RNA–Protein interactions for RNA: ENST00000636367.1

SMARCA2-250, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-250ENST00000636367 PHOX2BQ99453 314 aa11.93□□□□□ -0.5
SMARCA2-250ENST00000636367 TMEM106CQ9BVX2 250 aa11.93□□□□□ -0.5
SMARCA2-250ENST00000636367 MAP3K9P80192 1104 aa11.92□□□□□ -0.5
SMARCA2-250ENST00000636367 FOXK1P85037 733 aa11.92□□□□□ -0.5
SMARCA2-250ENST00000636367 BEGAINQ9BUH8 593 aa11.92□□□□□ -0.5
SMARCA2-250ENST00000636367 SSTR3P32745 418 aaPredicted RBP11.91□□□□□ -0.5
SMARCA2-250ENST00000636367 PLPP6Q8IY26 295 aa11.91□□□□□ -0.5
SMARCA2-250ENST00000636367 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.91□□□□□ -0.5
SMARCA2-250ENST00000636367 PAK3O75914 559 aaPredicted RBP11.9□□□□□ -0.5
SMARCA2-250ENST00000636367 GDPD2Q9HCC8 539 aa11.9□□□□□ -0.5
SMARCA2-250ENST00000636367 CARNS1A5YM72 827 aa11.89□□□□□ -0.51
SMARCA2-250ENST00000636367 POM121CA8CG34 1229 aa11.89□□□□□ -0.51
SMARCA2-250ENST00000636367 PPP1R15AO75807 674 aaPredicted RBP11.89□□□□□ -0.51
SMARCA2-250ENST00000636367 UPF1Q92900 1129 aaKnown RBP eCLIP11.89□□□□□ -0.51
SMARCA2-250ENST00000636367 CALR3Q96L12 384 aaKnown RBP11.89□□□□□ -0.51
SMARCA2-250ENST00000636367 GPCPD1Q9NPB8 672 aa11.89□□□□□ -0.51
SMARCA2-250ENST00000636367 TRPC6Q9Y210 931 aa11.89□□□□□ -0.51
SMARCA2-250ENST00000636367 CLCN1P35523 988 aa11.89□□□□□ -0.51
SMARCA2-250ENST00000636367 TMC2Q8TDI7 906 aa11.88□□□□□ -0.51
SMARCA2-250ENST00000636367 ACIN1Q9UKV3 1341 aaKnown RBP11.87□□□□□ -0.51
SMARCA2-250ENST00000636367 UNC13AQ9UPW8 1703 aa11.87□□□□□ -0.51
SMARCA2-250ENST00000636367 RFC5P40937 340 aa11.87□□□□□ -0.51
SMARCA2-250ENST00000636367 MYSM1Q5VVJ2 828 aa11.87□□□□□ -0.51
SMARCA2-250ENST00000636367 SCRIBQ14160 1630 aa11.87□□□□□ -0.51
SMARCA2-250ENST00000636367 NLRP7Q8WX94 980 aa11.86□□□□□ -0.51
SMARCA2-250ENST00000636367 GLMNQ92990 594 aa11.86□□□□□ -0.51
SMARCA2-250ENST00000636367 DPY19L2Q6NUT2 758 aa11.85□□□□□ -0.51
SMARCA2-250ENST00000636367 PRKAR2AP13861 404 aaKnown RBP11.85□□□□□ -0.51
SMARCA2-250ENST00000636367 TBC1D12O60347 775 aa11.84□□□□□ -0.51
SMARCA2-250ENST00000636367 CDHR5Q9HBB8 845 aa11.84□□□□□ -0.51
SMARCA2-250ENST00000636367 ABL2P42684 1182 aa11.83□□□□□ -0.52
SMARCA2-250ENST00000636367 MTMR14Q8NCE2 650 aa11.83□□□□□ -0.52
SMARCA2-250ENST00000636367 PHF12Q96QT6 1004 aa11.83□□□□□ -0.52
SMARCA2-250ENST00000636367 CLK2P49760 499 aaKnown RBP11.82□□□□□ -0.52
SMARCA2-250ENST00000636367 MICALL2Q8IY33 904 aa11.82□□□□□ -0.52
SMARCA2-250ENST00000636367 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.82□□□□□ -0.522e-8■■■■□ 21
SMARCA2-250ENST00000636367 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.81□□□□□ -0.52
SMARCA2-250ENST00000636367 KCNA1Q09470 495 aa11.81□□□□□ -0.52
SMARCA2-250ENST00000636367 PTGER2P43116 358 aa11.8□□□□□ -0.52
SMARCA2-250ENST00000636367 BANK1Q8NDB2 785 aa11.8□□□□□ -0.52
SMARCA2-250ENST00000636367 C2orf72A6NCS6 295 aa11.8□□□□□ -0.52
SMARCA2-250ENST00000636367 BRD1O95696 1058 aa11.8□□□□□ -0.52
SMARCA2-250ENST00000636367 RFX1P22670 979 aa11.8□□□□□ -0.52
SMARCA2-250ENST00000636367 FAM217BQ9NTX9 383 aaPredicted RBP11.8□□□□□ -0.52
SMARCA2-250ENST00000636367 USP35Q9P2H5 1018 aa11.8□□□□□ -0.52
SMARCA2-250ENST00000636367 ILDR1Q86SU0 546 aaPredicted RBP11.79□□□□□ -0.52
SMARCA2-250ENST00000636367 FAM161AQ3B820 660 aa11.78□□□□□ -0.52
SMARCA2-250ENST00000636367 IVNS1ABPQ9Y6Y0 642 aa11.77□□□□□ -0.53
SMARCA2-250ENST00000636367 PATL2C9JE40 543 aaKnown RBP11.76□□□□□ -0.53
SMARCA2-250ENST00000636367 CCDC27Q2M243 656 aa11.76□□□□□ -0.53
SMARCA2-250ENST00000636367 PBXIP1Q96AQ6 731 aa11.76□□□□□ -0.53
SMARCA2-250ENST00000636367 NPDC1Q9NQX5 325 aaPredicted RBP11.76□□□□□ -0.53
SMARCA2-250ENST00000636367 TBC1D2BQ9UPU7 963 aa11.76□□□□□ -0.53
SMARCA2-250ENST00000636367 PDE4CQ08493 712 aa11.76□□□□□ -0.53
SMARCA2-250ENST00000636367 BICRAQ9NZM4 1560 aa11.75□□□□□ -0.53
SMARCA2-250ENST00000636367 LIMD1Q9UGP4 676 aa11.75□□□□□ -0.53
SMARCA2-250ENST00000636367 CACNB1Q02641 598 aaPredicted RBP11.74□□□□□ -0.53
SMARCA2-250ENST00000636367 TBC1D2Q9BYX2 928 aa11.73□□□□□ -0.53
SMARCA2-250ENST00000636367 ADAMTS19Q8TE59 1207 aa11.72□□□□□ -0.53
SMARCA2-250ENST00000636367 ZRANB1Q9UGI0 708 aa11.72□□□□□ -0.53
SMARCA2-250ENST00000636367 MYT1LQ9UL68 1186 aa11.72□□□□□ -0.53
SMARCA2-250ENST00000636367 UNCXA6NJT0 531 aa11.72□□□□□ -0.53
SMARCA2-250ENST00000636367 KIF3CO14782 793 aa11.72□□□□□ -0.53
SMARCA2-250ENST00000636367 USTQ9Y2C2 406 aa11.72□□□□□ -0.53
SMARCA2-250ENST00000636367 CSB-PGBD3P0DP91 1061 aa11.71□□□□□ -0.53
SMARCA2-250ENST00000636367 AMOTL2Q9Y2J4 779 aa11.71□□□□□ -0.53
SMARCA2-250ENST00000636367 TMEM259Q4ZIN3 620 aa11.7□□□□□ -0.54
SMARCA2-250ENST00000636367 WWC1Q8IX03 1113 aa11.7□□□□□ -0.54
SMARCA2-250ENST00000636367 CFAP70Q5T0N1 1121 aa11.7□□□□□ -0.54
SMARCA2-250ENST00000636367 EVI5O60447 810 aa11.69□□□□□ -0.54
SMARCA2-250ENST00000636367 SND1Q7KZF4 910 aaKnown RBP eCLIP11.69□□□□□ -0.54
SMARCA2-250ENST00000636367 CDK11BP21127 795 aaKnown RBP11.68□□□□□ -0.54
SMARCA2-250ENST00000636367 MS4A3Q96HJ5 214 aa11.68□□□□□ -0.54
SMARCA2-250ENST00000636367 CDK11AQ9UQ88 783 aaPredicted RBP11.68□□□□□ -0.54
SMARCA2-250ENST00000636367 PPP2R2DQ66LE6 453 aa11.68□□□□□ -0.54
SMARCA2-250ENST00000636367 HSP90B1P14625 803 aaKnown RBP11.67□□□□□ -0.54
SMARCA2-250ENST00000636367 SRPK2P78362 688 aaKnown RBP11.67□□□□□ -0.54
SMARCA2-250ENST00000636367 HDGFL1Q5TGJ6 251 aa11.67□□□□□ -0.54
SMARCA2-250ENST00000636367 METTL3Q86U44 580 aaKnown RBP11.66□□□□□ -0.54
SMARCA2-250ENST00000636367 CSPP1Q1MSJ5 1256 aa11.64□□□□□ -0.55
SMARCA2-250ENST00000636367 TSR1Q2NL82 804 aaKnown RBP11.64□□□□□ -0.55
SMARCA2-250ENST00000636367 RBM33Q96EV2 1170 aaKnown RBP11.64□□□□□ -0.55
SMARCA2-250ENST00000636367 TTLL13PA6NNM8 815 aa11.63□□□□□ -0.55
SMARCA2-250ENST00000636367 MAP3K7O43318 606 aa11.63□□□□□ -0.55
SMARCA2-250ENST00000636367 EN1Q05925 392 aaPredicted RBP11.63□□□□□ -0.55
SMARCA2-250ENST00000636367 PUS7Q96PZ0 661 aaKnown RBP11.63□□□□□ -0.55
SMARCA2-250ENST00000636367 HMGB1P09429 215 aaKnown RBP11.61□□□□□ -0.55
SMARCA2-250ENST00000636367 RIC3Q7Z5B4 369 aa11.61□□□□□ -0.55
SMARCA2-250ENST00000636367 AP1G2O75843 785 aa11.6□□□□□ -0.55
SMARCA2-250ENST00000636367 PDCD7Q8N8D1 485 aaKnown RBP11.6□□□□□ -0.55
SMARCA2-250ENST00000636367 QPCTQ16769 361 aa11.59□□□□□ -0.55
SMARCA2-250ENST00000636367 CDCA8Q53HL2 280 aa11.59□□□□□ -0.55
SMARCA2-250ENST00000636367 PPP1R12CQ9BZL4 782 aa11.58□□□□□ -0.56
SMARCA2-250ENST00000636367 VRTNQ9H8Y1 702 aa11.58□□□□□ -0.56
SMARCA2-250ENST00000636367 CD44P16070 742 aaKnown RBP11.57□□□□□ -0.56
SMARCA2-250ENST00000636367 TMEM92Q6UXU6 159 aa11.57□□□□□ -0.56
SMARCA2-250ENST00000636367 PXYLP1Q8TE99 480 aa11.57□□□□□ -0.56
SMARCA2-250ENST00000636367 SPIRE2Q8WWL2 714 aa11.57□□□□□ -0.56
SMARCA2-250ENST00000636367 TMEM88BA6NKF7 163 aa11.57□□□□□ -0.56
SMARCA2-250ENST00000636367 FXR2P51116 673 aaKnown RBP eCLIP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms