RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 TONSLQ96HA7 1378 aa14.48□□□□□ -0.09
CACNA1A-216ENST00000635742 PKD2Q13563 968 aa14.48□□□□□ -0.09
CACNA1A-216ENST00000635742 TIMELESSQ9UNS1 1208 aa14.47□□□□□ -0.09
CACNA1A-216ENST00000635742 RPRD2Q5VT52 1461 aaKnown RBP14.47□□□□□ -0.09
CACNA1A-216ENST00000635742 MYT1LQ9UL68 1186 aa14.47□□□□□ -0.09
CACNA1A-216ENST00000635742 MROH1Q8NDA8 1641 aa14.45□□□□□ -0.1
CACNA1A-216ENST00000635742 RAPGEF3O95398 923 aa14.45□□□□□ -0.1
CACNA1A-216ENST00000635742 TEX14Q8IWB6 1497 aa14.45□□□□□ -0.1
CACNA1A-216ENST00000635742 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.45□□□□□ -0.1
CACNA1A-216ENST00000635742 DHX29Q7Z478 1369 aaKnown RBP14.45□□□□□ -0.1
CACNA1A-216ENST00000635742 DIP2CQ9Y2E4 1556 aa14.44□□□□□ -0.1
CACNA1A-216ENST00000635742 A2MP01023 1474 aa14.44□□□□□ -0.1
CACNA1A-216ENST00000635742 PRDM15P57071 1507 aaPredicted RBP14.43□□□□□ -0.1
CACNA1A-216ENST00000635742 VWDEQ8N2E2 1590 aa14.43□□□□□ -0.1
CACNA1A-216ENST00000635742 RNF17Q9BXT8 1623 aaKnown RBP14.42□□□□□ -0.1
CACNA1A-216ENST00000635742 ZMYM4Q5VZL5 1548 aa14.42□□□□□ -0.1
CACNA1A-216ENST00000635742 PPP1R15AO75807 674 aaPredicted RBP14.42□□□□□ -0.1
CACNA1A-216ENST00000635742 BCORL1Q5H9F3 1711 aa14.41□□□□□ -0.1
CACNA1A-216ENST00000635742 ZNF316A6NFI3 1004 aaPredicted RBP14.41□□□□□ -0.1
CACNA1A-216ENST00000635742 E9PCH4 1651 aa14.4□□□□□ -0.1
CACNA1A-216ENST00000635742 TET3O43151 1660 aa14.4□□□□□ -0.1
CACNA1A-216ENST00000635742 YEATS2Q9ULM3 1422 aa14.39□□□□□ -0.11
CACNA1A-216ENST00000635742 KIF3BO15066 747 aa14.39□□□□□ -0.11
CACNA1A-216ENST00000635742 PLA2R1Q13018 1463 aa14.38□□□□□ -0.11
CACNA1A-216ENST00000635742 CEP152O94986 1710 aa14.37□□□□□ -0.11
CACNA1A-216ENST00000635742 L3MBTL2Q969R5 705 aa14.37□□□□□ -0.11
CACNA1A-216ENST00000635742 COL17A1Q9UMD9 1497 aaPredicted RBP14.35□□□□□ -0.11
CACNA1A-216ENST00000635742 KANK1Q14678 1352 aa14.35□□□□□ -0.11
CACNA1A-216ENST00000635742 SPHKAPQ2M3C7 1700 aa14.34□□□□□ -0.11
CACNA1A-216ENST00000635742 EFCAB6Q5THR3 1501 aa14.34□□□□□ -0.11
CACNA1A-216ENST00000635742 ATP10AO60312 1499 aa14.34□□□□□ -0.11
CACNA1A-216ENST00000635742 LMTK2Q8IWU2 1503 aa14.33□□□□□ -0.12
CACNA1A-216ENST00000635742 CCDC144AA2RUR9 1427 aa14.32□□□□□ -0.12
CACNA1A-216ENST00000635742 TRPM2O94759 1503 aa14.31□□□□□ -0.12
CACNA1A-216ENST00000635742 ARHGEF40Q8TER5 1519 aa14.31□□□□□ -0.12
CACNA1A-216ENST00000635742 ABCC3O15438 1527 aa14.3□□□□□ -0.12
CACNA1A-216ENST00000635742 SIGLEC1Q9BZZ2 1709 aa14.3□□□□□ -0.12
CACNA1A-216ENST00000635742 REREQ9P2R6 1566 aa14.3□□□□□ -0.12
CACNA1A-216ENST00000635742 CLTCL1P53675 1640 aa14.29□□□□□ -0.12
CACNA1A-216ENST00000635742 PTPRTO14522 1441 aa14.29□□□□□ -0.12
CACNA1A-216ENST00000635742 CAMSAP1Q5T5Y3 1602 aa14.29□□□□□ -0.12
CACNA1A-216ENST00000635742 NBPF8Q3BBV2 869 aa14.28□□□□□ -0.12
CACNA1A-216ENST00000635742 DNAJC5Q9H3Z4 198 aa14.28□□□□□ -0.12
CACNA1A-216ENST00000635742 GGT6Q6P531 493 aa14.27□□□□□ -0.12
CACNA1A-216ENST00000635742 ZC3H13Q5T200 1668 aaKnown RBP14.27□□□□□ -0.12
CACNA1A-216ENST00000635742 DIEXFQ68CQ4 756 aaKnown RBP14.25□□□□□ -0.13
CACNA1A-216ENST00000635742 AGLP35573 1532 aa14.25□□□□□ -0.13
CACNA1A-216ENST00000635742 NPATQ14207 1427 aa14.25□□□□□ -0.13
CACNA1A-216ENST00000635742 UGGT1Q9NYU2 1555 aa14.25□□□□□ -0.13
CACNA1A-216ENST00000635742 UHRF1BP1Q6BDS2 1440 aa14.24□□□□□ -0.13
CACNA1A-216ENST00000635742 SPATA31E1Q6ZUB1 1445 aa14.23□□□□□ -0.13
CACNA1A-216ENST00000635742 HIRIP3Q9BW71 556 aaPredicted RBP14.21□□□□□ -0.13
CACNA1A-216ENST00000635742 WASHC2CQ9Y4E1 1318 aa14.21□□□□□ -0.13
CACNA1A-216ENST00000635742 CFAP65Q6ZU64 1925 aaKnown RBP14.21□□□□□ -0.13
CACNA1A-216ENST00000635742 MROH2AA6NES4 1674 aa14.21□□□□□ -0.14
CACNA1A-216ENST00000635742 ZNF326Q5BKZ1 582 aaKnown RBP14.21□□□□□ -0.14
CACNA1A-216ENST00000635742 RALGAPBQ86X10 1494 aa14.2□□□□□ -0.14
CACNA1A-216ENST00000635742 TRHP20396 242 aaPredicted RBP14.2□□□□□ -0.14
CACNA1A-216ENST00000635742 MYT1Q01538 1121 aa14.2□□□□□ -0.14
CACNA1A-216ENST00000635742 DCAF11Q8TEB1 546 aa14.2□□□□□ -0.14
CACNA1A-216ENST00000635742 RGL3Q3MIN7 710 aa14.19□□□□□ -0.14
CACNA1A-216ENST00000635742 KIF1BO60333 1816 aa14.19□□□□□ -0.14
CACNA1A-216ENST00000635742 TRPM1Q7Z4N2 1603 aa14.19□□□□□ -0.14
CACNA1A-216ENST00000635742 NEURL4Q96JN8 1562 aa14.19□□□□□ -0.14
CACNA1A-216ENST00000635742 KDM2AQ9Y2K7 1162 aa14.19□□□□□ -0.14
CACNA1A-216ENST00000635742 PRAG1Q86YV5 1406 aa14.18□□□□□ -0.14
CACNA1A-216ENST00000635742 SYNMO15061 1565 aa14.18□□□□□ -0.14
CACNA1A-216ENST00000635742 ARHGAP31Q2M1Z3 1444 aa14.18□□□□□ -0.14
CACNA1A-216ENST00000635742 CLTCQ00610 1675 aaKnown RBP14.17□□□□□ -0.14
CACNA1A-216ENST00000635742 NOS1P29475 1434 aa14.17□□□□□ -0.14
CACNA1A-216ENST00000635742 CNTLNQ9NXG0 1405 aa14.17□□□□□ -0.14
CACNA1A-216ENST00000635742 HSPA5P11021 654 aaKnown RBP14.17□□□□□ -0.14
CACNA1A-216ENST00000635742 PREX1Q8TCU6 1659 aa14.16□□□□□ -0.14
CACNA1A-216ENST00000635742 PIK3C2BO00750 1634 aa14.16□□□□□ -0.14
CACNA1A-216ENST00000635742 ADGRB3O60242 1522 aa14.16□□□□□ -0.14
CACNA1A-216ENST00000635742 MADDQ8WXG6 1647 aa14.16□□□□□ -0.14
CACNA1A-216ENST00000635742 IFT172Q9UG01 1749 aa14.15□□□□□ -0.14
CACNA1A-216ENST00000635742 EIF4G2P78344 907 aaKnown RBP eCLIP14.14□□□□□ -0.15
CACNA1A-216ENST00000635742 MLECQ14165 292 aa14.11□□□□□ -0.15
CACNA1A-216ENST00000635742 USP47Q96K76 1375 aa14.11□□□□□ -0.15
CACNA1A-216ENST00000635742 LAMC1P11047 1609 aa14.1□□□□□ -0.15
CACNA1A-216ENST00000635742 ERVK-7P63135 1459 aa14.1□□□□□ -0.15
CACNA1A-216ENST00000635742 POLR1AO95602 1720 aaPredicted RBP14.1□□□□□ -0.15
CACNA1A-216ENST00000635742 MYOM2P54296 1465 aa14.1□□□□□ -0.15
CACNA1A-216ENST00000635742 ROCK2O75116 1388 aaKnown RBP14.1□□□□□ -0.15
CACNA1A-216ENST00000635742 PPLO60437 1756 aa14.09□□□□□ -0.15
CACNA1A-216ENST00000635742 PPP6R1Q9UPN7 881 aa14.09□□□□□ -0.15
CACNA1A-216ENST00000635742 GPRASP1Q5JY77 1395 aa14.08□□□□□ -0.16
CACNA1A-216ENST00000635742 CARD11Q9BXL7 1154 aa14.07□□□□□ -0.16
CACNA1A-216ENST00000635742 MYO5BQ9ULV0 1848 aa14.07□□□□□ -0.16
CACNA1A-216ENST00000635742 SPATA31D1Q6ZQQ2 1576 aa14.07□□□□□ -0.16
CACNA1A-216ENST00000635742 DDX10Q13206 875 aaKnown RBP14.06□□□□□ -0.16
CACNA1A-216ENST00000635742 NBPF1Q3BBV0 1214 aa14.06□□□□□ -0.16
CACNA1A-216ENST00000635742 KIAA1210Q9ULL0 1709 aa14.06□□□□□ -0.16
CACNA1A-216ENST00000635742 CHGAP10645 457 aaKnown RBP14.05□□□□□ -0.16
CACNA1A-216ENST00000635742 FBXO31Q5XUX0 539 aaPredicted RBP14.05□□□□□ -0.16
CACNA1A-216ENST00000635742 MIER1Q8N108 512 aa14.05□□□□□ -0.16
CACNA1A-216ENST00000635742 ARID4BQ4LE39 1312 aaPredicted RBP14.05□□□□□ -0.16
CACNA1A-216ENST00000635742 WASHC2AQ641Q2 1341 aa14.05□□□□□ -0.16
CACNA1A-216ENST00000635742 NRXN1Q9ULB1 1477 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms