RNA–Protein interactions for RNA: ENST00000636512.1

GABRB3-220, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 99 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-220ENST00000636512 PLPP6Q8IY26 295 aa2.79□□□□□ -1.96
GABRB3-220ENST00000636512 PELP1Q8IZL8 1130 aaKnown RBP2.79□□□□□ -1.96
GABRB3-220ENST00000636512 BEGAINQ9BUH8 593 aa2.79□□□□□ -1.96
GABRB3-220ENST00000636512 POLR3EQ9NVU0 708 aa2.79□□□□□ -1.96
GABRB3-220ENST00000636512 COG6Q9Y2V7 657 aa2.79□□□□□ -1.96
GABRB3-220ENST00000636512 PRKAR2AP13861 404 aaKnown RBP2.78□□□□□ -1.96
GABRB3-220ENST00000636512 HSP90B1P14625 803 aaKnown RBP2.78□□□□□ -1.96
GABRB3-220ENST00000636512 CDK11BP21127 795 aaKnown RBP2.78□□□□□ -1.96
GABRB3-220ENST00000636512 OSBPP22059 807 aa2.78□□□□□ -1.96
GABRB3-220ENST00000636512 FECHP22830 423 aa2.78□□□□□ -1.96
GABRB3-220ENST00000636512 ABL2P42684 1182 aa2.78□□□□□ -1.96
GABRB3-220ENST00000636512 CLK2P49760 499 aaKnown RBP2.78□□□□□ -1.96
GABRB3-220ENST00000636512 MDM2Q00987 491 aaPredicted RBP2.78□□□□□ -1.96
GABRB3-220ENST00000636512 MYT1Q01538 1121 aa2.78□□□□□ -1.96
GABRB3-220ENST00000636512 IRF5Q13568 498 aa2.78□□□□□ -1.96
GABRB3-220ENST00000636512 CCDC27Q2M243 656 aa2.78□□□□□ -1.96
GABRB3-220ENST00000636512 PROCA1Q8NCQ7 364 aaPredicted RBP2.78□□□□□ -1.96
GABRB3-220ENST00000636512 DDX12PQ92771 950 aa2.78□□□□□ -1.96
GABRB3-220ENST00000636512 USP35Q9P2H5 1018 aa2.78□□□□□ -1.96
GABRB3-220ENST00000636512 CDK11AQ9UQ88 783 aaPredicted RBP2.78□□□□□ -1.96
GABRB3-220ENST00000636512 AMOTL2Q9Y2J4 779 aa2.78□□□□□ -1.96
GABRB3-220ENST00000636512 LOC105371045A0A1W2PR82 267 aa2.77□□□□□ -1.97
GABRB3-220ENST00000636512 PTGER2P43116 358 aa2.77□□□□□ -1.97
GABRB3-220ENST00000636512 PTGDRQ13258 359 aa2.77□□□□□ -1.97
GABRB3-220ENST00000636512 UPF1Q92900 1129 aaKnown RBP eCLIP2.77□□□□□ -1.97
GABRB3-220ENST00000636512 PBXIP1Q96AQ6 731 aa2.77□□□□□ -1.97
GABRB3-220ENST00000636512 ZRANB1Q9UGI0 708 aa2.77□□□□□ -1.97
GABRB3-220ENST00000636512 USTQ9Y2C2 406 aa2.77□□□□□ -1.97
GABRB3-220ENST00000636512 OATP04181 439 aa2.76□□□□□ -1.97
GABRB3-220ENST00000636512 RFX1P22670 979 aa2.76□□□□□ -1.97
GABRB3-220ENST00000636512 RFC5P40937 340 aa2.76□□□□□ -1.97
GABRB3-220ENST00000636512 GDPD2Q9HCC8 539 aa2.76□□□□□ -1.97
GABRB3-220ENST00000636512 MAP3K7O43318 606 aa2.75□□□□□ -1.97
GABRB3-220ENST00000636512 IGSF3O75054 1194 aa2.75□□□□□ -1.97
GABRB3-220ENST00000636512 WASHC4Q2M389 1173 aa2.75□□□□□ -1.97
GABRB3-220ENST00000636512 RSPH4AQ5TD94 716 aa2.75□□□□□ -1.97
GABRB3-220ENST00000636512 MYSM1Q5VVJ2 828 aa2.75□□□□□ -1.97
GABRB3-220ENST00000636512 B4GALNT3Q6L9W6 998 aa2.75□□□□□ -1.97
GABRB3-220ENST00000636512 MICALL2Q8IY33 904 aa2.75□□□□□ -1.97
GABRB3-220ENST00000636512 OXER1Q8TDS5 423 aa2.75□□□□□ -1.97
GABRB3-220ENST00000636512 GLMNQ92990 594 aa2.75□□□□□ -1.97
GABRB3-220ENST00000636512 ZNF428Q96B54 188 aa2.75□□□□□ -1.97
GABRB3-220ENST00000636512 EPAS1Q99814 870 aa2.75□□□□□ -1.97
GABRB3-220ENST00000636512 REPIN1Q9BWE0 567 aaKnown RBP2.75□□□□□ -1.97
GABRB3-220ENST00000636512 SNRKQ9NRH2 765 aa2.75□□□□□ -1.97
GABRB3-220ENST00000636512 C2orf72A6NCS6 295 aa2.74□□□□□ -1.97
GABRB3-220ENST00000636512 EVI5O60447 810 aa2.74□□□□□ -1.97
GABRB3-220ENST00000636512 HDGFL1Q5TGJ6 251 aa2.74□□□□□ -1.97
GABRB3-220ENST00000636512 NUTM1Q86Y26 1132 aa2.74□□□□□ -1.97
GABRB3-220ENST00000636512 GNL3Q9BVP2 549 aaKnown RBP eCLIP2.74□□□□□ -1.97
GABRB3-220ENST00000636512 TMUB1Q9BVT8 246 aa2.74□□□□□ -1.97
GABRB3-220ENST00000636512 TBC1D2Q9BYX2 928 aa2.74□□□□□ -1.97
GABRB3-220ENST00000636512 FAM217BQ9NTX9 383 aaPredicted RBP2.74□□□□□ -1.97
GABRB3-220ENST00000636512 IVNS1ABPQ9Y6Y0 642 aa2.74□□□□□ -1.97
GABRB3-220ENST00000636512 NUTM2BA6NNL0 878 aaPredicted RBP2.73□□□□□ -1.97
GABRB3-220ENST00000636512 NUTM2EB1AL46 878 aaPredicted RBP2.73□□□□□ -1.97
GABRB3-220ENST00000636512 AP1G2O75843 785 aa2.73□□□□□ -1.97
GABRB3-220ENST00000636512 CD44P16070 742 aaKnown RBP2.73□□□□□ -1.97
GABRB3-220ENST00000636512 TIE1P35590 1138 aa2.73□□□□□ -1.97
GABRB3-220ENST00000636512 CSPP1Q1MSJ5 1256 aa2.73□□□□□ -1.97
GABRB3-220ENST00000636512 NUTM2DQ5VT03 806 aaPredicted RBP2.73□□□□□ -1.97
GABRB3-220ENST00000636512 PPP2R2DQ66LE6 453 aa2.73□□□□□ -1.97
GABRB3-220ENST00000636512 SND1Q7KZF4 910 aaKnown RBP eCLIP2.73□□□□□ -1.97
GABRB3-220ENST00000636512 RIC3Q7Z5B4 369 aa2.73□□□□□ -1.97
GABRB3-220ENST00000636512 NUTM2AQ8IVF1 878 aaPredicted RBP2.73□□□□□ -1.97
GABRB3-220ENST00000636512 CERKQ8TCT0 537 aa2.73□□□□□ -1.97
GABRB3-220ENST00000636512 BCL11AQ9H165 835 aa2.73□□□□□ -1.97
GABRB3-220ENST00000636512 VRTNQ9H8Y1 702 aa2.73□□□□□ -1.97
GABRB3-220ENST00000636512 BOLA1Q9Y3E2 137 aa2.73□□□□□ -1.97
GABRB3-220ENST00000636512 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.72□□□□□ -1.97
GABRB3-220ENST00000636512 SOCS7O14512 581 aa2.72□□□□□ -1.97
GABRB3-220ENST00000636512 PHF14O94880 888 aa2.72□□□□□ -1.97
GABRB3-220ENST00000636512 LMOD1P29536 600 aaPredicted RBP2.72□□□□□ -1.97
GABRB3-220ENST00000636512 EN1Q05925 392 aaPredicted RBP2.72□□□□□ -1.97
GABRB3-220ENST00000636512 PNMA1Q8ND90 353 aa2.72□□□□□ -1.97
GABRB3-220ENST00000636512 RBM46Q8TBY0 533 aaKnown RBP2.72□□□□□ -1.97
GABRB3-220ENST00000636512 CCER1Q8TC90 406 aaPredicted RBP2.72□□□□□ -1.97
GABRB3-220ENST00000636512 RBM33Q96EV2 1170 aaKnown RBP2.72□□□□□ -1.97
GABRB3-220ENST00000636512 PUS7Q96PZ0 661 aaKnown RBP2.72□□□□□ -1.97
GABRB3-220ENST00000636512 PHF12Q96QT6 1004 aa2.72□□□□□ -1.97
GABRB3-220ENST00000636512 NDUFB9Q9Y6M9 179 aa2.72□□□□□ -1.97
GABRB3-220ENST00000636512 POM121CA8CG34 1229 aa2.71□□□□□ -1.98
GABRB3-220ENST00000636512 ERCC3P19447 782 aa2.71□□□□□ -1.98
GABRB3-220ENST00000636512 DPY19L2Q6NUT2 758 aa2.71□□□□□ -1.98
GABRB3-220ENST00000636512 METTL3Q86U44 580 aaKnown RBP2.71□□□□□ -1.98
GABRB3-220ENST00000636512 SULF1Q8IWU6 871 aa2.71□□□□□ -1.98
GABRB3-220ENST00000636512 ZNF710Q8N1W2 664 aa2.71□□□□□ -1.98
GABRB3-220ENST00000636512 MTMR14Q8NCE2 650 aa2.71□□□□□ -1.98
GABRB3-220ENST00000636512 L3MBTL3Q96JM7 780 aaPredicted RBP2.71□□□□□ -1.98
GABRB3-220ENST00000636512 PPP1R12CQ9BZL4 782 aa2.71□□□□□ -1.98
GABRB3-220ENST00000636512 TRIM35Q9UPQ4 493 aa2.71□□□□□ -1.98
GABRB3-220ENST00000636512 TBC1D2BQ9UPU7 963 aa2.71□□□□□ -1.98
GABRB3-220ENST00000636512 TTBK1Q5TCY1 1321 aaPredicted RBP2.7□□□□□ -1.98
GABRB3-220ENST00000636512 TTLL13PA6NNM8 815 aa2.7□□□□□ -1.98
GABRB3-220ENST00000636512 KIF3CO14782 793 aa2.7□□□□□ -1.98
GABRB3-220ENST00000636512 FXR2P51116 673 aaKnown RBP eCLIP2.7□□□□□ -1.98
GABRB3-220ENST00000636512 SEMA3FQ13275 785 aa2.7□□□□□ -1.98
GABRB3-220ENST00000636512 TUSC1Q2TAM9 212 aa2.7□□□□□ -1.98
GABRB3-220ENST00000636512 TYW1BQ6NUM6 668 aa2.7□□□□□ -1.98
GABRB3-220ENST00000636512 ILDR1Q86SU0 546 aaPredicted RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms