RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 ADGRL2O95490 1459 aa18.76■□□□□ 0.59
CACNA1A-228ENST00000636610 CCDC144AA2RUR9 1427 aa18.75■□□□□ 0.59
CACNA1A-228ENST00000636610 ITSN2Q9NZM3 1697 aa18.75■□□□□ 0.59
CACNA1A-228ENST00000636610 RRP1P56182 461 aaKnown RBP18.74■□□□□ 0.59
CACNA1A-228ENST00000636610 RALBP1Q15311 655 aa18.74■□□□□ 0.59
CACNA1A-228ENST00000636610 RALGAPBQ86X10 1494 aa18.74■□□□□ 0.59
CACNA1A-228ENST00000636610 ANP32AP39687 249 aaKnown RBP18.73■□□□□ 0.59
CACNA1A-228ENST00000636610 NLRP13Q86W25 1043 aa18.73■□□□□ 0.59
CACNA1A-228ENST00000636610 MYT1LQ9UL68 1186 aa18.72■□□□□ 0.59
CACNA1A-228ENST00000636610 KTN1Q86UP2 1357 aaKnown RBP18.72■□□□□ 0.59
CACNA1A-228ENST00000636610 ADGBQ8N7X0 1667 aa18.72■□□□□ 0.59
CACNA1A-228ENST00000636610 ABCC10Q5T3U5 1492 aa18.72■□□□□ 0.59
CACNA1A-228ENST00000636610 ARID4BQ4LE39 1312 aaPredicted RBP18.71■□□□□ 0.59
CACNA1A-228ENST00000636610 DISP3Q9P2K9 1392 aa18.71■□□□□ 0.59
CACNA1A-228ENST00000636610 CDC42BPAQ5VT25 1732 aa18.7■□□□□ 0.58
CACNA1A-228ENST00000636610 UHRF1BP1Q6BDS2 1440 aa18.69■□□□□ 0.58
CACNA1A-228ENST00000636610 RNF123Q5XPI4 1314 aa18.69■□□□□ 0.58
CACNA1A-228ENST00000636610 BRD4O60885 1362 aaPredicted RBP18.69■□□□□ 0.58
CACNA1A-228ENST00000636610 DEKP35659 375 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-228ENST00000636610 NUP160Q12769 1436 aa18.68■□□□□ 0.58
CACNA1A-228ENST00000636610 PER1O15534 1290 aaPredicted RBP18.68■□□□□ 0.58
CACNA1A-228ENST00000636610 ZBTB47Q9UFB7 747 aaPredicted RBP18.67■□□□□ 0.58
CACNA1A-228ENST00000636610 POLR1AO95602 1720 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-228ENST00000636610 CROCC2H7BZ55 1655 aa18.66■□□□□ 0.58
CACNA1A-228ENST00000636610 TESK2Q96S53 571 aa18.66■□□□□ 0.58
CACNA1A-228ENST00000636610 LRPPRCP42704 1394 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-228ENST00000636610 FAM135AQ9P2D6 1515 aa18.65■□□□□ 0.58
CACNA1A-228ENST00000636610 PLEKHH2Q8IVE3 1493 aa18.65■□□□□ 0.58
CACNA1A-228ENST00000636610 LAS1LQ9Y4W2 734 aaKnown RBP18.65■□□□□ 0.58
CACNA1A-228ENST00000636610 C20orf194Q5TEA3 1177 aa18.64■□□□□ 0.57
CACNA1A-228ENST00000636610 SENP3Q9H4L4 574 aaPredicted RBP18.64■□□□□ 0.57
CACNA1A-228ENST00000636610 ADAMTS8Q9UP79 889 aa18.64■□□□□ 0.57
CACNA1A-228ENST00000636610 IPO9Q96P70 1041 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-228ENST00000636610 PRAG1Q86YV5 1406 aa18.63■□□□□ 0.57
CACNA1A-228ENST00000636610 ABCA8O94911 1581 aa18.63■□□□□ 0.57
CACNA1A-228ENST00000636610 CRBNQ96SW2 442 aa18.63■□□□□ 0.57
CACNA1A-228ENST00000636610 CCDC141Q6ZP82 1450 aa18.62■□□□□ 0.57
CACNA1A-228ENST00000636610 ARHGAP5Q13017 1502 aa18.62■□□□□ 0.57
CACNA1A-228ENST00000636610 SYCP2Q9BX26 1530 aa18.62■□□□□ 0.57
CACNA1A-228ENST00000636610 TMF1P82094 1093 aa18.62■□□□□ 0.57
CACNA1A-228ENST00000636610 AFAP1Q8N556 730 aa18.62■□□□□ 0.57
CACNA1A-228ENST00000636610 PLA2R1Q13018 1463 aa18.61■□□□□ 0.57
CACNA1A-228ENST00000636610 CCDC146Q8IYE0 955 aa18.61■□□□□ 0.57
CACNA1A-228ENST00000636610 ADCY10Q96PN6 1610 aa18.6■□□□□ 0.57
CACNA1A-228ENST00000636610 PARD3Q8TEW0 1356 aa18.59■□□□□ 0.57
CACNA1A-228ENST00000636610 SAMD9LQ8IVG5 1584 aa18.59■□□□□ 0.57
CACNA1A-228ENST00000636610 A2MP01023 1474 aa18.58■□□□□ 0.57
CACNA1A-228ENST00000636610 PDE4AP27815 886 aa18.58■□□□□ 0.57
CACNA1A-228ENST00000636610 KNSTRNQ9Y448 316 aa18.58■□□□□ 0.57
CACNA1A-228ENST00000636610 ARHGEF12Q9NZN5 1544 aa18.58■□□□□ 0.56
CACNA1A-228ENST00000636610 SHANK2Q9UPX8 1470 aa18.58■□□□□ 0.56
CACNA1A-228ENST00000636610 WDR43Q15061 677 aaKnown RBP eCLIP18.55■□□□□ 0.56
CACNA1A-228ENST00000636610 KDM5DQ9BY66 1539 aa18.55■□□□□ 0.56
CACNA1A-228ENST00000636610 ERBINQ96RT1 1412 aa18.55■□□□□ 0.56
CACNA1A-228ENST00000636610 SLC4A3P48751 1232 aa18.54■□□□□ 0.56
CACNA1A-228ENST00000636610 RTL5Q5HYW3 569 aaPredicted RBP18.54■□□□□ 0.56
CACNA1A-228ENST00000636610 RSPH4AQ5TD94 716 aa18.54■□□□□ 0.56
CACNA1A-228ENST00000636610 TNNT2P45379 298 aaPredicted RBP18.52■□□□□ 0.56
CACNA1A-228ENST00000636610 CDC42BPBQ9Y5S2 1711 aa18.51■□□□□ 0.55
CACNA1A-228ENST00000636610 TTC37Q6PGP7 1564 aa18.5■□□□□ 0.55
CACNA1A-228ENST00000636610 CHGAP10645 457 aaKnown RBP18.5■□□□□ 0.55
CACNA1A-228ENST00000636610 PPP2R1AP30153 589 aa18.5■□□□□ 0.55
CACNA1A-228ENST00000636610 ERCC6L2Q5T890 1561 aa18.5■□□□□ 0.55
CACNA1A-228ENST00000636610 PDE3BQ13370 1112 aa18.49■□□□□ 0.55
CACNA1A-228ENST00000636610 EFCAB2Q5VUJ9 269 aa18.49■□□□□ 0.55
CACNA1A-228ENST00000636610 RGS3P49796 1198 aa18.48■□□□□ 0.55
CACNA1A-228ENST00000636610 NEUROD2Q15784 382 aa18.48■□□□□ 0.55
CACNA1A-228ENST00000636610 TCERG1O14776 1098 aaKnown RBP18.48■□□□□ 0.55
CACNA1A-228ENST00000636610 BACH2Q9BYV9 841 aa18.47■□□□□ 0.55
CACNA1A-228ENST00000636610 KIF3BO15066 747 aa18.47■□□□□ 0.55
CACNA1A-228ENST00000636610 COL17A1Q9UMD9 1497 aaPredicted RBP18.46■□□□□ 0.55
CACNA1A-228ENST00000636610 SPAG9O60271 1321 aaKnown RBP18.46■□□□□ 0.55
CACNA1A-228ENST00000636610 TRPM1Q7Z4N2 1603 aa18.46■□□□□ 0.55
CACNA1A-228ENST00000636610 PLEKHH1Q9ULM0 1364 aa18.46■□□□□ 0.55
CACNA1A-228ENST00000636610 CFAP70Q5T0N1 1121 aa18.46■□□□□ 0.55
CACNA1A-228ENST00000636610 TRAPPC8Q9Y2L5 1435 aa18.46■□□□□ 0.55
CACNA1A-228ENST00000636610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.45■□□□□ 0.54
CACNA1A-228ENST00000636610 APAF1O14727 1248 aa18.45■□□□□ 0.54
CACNA1A-228ENST00000636610 SPINK5Q9NQ38 1064 aaPredicted RBP18.45■□□□□ 0.54
CACNA1A-228ENST00000636610 ARHGEF5Q12774 1597 aa18.45■□□□□ 0.54
CACNA1A-228ENST00000636610 NEFMP07197 916 aa18.44■□□□□ 0.54
CACNA1A-228ENST00000636610 MAGI2Q86UL8 1455 aa18.43■□□□□ 0.54
CACNA1A-228ENST00000636610 GPRASP1Q5JY77 1395 aa18.42■□□□□ 0.54
CACNA1A-228ENST00000636610 AMER1Q5JTC6 1135 aaPredicted RBP18.42■□□□□ 0.54
CACNA1A-228ENST00000636610 BCAR3O75815 825 aa18.41■□□□□ 0.54
CACNA1A-228ENST00000636610 NUTM2DQ5VT03 806 aaPredicted RBP18.41■□□□□ 0.54
CACNA1A-228ENST00000636610 DUSP27Q5VZP5 1158 aa18.41■□□□□ 0.54
CACNA1A-228ENST00000636610 PREX2Q70Z35 1606 aa18.41■□□□□ 0.54
CACNA1A-228ENST00000636610 GOLGA2Q08379 1002 aa18.41■□□□□ 0.54
CACNA1A-228ENST00000636610 DMRT2Q9Y5R5 561 aa18.4■□□□□ 0.54
CACNA1A-228ENST00000636610 RRP7AQ9Y3A4 280 aaKnown RBP18.39■□□□□ 0.54
CACNA1A-228ENST00000636610 E9PCH4 1651 aa18.39■□□□□ 0.53
CACNA1A-228ENST00000636610 RTN4Q9NQC3 1192 aaKnown RBP18.38■□□□□ 0.53
CACNA1A-228ENST00000636610 WASHC2CQ9Y4E1 1318 aa18.36■□□□□ 0.53
CACNA1A-228ENST00000636610 ADGRF5Q8IZF2 1346 aa18.36■□□□□ 0.53
CACNA1A-228ENST00000636610 PRDM15P57071 1507 aaPredicted RBP18.35■□□□□ 0.53
CACNA1A-228ENST00000636610 TRAK1Q9UPV9 953 aa18.35■□□□□ 0.53
CACNA1A-228ENST00000636610 BLMP54132 1417 aaPredicted RBP18.35■□□□□ 0.53
CACNA1A-228ENST00000636610 WDR7Q9Y4E6 1490 aa18.34■□□□□ 0.53
CACNA1A-228ENST00000636610 FRAT1Q92837 279 aaPredicted RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms