RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 SLC4A1APQ9BWU0 796 aaKnown RBP14.53□□□□□ -0.08
CHD2-223ENST00000636306 MBD5Q9P267 1494 aa14.53□□□□□ -0.08
CHD2-223ENST00000636306 SYCP2Q9BX26 1530 aa14.53□□□□□ -0.08
CHD2-223ENST00000636306 KIF15Q9NS87 1388 aa14.51□□□□□ -0.09
CHD2-223ENST00000636306 TEX14Q8IWB6 1497 aa14.5□□□□□ -0.09
CHD2-223ENST00000636306 UNC13BO14795 1591 aa14.5□□□□□ -0.09
CHD2-223ENST00000636306 PPM1GO15355 546 aaPredicted RBP14.5□□□□□ -0.09
CHD2-223ENST00000636306 ABCC1P33527 1531 aa14.47□□□□□ -0.09
CHD2-223ENST00000636306 PLCH2O75038 1416 aa14.47□□□□□ -0.09
CHD2-223ENST00000636306 IRX6P78412 446 aaPredicted RBP14.47□□□□□ -0.09
CHD2-223ENST00000636306 POLR1AO95602 1720 aaPredicted RBP14.46□□□□□ -0.09
CHD2-223ENST00000636306 ARHGEF12Q9NZN5 1544 aa14.46□□□□□ -0.09
CHD2-223ENST00000636306 DUOX2Q9NRD8 1548 aa14.46□□□□□ -0.1
CHD2-223ENST00000636306 HNRNPUQ00839 825 aaKnown RBP eCLIP14.45□□□□□ -0.1
CHD2-223ENST00000636306 WDR7Q9Y4E6 1490 aa14.44□□□□□ -0.1
CHD2-223ENST00000636306 NUP155O75694 1391 aa14.43□□□□□ -0.1
CHD2-223ENST00000636306 FAM43AQ8N2R8 423 aa14.43□□□□□ -0.1
CHD2-223ENST00000636306 ERBINQ96RT1 1412 aa14.43□□□□□ -0.1
CHD2-223ENST00000636306 IQGAP3Q86VI3 1631 aa14.43□□□□□ -0.1
CHD2-223ENST00000636306 ABCA9Q8IUA7 1624 aa14.43□□□□□ -0.1
CHD2-223ENST00000636306 HNRNPMP52272 730 aaKnown RBP eCLIP14.42□□□□□ -0.17e-7■■■□□ 19
CHD2-223ENST00000636306 EFCAB2Q5VUJ9 269 aa14.42□□□□□ -0.1
CHD2-223ENST00000636306 B4GALNT3Q6L9W6 998 aa14.42□□□□□ -0.1
CHD2-223ENST00000636306 FAM135AQ9P2D6 1515 aa14.42□□□□□ -0.1
CHD2-223ENST00000636306 NEFMP07197 916 aa14.42□□□□□ -0.1
CHD2-223ENST00000636306 EIF4G2P78344 907 aaKnown RBP eCLIP14.42□□□□□ -0.1
CHD2-223ENST00000636306 L3MBTL2Q969R5 705 aa14.41□□□□□ -0.1
CHD2-223ENST00000636306 CFAP74Q9C0B2 1584 aa14.4□□□□□ -0.1
CHD2-223ENST00000636306 PKD2Q13563 968 aa14.39□□□□□ -0.11
CHD2-223ENST00000636306 PODXL2Q9NZ53 605 aa14.39□□□□□ -0.11
CHD2-223ENST00000636306 MAGI2Q86UL8 1455 aa14.39□□□□□ -0.11
CHD2-223ENST00000636306 GSE1Q14687 1217 aa14.38□□□□□ -0.11
CHD2-223ENST00000636306 FOXD1Q16676 465 aa14.38□□□□□ -0.11
CHD2-223ENST00000636306 RTEL1-TNFRSF6BF6WH68 1400 aa14.38□□□□□ -0.11
CHD2-223ENST00000636306 BRPF3Q9ULD4 1205 aa14.37□□□□□ -0.11
CHD2-223ENST00000636306 UHRF1BP1Q6BDS2 1440 aa14.35□□□□□ -0.11
CHD2-223ENST00000636306 ZFYVE16Q7Z3T8 1539 aa14.35□□□□□ -0.11
CHD2-223ENST00000636306 INO80Q9ULG1 1556 aaPredicted RBP14.35□□□□□ -0.11
CHD2-223ENST00000636306 HSPA5P11021 654 aaKnown RBP14.34□□□□□ -0.11
CHD2-223ENST00000636306 RALGAPBQ86X10 1494 aa14.34□□□□□ -0.11
CHD2-223ENST00000636306 EIF2AK4Q9P2K8 1649 aaKnown RBP14.34□□□□□ -0.11
CHD2-223ENST00000636306 ZMYND15Q9H091 742 aa14.33□□□□□ -0.12
CHD2-223ENST00000636306 ZBED9Q6R2W3 1325 aa14.33□□□□□ -0.12
CHD2-223ENST00000636306 FANCAO15360 1455 aa14.32□□□□□ -0.12
CHD2-223ENST00000636306 OSCARQ8IYS5 282 aa14.32□□□□□ -0.12
CHD2-223ENST00000636306 DEPDC5O75140 1603 aa14.32□□□□□ -0.12
CHD2-223ENST00000636306 CCDC144AA2RUR9 1427 aa14.31□□□□□ -0.12
CHD2-223ENST00000636306 CNTLNQ9NXG0 1405 aa14.31□□□□□ -0.12
CHD2-223ENST00000636306 ATP7AQ04656 1500 aa14.31□□□□□ -0.12
CHD2-223ENST00000636306 ASXL2Q76L83 1435 aa14.3□□□□□ -0.12
CHD2-223ENST00000636306 ATP10AO60312 1499 aa14.3□□□□□ -0.12
CHD2-223ENST00000636306 KDM5CP41229 1560 aa14.3□□□□□ -0.12
CHD2-223ENST00000636306 RNF123Q5XPI4 1314 aa14.29□□□□□ -0.12
CHD2-223ENST00000636306 SPAG9O60271 1321 aaKnown RBP14.29□□□□□ -0.12
CHD2-223ENST00000636306 NPM1P06748 294 aaKnown RBP eCLIP14.29□□□□□ -0.12
CHD2-223ENST00000636306 HIRIP3Q9BW71 556 aaPredicted RBP14.29□□□□□ -0.12
CHD2-223ENST00000636306 LAMC1P11047 1609 aa14.28□□□□□ -0.12
CHD2-223ENST00000636306 ADGRL1O94910 1474 aa14.28□□□□□ -0.12
CHD2-223ENST00000636306 SPATA31E1Q6ZUB1 1445 aa14.28□□□□□ -0.12
CHD2-223ENST00000636306 TRAPPC8Q9Y2L5 1435 aa14.28□□□□□ -0.12
CHD2-223ENST00000636306 CCDC7Q96M83 1385 aa14.28□□□□□ -0.12
CHD2-223ENST00000636306 TCERG1O14776 1098 aaKnown RBP14.27□□□□□ -0.12
CHD2-223ENST00000636306 VSIG10Q8N0Z9 540 aa14.27□□□□□ -0.12
CHD2-223ENST00000636306 DDRGK1Q96HY6 314 aa14.27□□□□□ -0.12
CHD2-223ENST00000636306 TET3O43151 1660 aa14.27□□□□□ -0.12
CHD2-223ENST00000636306 ARID4BQ4LE39 1312 aaPredicted RBP14.27□□□□□ -0.13
CHD2-223ENST00000636306 NBPF8Q3BBV2 869 aa14.27□□□□□ -0.13
CHD2-223ENST00000636306 SMG6Q86US8 1419 aaKnown RBP14.26□□□□□ -0.13
CHD2-223ENST00000636306 LAS1LQ9Y4W2 734 aaKnown RBP14.26□□□□□ -0.13
CHD2-223ENST00000636306 RRP9O43818 475 aaKnown RBP14.25□□□□□ -0.13
CHD2-223ENST00000636306 TRPM1Q7Z4N2 1603 aa14.25□□□□□ -0.13
CHD2-223ENST00000636306 USP47Q96K76 1375 aa14.25□□□□□ -0.13
CHD2-223ENST00000636306 PLEKHG5O94827 1062 aa14.24□□□□□ -0.13
CHD2-223ENST00000636306 MS4A1P11836 297 aa14.24□□□□□ -0.13
CHD2-223ENST00000636306 KANK1Q14678 1352 aa14.24□□□□□ -0.13
CHD2-223ENST00000636306 SPHKAPQ2M3C7 1700 aa14.24□□□□□ -0.13
CHD2-223ENST00000636306 ZNF518AQ6AHZ1 1483 aa14.24□□□□□ -0.13
CHD2-223ENST00000636306 CEP152O94986 1710 aa14.23□□□□□ -0.13
CHD2-223ENST00000636306 ROCK2O75116 1388 aaKnown RBP14.23□□□□□ -0.13
CHD2-223ENST00000636306 TRPM2O94759 1503 aa14.23□□□□□ -0.13
CHD2-223ENST00000636306 PRDM15P57071 1507 aaPredicted RBP14.23□□□□□ -0.13
CHD2-223ENST00000636306 E9PCH4 1651 aa14.22□□□□□ -0.13
CHD2-223ENST00000636306 FRAT1Q92837 279 aaPredicted RBP14.22□□□□□ -0.13
CHD2-223ENST00000636306 VWDEQ8N2E2 1590 aa14.21□□□□□ -0.13
CHD2-223ENST00000636306 SCAPERQ9BY12 1400 aa14.21□□□□□ -0.13
CHD2-223ENST00000636306 NEURL4Q96JN8 1562 aa14.2□□□□□ -0.14
CHD2-223ENST00000636306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.19□□□□□ -0.141e-7■■□□□ 14.3
CHD2-223ENST00000636306 PRAG1Q86YV5 1406 aa14.19□□□□□ -0.14
CHD2-223ENST00000636306 ZNF326Q5BKZ1 582 aaKnown RBP14.19□□□□□ -0.14
CHD2-223ENST00000636306 RNF17Q9BXT8 1623 aaKnown RBP14.19□□□□□ -0.14
CHD2-223ENST00000636306 HECW2Q9P2P5 1572 aa14.18□□□□□ -0.14
CHD2-223ENST00000636306 NFKBIBQ15653 356 aa14.18□□□□□ -0.14
CHD2-223ENST00000636306 KIDINS220Q9ULH0 1771 aa14.18□□□□□ -0.14
CHD2-223ENST00000636306 BCORL1Q5H9F3 1711 aa14.18□□□□□ -0.14
CHD2-223ENST00000636306 PLA2R1Q13018 1463 aa14.18□□□□□ -0.14
CHD2-223ENST00000636306 KIF7Q2M1P5 1343 aa14.17□□□□□ -0.14
CHD2-223ENST00000636306 A2MP01023 1474 aa14.17□□□□□ -0.14
CHD2-223ENST00000636306 NEO1Q92859 1461 aa14.17□□□□□ -0.14
CHD2-223ENST00000636306 PDE4AP27815 886 aa14.17□□□□□ -0.14
CHD2-223ENST00000636306 STAC3Q96MF2 364 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms