RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 PRIM1P49642 420 aaKnown RBP4.98□□□□□ -1.61
CD46-219ENST00000636114 RBM33Q96EV2 1170 aaKnown RBP4.98□□□□□ -1.61
CD46-219ENST00000636114 TPRNQ4KMQ1 711 aa4.97□□□□□ -1.61
CD46-219ENST00000636114 VARS2Q5ST30 1063 aaKnown RBP4.97□□□□□ -1.61
CD46-219ENST00000636114 ADAM33Q9BZ11 813 aa4.97□□□□□ -1.61
CD46-219ENST00000636114 ZC3H15Q8WU90 426 aaKnown RBP4.96□□□□□ -1.61
CD46-219ENST00000636114 BCL2L12Q9HB09 334 aa4.96□□□□□ -1.61
CD46-219ENST00000636114 FAM205CA6NFA0 338 aa4.95□□□□□ -1.62
CD46-219ENST00000636114 TSR1Q2NL82 804 aaKnown RBP4.95□□□□□ -1.62
CD46-219ENST00000636114 C6orf132Q5T0Z8 1188 aa4.95□□□□□ -1.62
CD46-219ENST00000636114 GPR37O15354 613 aa4.95□□□□□ -1.62
CD46-219ENST00000636114 FCHSD2O94868 740 aa4.95□□□□□ -1.62
CD46-219ENST00000636114 PTPREP23469 700 aa4.95□□□□□ -1.62
CD46-219ENST00000636114 PTGDRQ13258 359 aa4.95□□□□□ -1.62
CD46-219ENST00000636114 KCNH8Q96L42 1107 aa4.95□□□□□ -1.62
CD46-219ENST00000636114 CDHR5Q9HBB8 845 aa4.95□□□□□ -1.62
CD46-219ENST00000636114 CERKQ8TCT0 537 aa4.94□□□□□ -1.62
CD46-219ENST00000636114 HS3ST6Q96QI5 342 aa4.94□□□□□ -1.62
CD46-219ENST00000636114 ZMYND10O75800 440 aa4.93□□□□□ -1.62
CD46-219ENST00000636114 HIC1Q14526 733 aa4.93□□□□□ -1.62
CD46-219ENST00000636114 PPP1R3GB7ZBB8 358 aa4.93□□□□□ -1.62
CD46-219ENST00000636114 PBX2P40425 430 aa4.93□□□□□ -1.62
CD46-219ENST00000636114 ZNF687Q8N1G0 1237 aa4.93□□□□□ -1.62
CD46-219ENST00000636114 KCNK17Q96T54 332 aa4.93□□□□□ -1.62
CD46-219ENST00000636114 NPDC1Q9NQX5 325 aaPredicted RBP4.93□□□□□ -1.62
CD46-219ENST00000636114 GNPATO15228 680 aa4.92□□□□□ -1.62
CD46-219ENST00000636114 PRKCSHP14314 528 aaPredicted RBP4.92□□□□□ -1.62
CD46-219ENST00000636114 ARHGAP33O14559 1287 aa4.92□□□□□ -1.62
CD46-219ENST00000636114 BARGINQ6ZT62 677 aa4.92□□□□□ -1.62
CD46-219ENST00000636114 RBM27Q9P2N5 1060 aaKnown RBP4.92□□□□□ -1.62
CD46-219ENST00000636114 POTEB3A0JP26 581 aa4.91□□□□□ -1.62
CD46-219ENST00000636114 COL9A1P20849 921 aa4.91□□□□□ -1.62
CD46-219ENST00000636114 POTEBQ6S5H4 581 aa4.91□□□□□ -1.62
CD46-219ENST00000636114 PSEN2P49810 448 aa4.9□□□□□ -1.63
CD46-219ENST00000636114 PRSS12P56730 875 aa4.9□□□□□ -1.63
CD46-219ENST00000636114 POTEEQ6S8J3 1075 aa4.9□□□□□ -1.63
CD46-219ENST00000636114 MAP2K5Q13163 448 aa4.89□□□□□ -1.63
CD46-219ENST00000636114 PADI6Q6TGC4 694 aa4.89□□□□□ -1.63
CD46-219ENST00000636114 KRI1Q8N9T8 703 aaKnown RBP4.89□□□□□ -1.63
CD46-219ENST00000636114 AXIN2Q9Y2T1 843 aa4.89□□□□□ -1.63
CD46-219ENST00000636114 FECHP22830 423 aa4.88□□□□□ -1.63
CD46-219ENST00000636114 CDCA7LQ96GN5 454 aa4.88□□□□□ -1.63
CD46-219ENST00000636114 MINK1Q8N4C8 1332 aaPredicted RBP4.88□□□□□ -1.63
CD46-219ENST00000636114 ZBED2Q9BTP6 218 aa4.88□□□□□ -1.63
CD46-219ENST00000636114 TRIM6-TRIM34B2RNG4 842 aa4.87□□□□□ -1.63
CD46-219ENST00000636114 DMRTA1Q5VZB9 504 aa4.87□□□□□ -1.63
CD46-219ENST00000636114 TTC13Q8NBP0 860 aa4.87□□□□□ -1.63
CD46-219ENST00000636114 SLC4A5Q9BY07 1137 aa4.87□□□□□ -1.63
CD46-219ENST00000636114 SLC24A3Q9HC58 644 aa4.87□□□□□ -1.63
CD46-219ENST00000636114 IRF6O14896 467 aa4.87□□□□□ -1.63
CD46-219ENST00000636114 ONECUT3O60422 494 aaPredicted RBP4.87□□□□□ -1.63
CD46-219ENST00000636114 LSM11P83369 360 aaKnown RBP eCLIP4.87□□□□□ -1.63
CD46-219ENST00000636114 PROX2Q3B8N5 592 aa4.87□□□□□ -1.63
CD46-219ENST00000636114 TSKSQ9UJT2 592 aa4.87□□□□□ -1.63
CD46-219ENST00000636114 PACS2Q86VP3 889 aa4.86□□□□□ -1.63
CD46-219ENST00000636114 CCDC102AQ96A19 550 aa4.86□□□□□ -1.63
CD46-219ENST00000636114 AK7Q96M32 723 aa4.86□□□□□ -1.63
CD46-219ENST00000636114 NBPF26B4DH59 902 aa4.85□□□□□ -1.63
CD46-219ENST00000636114 TK2O00142 265 aa4.85□□□□□ -1.63
CD46-219ENST00000636114 FAM198AQ9UFP1 575 aa4.85□□□□□ -1.63
CD46-219ENST00000636114 RABGEF1Q9UJ41 708 aa4.85□□□□□ -1.63
CD46-219ENST00000636114 OATP04181 439 aa4.85□□□□□ -1.63
CD46-219ENST00000636114 VPS9D1Q9Y2B5 631 aa4.85□□□□□ -1.63
CD46-219ENST00000636114 ADGRG1Q9Y653 693 aa4.85□□□□□ -1.63
CD46-219ENST00000636114 RBM46Q8TBY0 533 aaKnown RBP4.84□□□□□ -1.63
CD46-219ENST00000636114 KIAA1468Q9P260 1216 aa4.84□□□□□ -1.63
CD46-219ENST00000636114 ADGRD1Q6QNK2 874 aa4.84□□□□□ -1.64
CD46-219ENST00000636114 METTL3Q86U44 580 aaKnown RBP4.84□□□□□ -1.64
CD46-219ENST00000636114 KRTAP3-3Q9BYR6 98 aa4.84□□□□□ -1.64
CD46-219ENST00000636114 KRTAP3-2Q9BYR7 98 aa4.84□□□□□ -1.64
CD46-219ENST00000636114 FAM161AQ3B820 660 aa4.83□□□□□ -1.64
CD46-219ENST00000636114 NUDT18Q6ZVK8 323 aa4.83□□□□□ -1.64
CD46-219ENST00000636114 PXYLP1Q8TE99 480 aa4.83□□□□□ -1.64
CD46-219ENST00000636114 TATDN2Q93075 761 aa4.83□□□□□ -1.64
CD46-219ENST00000636114 NBPF3Q9H094 633 aa4.83□□□□□ -1.64
CD46-219ENST00000636114 TRIM66O15016 1216 aa4.82□□□□□ -1.64
CD46-219ENST00000636114 ANKRD13DQ6ZTN6 518 aa4.82□□□□□ -1.64
CD46-219ENST00000636114 PNMA3Q9UL41 463 aa4.82□□□□□ -1.64
CD46-219ENST00000636114 BHMG1C9JSJ3 638 aaPredicted RBP4.82□□□□□ -1.64
CD46-219ENST00000636114 AMHR2Q16671 573 aa4.82□□□□□ -1.64
CD46-219ENST00000636114 EYA1Q99502 592 aa4.82□□□□□ -1.64
CD46-219ENST00000636114 C3orf80F5H4A9 247 aa4.81□□□□□ -1.64
CD46-219ENST00000636114 PHOX2BQ99453 314 aa4.81□□□□□ -1.64
CD46-219ENST00000636114 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.81□□□□□ -1.64
CD46-219ENST00000636114 HRO43593 1189 aa4.81□□□□□ -1.64
CD46-219ENST00000636114 FAM98CQ17RN3 349 aaKnown RBP4.81□□□□□ -1.64
CD46-219ENST00000636114 LAPTM4BQ86VI4 370 aa4.81□□□□□ -1.64
CD46-219ENST00000636114 MRPL50Q8N5N7 158 aaKnown RBP4.81□□□□□ -1.64
CD46-219ENST00000636114 SMAPO00193 183 aa4.8□□□□□ -1.64
CD46-219ENST00000636114 DNAJB2P25686 324 aa4.8□□□□□ -1.64
CD46-219ENST00000636114 PDE4DQ08499 809 aa4.8□□□□□ -1.64
CD46-219ENST00000636114 SEPT9Q9UHD8 586 aaPredicted RBP4.8□□□□□ -1.64
CD46-219ENST00000636114 RCCD1A6NED2 376 aa4.79□□□□□ -1.64
CD46-219ENST00000636114 TTLL12Q14166 644 aaPredicted RBP4.79□□□□□ -1.64
CD46-219ENST00000636114 STAC3Q96MF2 364 aa4.79□□□□□ -1.64
CD46-219ENST00000636114 CLCN1P35523 988 aa4.79□□□□□ -1.64
CD46-219ENST00000636114 PARP9Q8IXQ6 854 aa4.79□□□□□ -1.64
CD46-219ENST00000636114 BRPF1P55201 1214 aaPredicted RBP4.78□□□□□ -1.64
CD46-219ENST00000636114 MDM2Q00987 491 aaPredicted RBP4.78□□□□□ -1.64
CD46-219ENST00000636114 NEUROD2Q15784 382 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms