RNA–Protein interactions for RNA: ENST00000636023.1

AMT-228, Transcript of aminomethyltransferase, humanhuman

TSL 5

Gene AMT, Length 1,780 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMT-228ENST00000636023 FAM135AQ9P2D6 1515 aa22.57■■□□□ 1.2
AMT-228ENST00000636023 FBXO31Q5XUX0 539 aaPredicted RBP22.56■■□□□ 1.2
AMT-228ENST00000636023 KDM5DQ9BY66 1539 aa22.56■■□□□ 1.2
AMT-228ENST00000636023 DISP3Q9P2K9 1392 aa22.55■■□□□ 1.2
AMT-228ENST00000636023 PZPP20742 1482 aa22.55■■□□□ 1.2
AMT-228ENST00000636023 TSPY4P0CV99 314 aa22.54■■□□□ 1.2
AMT-228ENST00000636023 TSPY10P0CW01 314 aa22.54■■□□□ 1.2
AMT-228ENST00000636023 TNRQ92752 1358 aa22.54■■□□□ 1.2
AMT-228ENST00000636023 VPS8Q8N3P4 1428 aa22.54■■□□□ 1.2
AMT-228ENST00000636023 LRRC9Q6ZRR7 1453 aa22.54■■□□□ 1.2
AMT-228ENST00000636023 WASHC2CQ9Y4E1 1318 aa22.53■■□□□ 1.2
AMT-228ENST00000636023 LOC105371045A0A1W2PR82 267 aa22.52■■□□□ 1.2
AMT-228ENST00000636023 POLR1AO95602 1720 aaPredicted RBP22.5■■□□□ 1.19
AMT-228ENST00000636023 ILDR2Q71H61 639 aa22.49■■□□□ 1.19
AMT-228ENST00000636023 MAST1Q9Y2H9 1570 aa22.48■■□□□ 1.19
AMT-228ENST00000636023 UBAP1LF5GYI3 381 aa22.48■■□□□ 1.19
AMT-228ENST00000636023 MIA2Q96PC5 1412 aa22.48■■□□□ 1.19
AMT-228ENST00000636023 KANK4Q5T7N3 995 aaPredicted RBP22.47■■□□□ 1.19
AMT-228ENST00000636023 NEURL4Q96JN8 1562 aa22.47■■□□□ 1.19
AMT-228ENST00000636023 MAP3K1Q13233 1512 aa22.47■■□□□ 1.19
AMT-228ENST00000636023 RNF17Q9BXT8 1623 aaKnown RBP22.45■■□□□ 1.19
AMT-228ENST00000636023 SPATA31D1Q6ZQQ2 1576 aa22.45■■□□□ 1.18
AMT-228ENST00000636023 NLRP1Q9C000 1473 aa22.44■■□□□ 1.18
AMT-228ENST00000636023 THEMISQ8N1K5 641 aaPredicted RBP22.43■■□□□ 1.18
AMT-228ENST00000636023 ANKLE2Q86XL3 938 aa22.43■■□□□ 1.18
AMT-228ENST00000636023 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.42■■□□□ 1.18
AMT-228ENST00000636023 EIF2AK4Q9P2K8 1649 aaKnown RBP22.41■■□□□ 1.18
AMT-228ENST00000636023 MYOM3Q5VTT5 1437 aa22.41■■□□□ 1.18
AMT-228ENST00000636023 UGGT1Q9NYU2 1555 aa22.41■■□□□ 1.18
AMT-228ENST00000636023 ZC3H13Q5T200 1668 aaKnown RBP22.41■■□□□ 1.18
AMT-228ENST00000636023 ABCC3O15438 1527 aa22.41■■□□□ 1.18
AMT-228ENST00000636023 SHANK2Q9UPX8 1470 aa22.39■■□□□ 1.17
AMT-228ENST00000636023 CPS1P31327 1500 aa22.38■■□□□ 1.17
AMT-228ENST00000636023 MED14O60244 1454 aa22.38■■□□□ 1.17
AMT-228ENST00000636023 DEPDC5O75140 1603 aa22.37■■□□□ 1.17
AMT-228ENST00000636023 MROH1Q8NDA8 1641 aa22.37■■□□□ 1.17
AMT-228ENST00000636023 CFAP65Q6ZU64 1925 aaKnown RBP22.37■■□□□ 1.17
AMT-228ENST00000636023 SOCS7O14512 581 aa22.37■■□□□ 1.17
AMT-228ENST00000636023 VWDEQ8N2E2 1590 aa22.35■■□□□ 1.17
AMT-228ENST00000636023 NPHP4O75161 1426 aaPredicted RBP22.35■■□□□ 1.17
AMT-228ENST00000636023 CEP152O94986 1710 aa22.34■■□□□ 1.17
AMT-228ENST00000636023 DUOX2Q9NRD8 1548 aa22.34■■□□□ 1.17
AMT-228ENST00000636023 ERVK-7P63135 1459 aa22.34■■□□□ 1.17
AMT-228ENST00000636023 IQGAP1P46940 1657 aa22.31■■□□□ 1.16
AMT-228ENST00000636023 TOM1O60784 492 aa22.3■■□□□ 1.16
AMT-228ENST00000636023 ABCC5O15440 1437 aa22.29■■□□□ 1.16
AMT-228ENST00000636023 CROCC2H7BZ55 1655 aa22.28■■□□□ 1.16
AMT-228ENST00000636023 PTPN23Q9H3S7 1636 aa22.27■■□□□ 1.16
AMT-228ENST00000636023 UBR1Q8IWV7 1749 aa22.27■■□□□ 1.16
AMT-228ENST00000636023 PIP4K2BP78356 416 aa22.27■■□□□ 1.16
AMT-228ENST00000636023 KIF15Q9NS87 1388 aa22.27■■□□□ 1.16
AMT-228ENST00000636023 HSPA1LP34931 641 aa22.26■■□□□ 1.15
AMT-228ENST00000636023 STRCP1A6NGW2 1772 aa22.26■■□□□ 1.15
AMT-228ENST00000636023 SCAF1Q9H7N4 1312 aaKnown RBP22.26■■□□□ 1.15
AMT-228ENST00000636023 PRDM15P57071 1507 aaPredicted RBP22.25■■□□□ 1.15
AMT-228ENST00000636023 ARHGAP31Q2M1Z3 1444 aa22.25■■□□□ 1.15
AMT-228ENST00000636023 RRP7BPQ9NSQ0 103 aa22.25■■□□□ 1.15
AMT-228ENST00000636023 ERBINQ96RT1 1412 aa22.24■■□□□ 1.15
AMT-228ENST00000636023 APLP2Q06481 763 aa22.24■■□□□ 1.15
AMT-228ENST00000636023 ALKQ9UM73 1620 aa22.22■■□□□ 1.15
AMT-228ENST00000636023 DAPK1P53355 1430 aa22.22■■□□□ 1.15
AMT-228ENST00000636023 ARHGAP23Q9P227 1491 aa22.2■■□□□ 1.14
AMT-228ENST00000636023 LRRC7Q96NW7 1537 aa22.2■■□□□ 1.14
AMT-228ENST00000636023 FGD6Q6ZV73 1430 aa22.19■■□□□ 1.14
AMT-228ENST00000636023 SCAF11Q99590 1463 aaKnown RBP22.19■■□□□ 1.14
AMT-228ENST00000636023 SLIT1O75093 1534 aa22.19■■□□□ 1.14
AMT-228ENST00000636023 LTKP29376 864 aa22.18■■□□□ 1.14
AMT-228ENST00000636023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.18■■□□□ 1.14
AMT-228ENST00000636023 TXNDC2Q86VQ3 553 aa22.17■■□□□ 1.14
AMT-228ENST00000636023 SYNMO15061 1565 aa22.17■■□□□ 1.14
AMT-228ENST00000636023 PIK3C2BO00750 1634 aa22.15■■□□□ 1.14
AMT-228ENST00000636023 KANK1Q14678 1352 aa22.15■■□□□ 1.14
AMT-228ENST00000636023 MED1Q15648 1581 aaPredicted RBP22.14■■□□□ 1.14
AMT-228ENST00000636023 CHIC2Q9UKJ5 165 aa22.14■■□□□ 1.13
AMT-228ENST00000636023 ANKRD30AQ9BXX3 1397 aa22.13■■□□□ 1.13
AMT-228ENST00000636023 LMTK2Q8IWU2 1503 aa22.12■■□□□ 1.13
AMT-228ENST00000636023 EID1Q9Y6B2 187 aa22.11■■□□□ 1.13
AMT-228ENST00000636023 KDM5AP29375 1690 aaKnown RBP22.1■■□□□ 1.13
AMT-228ENST00000636023 TMEM2Q9UHN6 1383 aa22.1■■□□□ 1.13
AMT-228ENST00000636023 IDI1Q13907 227 aa22.09■■□□□ 1.13
AMT-228ENST00000636023 XIRP1Q702N8 1843 aaKnown RBP22.09■■□□□ 1.13
AMT-228ENST00000636023 STAG3Q9UJ98 1225 aa22.07■■□□□ 1.12
AMT-228ENST00000636023 ADGRL2O95490 1459 aa22.06■■□□□ 1.12
AMT-228ENST00000636023 EFCAB6Q5THR3 1501 aa22.06■■□□□ 1.12
AMT-228ENST00000636023 NOS1P29475 1434 aa22.05■■□□□ 1.12
AMT-228ENST00000636023 SENP3Q9H4L4 574 aaPredicted RBP22.01■■□□□ 1.11
AMT-228ENST00000636023 TET3O43151 1660 aa22.01■■□□□ 1.11
AMT-228ENST00000636023 FAM50AQ14320 339 aaKnown RBP21.99■■□□□ 1.11
AMT-228ENST00000636023 SLC52A1Q9NWF4 448 aa21.99■■□□□ 1.11
AMT-228ENST00000636023 ADGRB3O60242 1522 aa21.99■■□□□ 1.11
AMT-228ENST00000636023 KCNA6P17658 529 aa21.98■■□□□ 1.11
AMT-228ENST00000636023 ANKRD50Q9ULJ7 1429 aa21.98■■□□□ 1.11
AMT-228ENST00000636023 PHF23Q9BUL5 403 aaPredicted RBP21.97■■□□□ 1.11
AMT-228ENST00000636023 RPRD2Q5VT52 1461 aaKnown RBP21.96■■□□□ 1.11
AMT-228ENST00000636023 SLC26A8Q96RN1 970 aa21.96■■□□□ 1.11
AMT-228ENST00000636023 TMEM94Q12767 1356 aa21.95■■□□□ 1.1
AMT-228ENST00000636023 FAM135BQ49AJ0 1406 aa21.94■■□□□ 1.1
AMT-228ENST00000636023 MYO5BQ9ULV0 1848 aa21.94■■□□□ 1.1
AMT-228ENST00000636023 PROSER2Q86WR7 435 aaPredicted RBP21.92■■□□□ 1.1
AMT-228ENST00000636023 NWD1Q149M9 1564 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms