RNA–Protein interactions for RNA: ENST00000635702.1

LINC01709-202, Transcript of long intergenic non-protein coding RNA 1709, humanhuman

TSL 5 BASIC

Gene LINC01709, Length 1,204 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01709-202ENST00000635702 BCAMP50895 628 aa13.52□□□□□ -0.25
LINC01709-202ENST00000635702 LAPTM4BQ86VI4 370 aa13.51□□□□□ -0.25
LINC01709-202ENST00000635702 SOWAHBA6NEL2 793 aa13.5□□□□□ -0.25
LINC01709-202ENST00000635702 PHF14O94880 888 aa13.5□□□□□ -0.25
LINC01709-202ENST00000635702 TYW1BQ6NUM6 668 aa13.5□□□□□ -0.25
LINC01709-202ENST00000635702 FBXW7Q969H0 707 aa13.5□□□□□ -0.25
LINC01709-202ENST00000635702 ONECUT3O60422 494 aaPredicted RBP13.46□□□□□ -0.25
LINC01709-202ENST00000635702 ZFRQ96KR1 1074 aaKnown RBP13.46□□□□□ -0.25
LINC01709-202ENST00000635702 KIAA1468Q9P260 1216 aa13.46□□□□□ -0.25
LINC01709-202ENST00000635702 NYAP1Q6ZVC0 841 aa13.45□□□□□ -0.26
LINC01709-202ENST00000635702 CADPS2Q86UW7 1296 aa13.45□□□□□ -0.26
LINC01709-202ENST00000635702 WBP1LQ9NX94 342 aa13.43□□□□□ -0.26
LINC01709-202ENST00000635702 C6orf132Q5T0Z8 1188 aa13.41□□□□□ -0.26
LINC01709-202ENST00000635702 CAMK2BQ13554 666 aa13.4□□□□□ -0.26
LINC01709-202ENST00000635702 EPAS1Q99814 870 aa13.39□□□□□ -0.27
LINC01709-202ENST00000635702 SEPT9Q9UHD8 586 aaPredicted RBP13.39□□□□□ -0.27
LINC01709-202ENST00000635702 KCNC4Q03721 635 aa13.38□□□□□ -0.27
LINC01709-202ENST00000635702 TRIM6-TRIM34B2RNG4 842 aa13.37□□□□□ -0.27
LINC01709-202ENST00000635702 FAM98CQ17RN3 349 aaKnown RBP13.35□□□□□ -0.27
LINC01709-202ENST00000635702 Q6ZNB5 142 aa13.33□□□□□ -0.28
LINC01709-202ENST00000635702 DPYSL4O14531 572 aa13.32□□□□□ -0.28
LINC01709-202ENST00000635702 TSR3Q9UJK0 312 aaKnown RBP13.32□□□□□ -0.28
LINC01709-202ENST00000635702 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.3□□□□□ -0.28
LINC01709-202ENST00000635702 HPS5Q9UPZ3 1129 aa13.29□□□□□ -0.28
LINC01709-202ENST00000635702 LCE2BO14633 110 aa13.28□□□□□ -0.28
LINC01709-202ENST00000635702 RBM33Q96EV2 1170 aaKnown RBP13.27□□□□□ -0.29
LINC01709-202ENST00000635702 LRCH3Q96II8 777 aa13.27□□□□□ -0.29
LINC01709-202ENST00000635702 TSKSQ9UJT2 592 aa13.26□□□□□ -0.29
LINC01709-202ENST00000635702 DDX12PQ92771 950 aa13.25□□□□□ -0.29
LINC01709-202ENST00000635702 EN1Q05925 392 aaPredicted RBP13.22□□□□□ -0.29
LINC01709-202ENST00000635702 LAPTM4AQ15012 233 aa13.21□□□□□ -0.29
LINC01709-202ENST00000635702 TSR1Q2NL82 804 aaKnown RBP13.21□□□□□ -0.29
LINC01709-202ENST00000635702 TJAP1Q5JTD0 557 aa13.2□□□□□ -0.3
LINC01709-202ENST00000635702 PACS2Q86VP3 889 aa13.18□□□□□ -0.3
LINC01709-202ENST00000635702 NBR1Q14596 966 aa13.16□□□□□ -0.3
LINC01709-202ENST00000635702 PDIA6Q15084 440 aa13.16□□□□□ -0.3
LINC01709-202ENST00000635702 FAM198AQ9UFP1 575 aa13.16□□□□□ -0.3
LINC01709-202ENST00000635702 GFRA3O60609 400 aa13.15□□□□□ -0.3
LINC01709-202ENST00000635702 PPP4CP60510 307 aa13.15□□□□□ -0.3
LINC01709-202ENST00000635702 MAP3K7O43318 606 aa13.14□□□□□ -0.31
LINC01709-202ENST00000635702 C3orf80F5H4A9 247 aa13.13□□□□□ -0.31
LINC01709-202ENST00000635702 TRAF7Q6Q0C0 670 aa13.13□□□□□ -0.31
LINC01709-202ENST00000635702 SAMD7Q7Z3H4 446 aa13.13□□□□□ -0.31
LINC01709-202ENST00000635702 CDCA7LQ96GN5 454 aa13.12□□□□□ -0.31
LINC01709-202ENST00000635702 SMAPO00193 183 aa13.11□□□□□ -0.31
LINC01709-202ENST00000635702 DCAF8L2P0C7V8 631 aa13.11□□□□□ -0.31
LINC01709-202ENST00000635702 PRIM1P49642 420 aaKnown RBP13.11□□□□□ -0.31
LINC01709-202ENST00000635702 PRSS12P56730 875 aa13.1□□□□□ -0.31
LINC01709-202ENST00000635702 PRKD2Q9BZL6 878 aa13.1□□□□□ -0.31
LINC01709-202ENST00000635702 MTRQ99707 1265 aa13.09□□□□□ -0.31
LINC01709-202ENST00000635702 SPDYE16A6NNV3 312 aaPredicted RBP13.07□□□□□ -0.32
LINC01709-202ENST00000635702 PPP1R18Q6NYC8 613 aa13.07□□□□□ -0.32
LINC01709-202ENST00000635702 IL21Q9HBE4 155 aa13.07□□□□□ -0.32
LINC01709-202ENST00000635702 NRG2O14511 850 aaPredicted RBP13.06□□□□□ -0.32
LINC01709-202ENST00000635702 V9GY48 417 aaPredicted RBP13.06□□□□□ -0.32
LINC01709-202ENST00000635702 CERKQ8TCT0 537 aa13.05□□□□□ -0.32
LINC01709-202ENST00000635702 TATDN2Q93075 761 aa13.05□□□□□ -0.32
LINC01709-202ENST00000635702 ZNF516Q92618 1163 aa13.04□□□□□ -0.32
LINC01709-202ENST00000635702 NBPF26B4DH59 902 aa13.01□□□□□ -0.33
LINC01709-202ENST00000635702 PNMA3Q9UL41 463 aa13.01□□□□□ -0.33
LINC01709-202ENST00000635702 APLP1P51693 650 aa13□□□□□ -0.33
LINC01709-202ENST00000635702 EIF4ENIF1Q9NRA8 985 aaKnown RBP13□□□□□ -0.33
LINC01709-202ENST00000635702 ARIH1Q9Y4X5 557 aaPredicted RBP12.99□□□□□ -0.33
LINC01709-202ENST00000635702 CDHR5Q9HBB8 845 aa12.97□□□□□ -0.33
LINC01709-202ENST00000635702 NKX2-3Q8TAU0 364 aa12.96□□□□□ -0.33
LINC01709-202ENST00000635702 RBM27Q9P2N5 1060 aaKnown RBP12.96□□□□□ -0.33
LINC01709-202ENST00000635702 NUDT18Q6ZVK8 323 aa12.95□□□□□ -0.34
LINC01709-202ENST00000635702 GRXCR2A6NFK2 248 aa12.94□□□□□ -0.34
LINC01709-202ENST00000635702 OSBPP22059 807 aa12.94□□□□□ -0.34
LINC01709-202ENST00000635702 TTC13Q8NBP0 860 aa12.93□□□□□ -0.34
LINC01709-202ENST00000635702 E2F4Q16254 413 aa12.92□□□□□ -0.34
LINC01709-202ENST00000635702 BBXQ8WY36 941 aaPredicted RBP12.92□□□□□ -0.34
LINC01709-202ENST00000635702 PDZRN3Q9UPQ7 1066 aa12.9□□□□□ -0.34
LINC01709-202ENST00000635702 RNF40O75150 1001 aa12.89□□□□□ -0.35
LINC01709-202ENST00000635702 HDGFP51858 240 aaKnown RBP12.88□□□□□ -0.35
LINC01709-202ENST00000635702 NPDC1Q9NQX5 325 aaPredicted RBP12.88□□□□□ -0.35
LINC01709-202ENST00000635702 SWT1Q5T5J6 900 aaKnown RBP12.87□□□□□ -0.35
LINC01709-202ENST00000635702 COPS2P61201 443 aa12.85□□□□□ -0.35
LINC01709-202ENST00000635702 ZNF787Q6DD87 383 aa12.85□□□□□ -0.35
LINC01709-202ENST00000635702 NECTIN2Q92692 538 aa12.85□□□□□ -0.35
LINC01709-202ENST00000635702 TMUB1Q9BVT8 246 aa12.85□□□□□ -0.35
LINC01709-202ENST00000635702 GGCXP38435 758 aa12.83□□□□□ -0.36
LINC01709-202ENST00000635702 PADI6Q6TGC4 694 aa12.83□□□□□ -0.36
LINC01709-202ENST00000635702 TRIM67Q6ZTA4 783 aa12.83□□□□□ -0.36
LINC01709-202ENST00000635702 SLF2Q8IX21 1173 aa12.83□□□□□ -0.36
LINC01709-202ENST00000635702 ZPR1O75312 459 aa12.82□□□□□ -0.36
LINC01709-202ENST00000635702 EMID1Q96A84 441 aaPredicted RBP12.81□□□□□ -0.36
LINC01709-202ENST00000635702 EYA1Q99502 592 aa12.8□□□□□ -0.36
LINC01709-202ENST00000635702 ZNF775Q96BV0 537 aaPredicted RBP12.79□□□□□ -0.36
LINC01709-202ENST00000635702 SPRYD3Q8NCJ5 442 aa12.78□□□□□ -0.36
LINC01709-202ENST00000635702 RNF223E7ERA6 249 aa12.75□□□□□ -0.37
LINC01709-202ENST00000635702 PCDHB3Q9Y5E6 796 aa12.73□□□□□ -0.37
LINC01709-202ENST00000635702 SLC19A1P41440 591 aa12.72□□□□□ -0.37
LINC01709-202ENST00000635702 BLOC1S3Q6QNY0 202 aa12.72□□□□□ -0.37
LINC01709-202ENST00000635702 WDR70Q9NW82 654 aa12.72□□□□□ -0.37
LINC01709-202ENST00000635702 PRR14Q9BWN1 585 aa12.71□□□□□ -0.37
LINC01709-202ENST00000635702 SPRYD7Q5W111 196 aa12.69□□□□□ -0.38
LINC01709-202ENST00000635702 SLC4A3P48751 1232 aa12.68□□□□□ -0.38
LINC01709-202ENST00000635702 PRR20EP86478 221 aa12.68□□□□□ -0.38
LINC01709-202ENST00000635702 PRR20CP86479 221 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms