RNA–Protein interactions for RNA: ENST00000636662.2

SCN2A-212, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 9,456 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-212ENST00000636662 IRX3P78415 501 aaPredicted RBP6.89□□□□□ -1.31
SCN2A-212ENST00000636662 SETD5Q9C0A6 1442 aa6.88□□□□□ -1.31
SCN2A-212ENST00000636662 TERF1P54274 439 aa6.88□□□□□ -1.31
SCN2A-212ENST00000636662 NF2P35240 595 aa6.88□□□□□ -1.31
SCN2A-212ENST00000636662 SLKQ9H2G2 1235 aaPredicted RBP6.88□□□□□ -1.31
SCN2A-212ENST00000636662 CHMP5Q9NZZ3 219 aa6.88□□□□□ -1.31
SCN2A-212ENST00000636662 FHAD1B1AJZ9 1412 aa6.88□□□□□ -1.31
SCN2A-212ENST00000636662 KIF20AO95235 890 aa6.88□□□□□ -1.31
SCN2A-212ENST00000636662 TSR1Q2NL82 804 aaKnown RBP6.88□□□□□ -1.31
SCN2A-212ENST00000636662 SMAP1Q8IYB5 467 aaPredicted RBP6.88□□□□□ -1.31
SCN2A-212ENST00000636662 RCAN3Q9UKA8 241 aa6.88□□□□□ -1.31
SCN2A-212ENST00000636662 ACBD3Q9H3P7 528 aa6.88□□□□□ -1.31
SCN2A-212ENST00000636662 PLEKHG5O94827 1062 aa6.87□□□□□ -1.31
SCN2A-212ENST00000636662 OS9Q13438 667 aaPredicted RBP6.87□□□□□ -1.31
SCN2A-212ENST00000636662 CC2D1BQ5T0F9 858 aaKnown RBP6.87□□□□□ -1.31
SCN2A-212ENST00000636662 TICAM2Q86XR7 235 aa6.87□□□□□ -1.31
SCN2A-212ENST00000636662 INCENPQ9NQS7 918 aa6.87□□□□□ -1.31
SCN2A-212ENST00000636662 CDR1P51861 262 aa6.87□□□□□ -1.31
SCN2A-212ENST00000636662 GOLGA2Q08379 1002 aa6.87□□□□□ -1.31
SCN2A-212ENST00000636662 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.87□□□□□ -1.31
SCN2A-212ENST00000636662 DYNC1I1O14576 645 aa6.87□□□□□ -1.31
SCN2A-212ENST00000636662 ZRSR2Q15696 482 aaKnown RBP6.87□□□□□ -1.31
SCN2A-212ENST00000636662 RNF20Q5VTR2 975 aa6.87□□□□□ -1.31
SCN2A-212ENST00000636662 CENPHQ9H3R5 247 aa6.86□□□□□ -1.31
SCN2A-212ENST00000636662 BBXQ8WY36 941 aaPredicted RBP6.86□□□□□ -1.31
SCN2A-212ENST00000636662 FRAT1Q92837 279 aaPredicted RBP6.86□□□□□ -1.31
SCN2A-212ENST00000636662 LMOD2Q6P5Q4 547 aa6.86□□□□□ -1.31
SCN2A-212ENST00000636662 LEKR1Q6ZMV7 388 aa6.86□□□□□ -1.31
SCN2A-212ENST00000636662 FAM107BQ9H098 131 aa6.86□□□□□ -1.31
SCN2A-212ENST00000636662 CLCN1P35523 988 aa6.85□□□□□ -1.31
SCN2A-212ENST00000636662 SSR1P43307 286 aaKnown RBP6.85□□□□□ -1.31
SCN2A-212ENST00000636662 E9PSI1 815 aa6.85□□□□□ -1.31
SCN2A-212ENST00000636662 CHMP4AQ9BY43 222 aa6.85□□□□□ -1.31
SCN2A-212ENST00000636662 RWDD1Q9H446 243 aaPredicted RBP6.85□□□□□ -1.31
SCN2A-212ENST00000636662 ATP6V1DQ9Y5K8 247 aa6.85□□□□□ -1.31
SCN2A-212ENST00000636662 TPD52L1Q16890 204 aaPredicted RBP6.85□□□□□ -1.31
SCN2A-212ENST00000636662 HSP90B2PQ58FF3 399 aa6.85□□□□□ -1.31
SCN2A-212ENST00000636662 RBM10P98175 930 aaKnown RBP6.85□□□□□ -1.31
SCN2A-212ENST00000636662 IPO4Q8TEX9 1081 aaKnown RBP6.85□□□□□ -1.31
SCN2A-212ENST00000636662 CENPJQ9HC77 1338 aaPredicted RBP6.85□□□□□ -1.31
SCN2A-212ENST00000636662 ESPNB1AK53 854 aa6.85□□□□□ -1.31
SCN2A-212ENST00000636662 BRPF3Q9ULD4 1205 aa6.85□□□□□ -1.31
SCN2A-212ENST00000636662 RBM28Q9NW13 759 aaKnown RBP6.84□□□□□ -1.31
SCN2A-212ENST00000636662 VGFO15240 615 aaPredicted RBP6.84□□□□□ -1.31
SCN2A-212ENST00000636662 HOMER1Q86YM7 354 aa6.84□□□□□ -1.31
SCN2A-212ENST00000636662 NINLQ9Y2I6 1382 aa6.83□□□□□ -1.32
SCN2A-212ENST00000636662 NPHP1O15259 732 aa6.83□□□□□ -1.32
SCN2A-212ENST00000636662 MNS1Q8NEH6 495 aa6.83□□□□□ -1.32
SCN2A-212ENST00000636662 GOLGA6L19H0YKK7 550 aa6.83□□□□□ -1.32
SCN2A-212ENST00000636662 IBSPP21815 317 aaPredicted RBP6.83□□□□□ -1.32
SCN2A-212ENST00000636662 CHGAP10645 457 aaKnown RBP6.83□□□□□ -1.32
SCN2A-212ENST00000636662 NUCB2P80303 420 aa6.83□□□□□ -1.32
SCN2A-212ENST00000636662 RASSF8Q8NHQ8 419 aa6.83□□□□□ -1.32
SCN2A-212ENST00000636662 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.83□□□□□ -1.32
SCN2A-212ENST00000636662 ANKRD30AQ9BXX3 1397 aa6.83□□□□□ -1.32
SCN2A-212ENST00000636662 NASPP49321 788 aaPredicted RBP6.83□□□□□ -1.32
SCN2A-212ENST00000636662 CHMP4CQ96CF2 233 aa6.83□□□□□ -1.32
SCN2A-212ENST00000636662 CCP110O43303 1012 aa6.83□□□□□ -1.32
SCN2A-212ENST00000636662 HS1BP3Q53T59 392 aa6.83□□□□□ -1.32
SCN2A-212ENST00000636662 FAM193AP78312 1265 aa6.82□□□□□ -1.32
SCN2A-212ENST00000636662 ZSCAN30Q86W11 494 aa6.82□□□□□ -1.32
SCN2A-212ENST00000636662 PAF1Q8N7H5 531 aa6.82□□□□□ -1.32
SCN2A-212ENST00000636662 CIZ1Q9ULV3 898 aaPredicted RBP6.82□□□□□ -1.32
SCN2A-212ENST00000636662 KIAA0754O94854 1291 aa6.82□□□□□ -1.32
SCN2A-212ENST00000636662 KIAA1211Q6ZU35 1233 aa6.82□□□□□ -1.32
SCN2A-212ENST00000636662 PLPPR3Q6T4P5 718 aa6.82□□□□□ -1.32
SCN2A-212ENST00000636662 CCDC34Q96HJ3 373 aa6.81□□□□□ -1.32
SCN2A-212ENST00000636662 CGNL1Q0VF96 1302 aa6.81□□□□□ -1.32
SCN2A-212ENST00000636662 TPM1P09493 284 aa6.81□□□□□ -1.32
SCN2A-212ENST00000636662 FOXD4L1Q9NU39 408 aa6.81□□□□□ -1.32
SCN2A-212ENST00000636662 WASHC2CQ9Y4E1 1318 aa6.81□□□□□ -1.32
SCN2A-212ENST00000636662 ST18O60284 1047 aa6.81□□□□□ -1.32
SCN2A-212ENST00000636662 MBD3O95983 291 aa6.81□□□□□ -1.32
SCN2A-212ENST00000636662 ERCC4Q92889 916 aaPredicted RBP6.81□□□□□ -1.32
SCN2A-212ENST00000636662 R3HCC1Q9Y3T6 440 aaKnown RBP6.81□□□□□ -1.32
SCN2A-212ENST00000636662 WASHC2AQ641Q2 1341 aa6.81□□□□□ -1.32
SCN2A-212ENST00000636662 FOXD4L5Q5VV16 416 aaPredicted RBP6.81□□□□□ -1.32
SCN2A-212ENST00000636662 FOXD4L4Q8WXT5 416 aaPredicted RBP6.81□□□□□ -1.32
SCN2A-212ENST00000636662 PRIMPOLQ96LW4 560 aa6.8□□□□□ -1.32
SCN2A-212ENST00000636662 TMX4Q9H1E5 349 aaPredicted RBP6.8□□□□□ -1.32
SCN2A-212ENST00000636662 CCDC9Q9Y3X0 531 aaKnown RBP6.8□□□□□ -1.32
SCN2A-212ENST00000636662 CFAP53Q96M91 514 aa6.8□□□□□ -1.32
SCN2A-212ENST00000636662 TIGD1Q96MW7 591 aa6.8□□□□□ -1.32
SCN2A-212ENST00000636662 ANKRD62A6NC57 917 aa6.8□□□□□ -1.32
SCN2A-212ENST00000636662 ERICH4A6NGS2 130 aa6.8□□□□□ -1.32
SCN2A-212ENST00000636662 STAG3Q9UJ98 1225 aa6.8□□□□□ -1.32
SCN2A-212ENST00000636662 GOLGA6L7A0A1B0GV03 622 aa6.8□□□□□ -1.32
SCN2A-212ENST00000636662 FAM184AQ8NB25 1140 aa6.8□□□□□ -1.32
SCN2A-212ENST00000636662 PCMTD1Q96MG8 357 aaPredicted RBP6.8□□□□□ -1.32
SCN2A-212ENST00000636662 SUDS3Q9H7L9 328 aaPredicted RBP6.8□□□□□ -1.32
SCN2A-212ENST00000636662 KIF2AO00139 706 aaPredicted RBP6.79□□□□□ -1.32
SCN2A-212ENST00000636662 CCDC175P0C221 793 aa6.79□□□□□ -1.32
SCN2A-212ENST00000636662 RRP1P56182 461 aaKnown RBP6.79□□□□□ -1.32
SCN2A-212ENST00000636662 SASS6Q6UVJ0 657 aa6.79□□□□□ -1.32
SCN2A-212ENST00000636662 PAXIP1Q6ZW49 1069 aaPredicted RBP6.79□□□□□ -1.32
SCN2A-212ENST00000636662 SMG6Q86US8 1419 aaKnown RBP6.79□□□□□ -1.32
SCN2A-212ENST00000636662 PLEKHH2Q8IVE3 1493 aa6.79□□□□□ -1.32
SCN2A-212ENST00000636662 IPO8O15397 1037 aaKnown RBP6.79□□□□□ -1.32
SCN2A-212ENST00000636662 KIF15Q9NS87 1388 aa6.79□□□□□ -1.32
SCN2A-212ENST00000636662 DDX49Q9Y6V7 483 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms