RNA–Protein interactions for RNA: ENST00000635647.1

PTBP1-221, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5 BASIC

Gene PTBP1, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-221ENST00000635647 RALBP1Q15311 655 aa19.14■□□□□ 0.66
PTBP1-221ENST00000635647 PZPP20742 1482 aa19.14■□□□□ 0.65
PTBP1-221ENST00000635647 KTN1Q86UP2 1357 aaKnown RBP19.13■□□□□ 0.65
PTBP1-221ENST00000635647 KIAA0556O60303 1618 aa19.13■□□□□ 0.65
PTBP1-221ENST00000635647 RAPGEF6Q8TEU7 1601 aa19.13■□□□□ 0.65
PTBP1-221ENST00000635647 CDCA7LQ96GN5 454 aa19.12■□□□□ 0.65
PTBP1-221ENST00000635647 PANK3Q9H999 370 aa19.12■□□□□ 0.65
PTBP1-221ENST00000635647 SPATA31E1Q6ZUB1 1445 aa19.11■□□□□ 0.65
PTBP1-221ENST00000635647 NLRP13Q86W25 1043 aa19.11■□□□□ 0.65
PTBP1-221ENST00000635647 DHX29Q7Z478 1369 aaKnown RBP19.1■□□□□ 0.65
PTBP1-221ENST00000635647 DNMT1P26358 1616 aaKnown RBP19.1■□□□□ 0.65
PTBP1-221ENST00000635647 PTPRGP23470 1445 aa19.1■□□□□ 0.65
PTBP1-221ENST00000635647 CCDC144AA2RUR9 1427 aa19.1■□□□□ 0.65
PTBP1-221ENST00000635647 NEFMP07197 916 aa19.09■□□□□ 0.65
PTBP1-221ENST00000635647 SMG6Q86US8 1419 aaKnown RBP19.08■□□□□ 0.65
PTBP1-221ENST00000635647 RRP1P56182 461 aaKnown RBP19.07■□□□□ 0.64
PTBP1-221ENST00000635647 TMF1P82094 1093 aa19.07■□□□□ 0.64
PTBP1-221ENST00000635647 KNSTRNQ9Y448 316 aa19.07■□□□□ 0.64
PTBP1-221ENST00000635647 RGS3P49796 1198 aa19.06■□□□□ 0.64
PTBP1-221ENST00000635647 SAFB2Q14151 953 aaKnown RBP eCLIP19.05■□□□□ 0.64
PTBP1-221ENST00000635647 PLPPR3Q6T4P5 718 aa19.05■□□□□ 0.64
PTBP1-221ENST00000635647 KIF14Q15058 1648 aa19.04■□□□□ 0.64
PTBP1-221ENST00000635647 NUTM2DQ5VT03 806 aaPredicted RBP19.04■□□□□ 0.64
PTBP1-221ENST00000635647 ARID4BQ4LE39 1312 aaPredicted RBP19.04■□□□□ 0.64
PTBP1-221ENST00000635647 CCDC146Q8IYE0 955 aa19.03■□□□□ 0.64
PTBP1-221ENST00000635647 MAGI1Q96QZ7 1491 aaPredicted RBP19.02■□□□□ 0.64
PTBP1-221ENST00000635647 SKAP1Q86WV1 359 aa19.02■□□□□ 0.64
PTBP1-221ENST00000635647 ARXQ96QS3 562 aa19.01■□□□□ 0.63
PTBP1-221ENST00000635647 SYNJ2O15056 1496 aa19.01■□□□□ 0.63
PTBP1-221ENST00000635647 IPO9Q96P70 1041 aaKnown RBP19■□□□□ 0.63
PTBP1-221ENST00000635647 BRD4O60885 1362 aaPredicted RBP18.99■□□□□ 0.63
PTBP1-221ENST00000635647 ATP10BO94823 1461 aa18.99■□□□□ 0.63
PTBP1-221ENST00000635647 EIF4G3O43432 1585 aaKnown RBP18.98■□□□□ 0.63
PTBP1-221ENST00000635647 CRBNQ96SW2 442 aa18.96■□□□□ 0.63
PTBP1-221ENST00000635647 RSPH4AQ5TD94 716 aa18.96■□□□□ 0.63
PTBP1-221ENST00000635647 FRAT1Q92837 279 aaPredicted RBP18.95■□□□□ 0.62
PTBP1-221ENST00000635647 GGT6Q6P531 493 aa18.94■□□□□ 0.62
PTBP1-221ENST00000635647 ADAMTS8Q9UP79 889 aa18.94■□□□□ 0.62
PTBP1-221ENST00000635647 PDE4AP27815 886 aa18.93■□□□□ 0.62
PTBP1-221ENST00000635647 KIF3BO15066 747 aa18.92■□□□□ 0.62
PTBP1-221ENST00000635647 EFCAB2Q5VUJ9 269 aa18.92■□□□□ 0.62
PTBP1-221ENST00000635647 BCORL1Q5H9F3 1711 aa18.91■□□□□ 0.62
PTBP1-221ENST00000635647 CEP170Q5SW79 1584 aa18.91■□□□□ 0.62
PTBP1-221ENST00000635647 RALGAPBQ86X10 1494 aa18.91■□□□□ 0.62
PTBP1-221ENST00000635647 PDE3BQ13370 1112 aa18.91■□□□□ 0.62
PTBP1-221ENST00000635647 ARHGAP5Q13017 1502 aa18.91■□□□□ 0.62
PTBP1-221ENST00000635647 SLC4A3P48751 1232 aa18.9■□□□□ 0.62
PTBP1-221ENST00000635647 AFAP1Q8N556 730 aa18.9■□□□□ 0.62
PTBP1-221ENST00000635647 ITSN2Q9NZM3 1697 aa18.9■□□□□ 0.62
PTBP1-221ENST00000635647 TCERG1O14776 1098 aaKnown RBP18.9■□□□□ 0.62
PTBP1-221ENST00000635647 DISP3Q9P2K9 1392 aa18.89■□□□□ 0.61
PTBP1-221ENST00000635647 PPM1GO15355 546 aaPredicted RBP18.89■□□□□ 0.61
PTBP1-221ENST00000635647 NPM1P06748 294 aaKnown RBP eCLIP18.88■□□□□ 0.61
PTBP1-221ENST00000635647 ADGRL2O95490 1459 aa18.87■□□□□ 0.61
PTBP1-221ENST00000635647 RRP7AQ9Y3A4 280 aaKnown RBP18.87■□□□□ 0.61
PTBP1-221ENST00000635647 CCDC141Q6ZP82 1450 aa18.86■□□□□ 0.61
PTBP1-221ENST00000635647 SPAG9O60271 1321 aaKnown RBP18.86■□□□□ 0.61
PTBP1-221ENST00000635647 STAG3Q9UJ98 1225 aa18.86■□□□□ 0.61
PTBP1-221ENST00000635647 C20orf194Q5TEA3 1177 aa18.85■□□□□ 0.61
PTBP1-221ENST00000635647 STK26Q9P289 416 aa18.85■□□□□ 0.61
PTBP1-221ENST00000635647 BRPF3Q9ULD4 1205 aa18.85■□□□□ 0.61
PTBP1-221ENST00000635647 PLEKHH2Q8IVE3 1493 aa18.85■□□□□ 0.61
PTBP1-221ENST00000635647 MBD5Q9P267 1494 aa18.84■□□□□ 0.61
PTBP1-221ENST00000635647 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.84■□□□□ 0.61
PTBP1-221ENST00000635647 CDCA8Q53HL2 280 aa18.84■□□□□ 0.61
PTBP1-221ENST00000635647 PER1O15534 1290 aaPredicted RBP18.83■□□□□ 0.61
PTBP1-221ENST00000635647 KDM5CP41229 1560 aa18.83■□□□□ 0.61
PTBP1-221ENST00000635647 UHRF1BP1Q6BDS2 1440 aa18.82■□□□□ 0.6
PTBP1-221ENST00000635647 GOLGA2Q08379 1002 aa18.82■□□□□ 0.6
PTBP1-221ENST00000635647 TESK2Q96S53 571 aa18.82■□□□□ 0.6
PTBP1-221ENST00000635647 TRAK1Q9UPV9 953 aa18.82■□□□□ 0.6
PTBP1-221ENST00000635647 ERBINQ96RT1 1412 aa18.82■□□□□ 0.6
PTBP1-221ENST00000635647 RNF123Q5XPI4 1314 aa18.81■□□□□ 0.6
PTBP1-221ENST00000635647 BCL2L13Q9BXK5 485 aa18.81■□□□□ 0.6
PTBP1-221ENST00000635647 PRAG1Q86YV5 1406 aa18.81■□□□□ 0.6
PTBP1-221ENST00000635647 FAM135AQ9P2D6 1515 aa18.81■□□□□ 0.6
PTBP1-221ENST00000635647 APAF1O14727 1248 aa18.81■□□□□ 0.6
PTBP1-221ENST00000635647 PPP2R1AP30153 589 aa18.81■□□□□ 0.6
PTBP1-221ENST00000635647 ADGBQ8N7X0 1667 aa18.8■□□□□ 0.6
PTBP1-221ENST00000635647 LRPPRCP42704 1394 aaKnown RBP18.79■□□□□ 0.6
PTBP1-221ENST00000635647 CLUAP1Q96AJ1 413 aa18.79■□□□□ 0.6
PTBP1-221ENST00000635647 PLEKHG5O94827 1062 aa18.79■□□□□ 0.6
PTBP1-221ENST00000635647 NUP160Q12769 1436 aa18.79■□□□□ 0.6
PTBP1-221ENST00000635647 ABCC10Q5T3U5 1492 aa18.78■□□□□ 0.6
PTBP1-221ENST00000635647 U2SURPO15042 1029 aaKnown RBP18.78■□□□□ 0.6
PTBP1-221ENST00000635647 SYCP2Q9BX26 1530 aa18.78■□□□□ 0.6
PTBP1-221ENST00000635647 PARD3Q8TEW0 1356 aa18.77■□□□□ 0.6
PTBP1-221ENST00000635647 CFAP70Q5T0N1 1121 aa18.77■□□□□ 0.6
PTBP1-221ENST00000635647 BACH2Q9BYV9 841 aa18.75■□□□□ 0.59
PTBP1-221ENST00000635647 SPRYD3Q8NCJ5 442 aa18.74■□□□□ 0.59
PTBP1-221ENST00000635647 ARHGEF12Q9NZN5 1544 aa18.74■□□□□ 0.59
PTBP1-221ENST00000635647 SHANK2Q9UPX8 1470 aa18.73■□□□□ 0.59
PTBP1-221ENST00000635647 MLECQ14165 292 aa18.72■□□□□ 0.59
PTBP1-221ENST00000635647 MORC1Q86VD1 984 aa18.72■□□□□ 0.59
PTBP1-221ENST00000635647 A2MP01023 1474 aa18.72■□□□□ 0.59
PTBP1-221ENST00000635647 TMEM132EQ6IEE7 984 aa18.71■□□□□ 0.59
PTBP1-221ENST00000635647 CDC42BPAQ5VT25 1732 aa18.71■□□□□ 0.59
PTBP1-221ENST00000635647 WASHC2CQ9Y4E1 1318 aa18.71■□□□□ 0.58
PTBP1-221ENST00000635647 KANK1Q14678 1352 aa18.7■□□□□ 0.58
PTBP1-221ENST00000635647 DDRGK1Q96HY6 314 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms