RNA–Protein interactions for RNA: ENST00000636616.1

EFHC1-223, Transcript of EF-hand domain containing 1, humanhuman

TSL 5

Gene EFHC1, Length 1,636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-223ENST00000636616 RBM26Q5T8P6 1007 aaKnown RBP8.93□□□□□ -0.98
EFHC1-223ENST00000636616 HOXB1P14653 301 aaPredicted RBP8.91□□□□□ -0.98
EFHC1-223ENST00000636616 PHF14O94880 888 aa8.91□□□□□ -0.98
EFHC1-223ENST00000636616 EPAS1Q99814 870 aa8.89□□□□□ -0.99
EFHC1-223ENST00000636616 PCDHGA10Q9Y5H3 936 aa8.89□□□□□ -0.99
EFHC1-223ENST00000636616 PRIM1P49642 420 aaKnown RBP8.88□□□□□ -0.99
EFHC1-223ENST00000636616 JPH4Q96JJ6 628 aa8.88□□□□□ -0.99
EFHC1-223ENST00000636616 LHX6Q9UPM6 363 aa8.88□□□□□ -0.99
EFHC1-223ENST00000636616 FOSBP53539 338 aa8.87□□□□□ -0.99
EFHC1-223ENST00000636616 ZC3H15Q8WU90 426 aaKnown RBP8.87□□□□□ -0.99
EFHC1-223ENST00000636616 BRPF1P55201 1214 aaPredicted RBP8.87□□□□□ -0.99
EFHC1-223ENST00000636616 TYW1BQ6NUM6 668 aa8.87□□□□□ -0.99
EFHC1-223ENST00000636616 GPIHBP1Q8IV16 184 aa8.87□□□□□ -0.99
EFHC1-223ENST00000636616 ZNF454Q8N9F8 522 aa8.86□□□□□ -0.99
EFHC1-223ENST00000636616 EN1Q05925 392 aaPredicted RBP8.85□□□□□ -0.99
EFHC1-223ENST00000636616 NUTM2FA1L443 756 aa8.84□□□□□ -0.99
EFHC1-223ENST00000636616 FBXW7Q969H0 707 aa8.84□□□□□ -0.99
EFHC1-223ENST00000636616 ZDHHC16Q969W1 377 aa8.83□□□□□ -1
EFHC1-223ENST00000636616 RBM33Q96EV2 1170 aaKnown RBP8.83□□□□□ -1
EFHC1-223ENST00000636616 PSDA5PKW4 1024 aaPredicted RBP8.83□□□□□ -1
EFHC1-223ENST00000636616 MAP3K7O43318 606 aa8.82□□□□□ -1
EFHC1-223ENST00000636616 IRX2Q9BZI1 471 aaPredicted RBP8.82□□□□□ -1
EFHC1-223ENST00000636616 ERBB3P21860 1342 aa8.82□□□□□ -1
EFHC1-223ENST00000636616 GPR37O15354 613 aa8.81□□□□□ -1
EFHC1-223ENST00000636616 ZMYND10O75800 440 aa8.81□□□□□ -1
EFHC1-223ENST00000636616 UBTFP17480 764 aaKnown RBP8.81□□□□□ -1
EFHC1-223ENST00000636616 PPP4R3BQ5MIZ7 849 aa8.8□□□□□ -1
EFHC1-223ENST00000636616 ADAM33Q9BZ11 813 aa8.8□□□□□ -1
EFHC1-223ENST00000636616 TSR1Q2NL82 804 aaKnown RBP8.8□□□□□ -1
EFHC1-223ENST00000636616 FCHSD2O94868 740 aa8.79□□□□□ -1
EFHC1-223ENST00000636616 C6orf132Q5T0Z8 1188 aa8.79□□□□□ -1
EFHC1-223ENST00000636616 BARGINQ6ZT62 677 aa8.79□□□□□ -1
EFHC1-223ENST00000636616 CDHR5Q9HBB8 845 aa8.79□□□□□ -1
EFHC1-223ENST00000636616 TRIM26Q12899 539 aaPredicted RBP8.78□□□□□ -1
EFHC1-223ENST00000636616 PTGDRQ13258 359 aa8.78□□□□□ -1
EFHC1-223ENST00000636616 NPDC1Q9NQX5 325 aaPredicted RBP8.77□□□□□ -1.01
EFHC1-223ENST00000636616 BCL2L12Q9HB09 334 aa8.76□□□□□ -1.01
EFHC1-223ENST00000636616 HIC1Q14526 733 aa8.76□□□□□ -1.01
EFHC1-223ENST00000636616 GNPATO15228 680 aa8.75□□□□□ -1.01
EFHC1-223ENST00000636616 RGS20O76081 388 aa8.75□□□□□ -1.01
EFHC1-223ENST00000636616 VARS2Q5ST30 1063 aaKnown RBP8.75□□□□□ -1.01
EFHC1-223ENST00000636616 SLC24A3Q9HC58 644 aa8.74□□□□□ -1.01
EFHC1-223ENST00000636616 KRI1Q8N9T8 703 aaKnown RBP8.73□□□□□ -1.01
EFHC1-223ENST00000636616 PTPREP23469 700 aa8.72□□□□□ -1.01
EFHC1-223ENST00000636616 CERKQ8TCT0 537 aa8.72□□□□□ -1.01
EFHC1-223ENST00000636616 FECHP22830 423 aa8.72□□□□□ -1.01
EFHC1-223ENST00000636616 NPM2Q86SE8 214 aaKnown RBP8.72□□□□□ -1.01
EFHC1-223ENST00000636616 COL9A1P20849 921 aa8.71□□□□□ -1.02
EFHC1-223ENST00000636616 HRCP23327 699 aa8.7□□□□□ -1.02
EFHC1-223ENST00000636616 NEUROD2Q15784 382 aa8.7□□□□□ -1.02
EFHC1-223ENST00000636616 HCSTQ9UBK5 93 aa8.7□□□□□ -1.02
EFHC1-223ENST00000636616 MINK1Q8N4C8 1332 aaPredicted RBP8.7□□□□□ -1.02
EFHC1-223ENST00000636616 PPP1R3GB7ZBB8 358 aa8.69□□□□□ -1.02
EFHC1-223ENST00000636616 MAP2K5Q13163 448 aa8.69□□□□□ -1.02
EFHC1-223ENST00000636616 ZNF687Q8N1G0 1237 aa8.69□□□□□ -1.02
EFHC1-223ENST00000636616 AK7Q96M32 723 aa8.69□□□□□ -1.02
EFHC1-223ENST00000636616 KCNK17Q96T54 332 aa8.69□□□□□ -1.02
EFHC1-223ENST00000636616 IRF6O14896 467 aa8.68□□□□□ -1.02
EFHC1-223ENST00000636616 PRSS12P56730 875 aa8.68□□□□□ -1.02
EFHC1-223ENST00000636616 POTEEQ6S8J3 1075 aa8.68□□□□□ -1.02
EFHC1-223ENST00000636616 ARHGAP33O14559 1287 aa8.67□□□□□ -1.02
EFHC1-223ENST00000636616 PADI6Q6TGC4 694 aa8.67□□□□□ -1.02
EFHC1-223ENST00000636616 CDCA7LQ96GN5 454 aa8.67□□□□□ -1.02
EFHC1-223ENST00000636616 RBM27Q9P2N5 1060 aaKnown RBP8.67□□□□□ -1.02
EFHC1-223ENST00000636616 PSEN2P49810 448 aa8.66□□□□□ -1.02
EFHC1-223ENST00000636616 TTC13Q8NBP0 860 aa8.66□□□□□ -1.02
EFHC1-223ENST00000636616 KCNH8Q96L42 1107 aa8.66□□□□□ -1.02
EFHC1-223ENST00000636616 CCDC102AQ96A19 550 aa8.65□□□□□ -1.02
EFHC1-223ENST00000636616 AXIN2Q9Y2T1 843 aa8.65□□□□□ -1.02
EFHC1-223ENST00000636616 PBX2P40425 430 aa8.65□□□□□ -1.03
EFHC1-223ENST00000636616 TRIM66O15016 1216 aa8.63□□□□□ -1.03
EFHC1-223ENST00000636616 ZBED2Q9BTP6 218 aa8.63□□□□□ -1.03
EFHC1-223ENST00000636616 FAM198AQ9UFP1 575 aa8.63□□□□□ -1.03
EFHC1-223ENST00000636616 DMRTA1Q5VZB9 504 aa8.62□□□□□ -1.03
EFHC1-223ENST00000636616 TSKSQ9UJT2 592 aa8.62□□□□□ -1.03
EFHC1-223ENST00000636616 TRIM6-TRIM34B2RNG4 842 aa8.62□□□□□ -1.03
EFHC1-223ENST00000636616 FAM161AQ3B820 660 aa8.62□□□□□ -1.03
EFHC1-223ENST00000636616 PROX2Q3B8N5 592 aa8.62□□□□□ -1.03
EFHC1-223ENST00000636616 ADGRG1Q9Y653 693 aa8.62□□□□□ -1.03
EFHC1-223ENST00000636616 ONECUT3O60422 494 aaPredicted RBP8.61□□□□□ -1.03
EFHC1-223ENST00000636616 ANKRD13DQ6ZTN6 518 aa8.6□□□□□ -1.03
EFHC1-223ENST00000636616 SLC4A5Q9BY07 1137 aa8.6□□□□□ -1.03
EFHC1-223ENST00000636616 OATP04181 439 aa8.59□□□□□ -1.03
EFHC1-223ENST00000636616 ZMYND15Q9H091 742 aa8.59□□□□□ -1.03
EFHC1-223ENST00000636616 PDE4DQ08499 809 aa8.58□□□□□ -1.04
EFHC1-223ENST00000636616 PACS2Q86VP3 889 aa8.58□□□□□ -1.04
EFHC1-223ENST00000636616 PXYLP1Q8TE99 480 aa8.58□□□□□ -1.04
EFHC1-223ENST00000636616 CCDC180Q9P1Z9 1646 aa8.57□□□□□ -1.04
EFHC1-223ENST00000636616 C3orf80F5H4A9 247 aa8.57□□□□□ -1.04
EFHC1-223ENST00000636616 AMHR2Q16671 573 aa8.57□□□□□ -1.04
EFHC1-223ENST00000636616 NUDT18Q6ZVK8 323 aa8.57□□□□□ -1.04
EFHC1-223ENST00000636616 METTL3Q86U44 580 aaKnown RBP8.57□□□□□ -1.04
EFHC1-223ENST00000636616 TATDN2Q93075 761 aa8.57□□□□□ -1.04
EFHC1-223ENST00000636616 PHOX2BQ99453 314 aa8.57□□□□□ -1.04
EFHC1-223ENST00000636616 RSPH6AQ9H0K4 717 aa8.57□□□□□ -1.04
EFHC1-223ENST00000636616 KIAA1468Q9P260 1216 aa8.57□□□□□ -1.04
EFHC1-223ENST00000636616 NBPF26B4DH59 902 aa8.56□□□□□ -1.04
EFHC1-223ENST00000636616 RBM46Q8TBY0 533 aaKnown RBP8.56□□□□□ -1.04
EFHC1-223ENST00000636616 EYA1Q99502 592 aa8.56□□□□□ -1.04
EFHC1-223ENST00000636616 RABGEF1Q9UJ41 708 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms