATP7AQ04656 1500 aa9.66□□□□□ -0.86
GABRB3-221ENST00000636690 INSRP06213 1382 aa9.66□□□□□ -0.86
GABRB3-221ENST00000636690 WASHC2CQ9Y4E1 1318 aa9.66□□□□□ -0.86
GABRB3-221ENST00000636690 C11orf95C9JLR9 678 aaPredicted RBP9.66□□□□□ -0.86
GABRB3-221ENST00000636690 CARD11Q9BXL7 1154 aa9.66□□□□□ -0.86
GABRB3-221ENST00000636690 RNF17Q9BXT8 1623 aaKnown RBP9.66□□□□□ -0.86
GABRB3-221ENST00000636690 ZMYM4Q5VZL5 1548 aa9.66□□□□□ -0.86
GABRB3-221ENST00000636690 FANCAO15360 1455 aa9.66□□□□□ -0.86
GABRB3-221ENST00000636690 A2MP01023 1474 aa9.66□□□□□ -0.86
GABRB3-221ENST00000636690 TRAPPC8Q9Y2L5 1435 aa9.65□□□□□ -0.86
GABRB3-221ENST00000636690 SPAG9O60271 1321 aaKnown RBP9.65□□□□□ -0.86
GABRB3-221ENST00000636690 ZBED9Q6R2W3 1325 aa9.65□□□□□ -0.86
GABRB3-221ENST00000636690 SLC24A1O60721 1099 aa9.65□□□□□ -0.86
GABRB3-221ENST00000636690 LMTK2Q8IWU2 1503 aa9.65□□□□□ -0.86
GABRB3-221ENST00000636690 KANK1Q14678 1352 aa9.64□□□□□ -0.87
GABRB3-221ENST00000636690 SCAPERQ9BY12 1400 aa9.64□□□□□ -0.87
GABRB3-221ENST00000636690 CEP152O94986 1710 aa9.63□□□□□ -0.87
GABRB3-221ENST00000636690 KIAA1210Q9ULL0 1709 aa9.63□□□□□ -0.87
GABRB3-221ENST00000636690 RALBP1Q15311 655 aa9.63□□□□□ -0.87
GABRB3-221ENST00000636690 DCAF11Q8TEB1 546 aa9.63□□□□□ -0.87
GABRB3-221ENST00000636690 ZNF518AQ6AHZ1 1483 aa9.63□□□□□ -0.87
GABRB3-221ENST00000636690 COL17A1Q9UMD9 1497 aaPredicted RBP9.63□□□□□ -0.87
GABRB3-221ENST00000636690 ASXL2Q76L83 1435 aa9.63□□□□□ -0.87
GABRB3-221ENST00000636690 SPHKAPQ2M3C7 1700 aa9.62□□□□□ -0.87
GABRB3-221ENST00000636690 ADGRL1O94910 1474 aa9.62□□□□□ -0.87
GABRB3-221ENST00000636690 BRD4O60885 1362 aaPredicted RBP9.62□□□□□ -0.87
GABRB3-221ENST00000636690 HNRNPUQ00839 825 aaKnown RBP eCLIP9.61□□□□□ -0.87
GABRB3-221ENST00000636690 MRS2Q9HD23 443 aa9.61□□□□□ -0.87
GABRB3-221ENST00000636690 MYOM2P54296 1465 aa9.6□□□□□ -0.87
GABRB3-221ENST00000636690 MADDQ8WXG6 1647 aa9.6□□□□□ -0.87
GABRB3-221ENST00000636690 MLH3Q9UHC1 1453 aa9.59□□□□□ -0.87
GABRB3-221ENST00000636690 NEO1Q92859 1461 aa9.59□□□□□ -0.87
GABRB3-221ENST00000636690 EFCAB6Q5THR3 1501 aa9.58□□□□□ -0.88
GABRB3-221ENST00000636690 MROH1Q8NDA8 1641 aa9.58□□□□□ -0.88
GABRB3-221ENST00000636690 ST20-MTHFSA0A0A6YYL1 179 aa9.58□□□□□ -0.88
GABRB3-221ENST00000636690 OSCARQ8IYS5 282 aa9.58□□□□□ -0.88
GABRB3-221ENST00000636690 IQGAP1P46940 1657 aa9.58□□□□□ -0.88
GABRB3-221ENST00000636690 MYBBP1AQ9BQG0 1328 aaKnown RBP9.57□□□□□ -0.88
GABRB3-221ENST00000636690 CDCA8Q53HL2 280 aa9.57□□□□□ -0.88
GABRB3-221ENST00000636690 ZNF326Q5BKZ1 582 aaKnown RBP9.57□□□□□ -0.88
GABRB3-221ENST00000636690 LRPPRCP42704 1394 aaKnown RBP9.57□□□□□ -0.88
GABRB3-221ENST00000636690 EIF3AQ14152 1382 aaKnown RBP9.57□□□□□ -0.88
GABRB3-221ENST00000636690 PARD3Q8TEW0 1356 aa9.57□□□□□ -0.88
GABRB3-221ENST00000636690 POGZQ7Z3K3 1410 aa9.56□□□□□ -0.88
GABRB3-221ENST00000636690 SMG6Q86US8 1419 aaKnown RBP9.56□□□□□ -0.88
GABRB3-221ENST00000636690 KIDINS220Q9ULH0 1771 aa9.56□□□□□ -0.88
GABRB3-221ENST00000636690 SCAF11Q99590 1463 aaKnown RBP9.56□□□□□ -0.88
GABRB3-221ENST00000636690 NPM1P06748 294 aaKnown RBP eCLIP9.56□□□□□ -0.88
GABRB3-221ENST00000636690 FKBP8Q14318 412 aa9.56□□□□□ -0.88
GABRB3-221ENST00000636690 CLTCL1P53675 1640 aa9.56□□□□□ -0.88
GABRB3-221ENST00000636690 TMF1P82094 1093 aa9.55□□□□□ -0.88
GABRB3-221ENST00000636690 MYT1Q01538 1121 aa9.55□□□□□ -0.88
GABRB3-221ENST00000636690 TESK2Q96S53 571 aa9.55□□□□□ -0.88
GABRB3-221ENST00000636690 HECW2Q9P2P5 1572 aa9.54□□□□□ -0.88
GABRB3-221ENST00000636690 NRXN1Q9ULB1 1477 aa9.54□□□□□ -0.88
GABRB3-221ENST00000636690 NPC1L1Q9UHC9 1359 aa9.54□□□□□ -0.88
GABRB3-221ENST00000636690 SBNO2Q9Y2G9 1366 aa9.54□□□□□ -0.88
GABRB3-221ENST00000636690 NLRP13Q86W25 1043 aa9.54□□□□□ -0.88
GABRB3-221ENST00000636690 AFAP1Q8N556 730 aa9.54□□□□□ -0.88
GABRB3-221ENST00000636690 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.54□□□□□ -0.88
GABRB3-221ENST00000636690 KDM2AQ9Y2K7 1162 aa9.54□□□□□ -0.88
GABRB3-221ENST00000636690 SYNMO15061 1565 aa9.54□□□□□ -0.88
GABRB3-221ENST00000636690 PNISRQ8TF01 805 aaKnown RBP9.53□□□□□ -0.88
GABRB3-221ENST00000636690 CD109Q6YHK3 1445 aa9.53□□□□□ -0.88
GABRB3-221ENST00000636690 SETBP1Q9Y6X0 1596 aa9.53□□□□□ -0.88
GABRB3-221ENST00000636690 MAP3K4Q9Y6R4 1608 aa9.53□□□□□ -0.88
GABRB3-221ENST00000636690 KIF1BO60333 1816 aa9.52□□□□□ -0.89
GABRB3-221ENST00000636690 IFT172Q9UG01 1749 aa9.52□□□□□ -0.89
GABRB3-221ENST00000636690 MYO3AQ8NEV4 1616 aa9.52□□□□□ -0.89
GABRB3-221ENST00000636690 RNF123Q5XPI4 1314 aa9.52□□□□□ -0.89
GABRB3-221ENST00000636690 ADGRB3O60242 1522 aa9.51□□□□□ -0.89
GABRB3-221ENST00000636690 GLI2P10070 1586 aa9.51□□□□□ -0.89
GABRB3-221ENST00000636690 PER1O15534 1290 aaPredicted RBP9.51□□□□□ -0.89
GABRB3-221ENST00000636690 PDE3BQ13370 1112 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms