RNA–Protein interactions for RNA: ENST00000635590.1

SMARCA2-243, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 1,843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-243ENST00000635590 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.63□□□□□ -0.55
SMARCA2-243ENST00000635590 POLR3EQ9NVU0 708 aa11.63□□□□□ -0.55
SMARCA2-243ENST00000635590 CHADLQ6NUI6 762 aa11.62□□□□□ -0.55
SMARCA2-243ENST00000635590 MYT1Q01538 1121 aa11.61□□□□□ -0.55
SMARCA2-243ENST00000635590 CCDC27Q2M243 656 aa11.61□□□□□ -0.55
SMARCA2-243ENST00000635590 BANK1Q8NDB2 785 aa11.6□□□□□ -0.55
SMARCA2-243ENST00000635590 CLCN1P35523 988 aa11.6□□□□□ -0.55
SMARCA2-243ENST00000635590 FARP1Q9Y4F1 1045 aaPredicted RBP11.6□□□□□ -0.55
SMARCA2-243ENST00000635590 SSTR3P32745 418 aaPredicted RBP11.59□□□□□ -0.55
SMARCA2-243ENST00000635590 PTGDRQ13258 359 aa11.58□□□□□ -0.56
SMARCA2-243ENST00000635590 KIF12Q96FN5 646 aa11.58□□□□□ -0.56
SMARCA2-243ENST00000635590 BEGAINQ9BUH8 593 aa11.58□□□□□ -0.56
SMARCA2-243ENST00000635590 GPCPD1Q9NPB8 672 aa11.58□□□□□ -0.56
SMARCA2-243ENST00000635590 GLMNQ92990 594 aa11.58□□□□□ -0.56
SMARCA2-243ENST00000635590 GDPD2Q9HCC8 539 aa11.58□□□□□ -0.56
SMARCA2-243ENST00000635590 USTQ9Y2C2 406 aa11.58□□□□□ -0.56
SMARCA2-243ENST00000635590 RBM42Q9BTD8 480 aaKnown RBP11.57□□□□□ -0.56
SMARCA2-243ENST00000635590 PITPNM1O00562 1244 aa11.56□□□□□ -0.56
SMARCA2-243ENST00000635590 RFC5P40937 340 aa11.56□□□□□ -0.56
SMARCA2-243ENST00000635590 MDM2Q00987 491 aaPredicted RBP11.56□□□□□ -0.56
SMARCA2-243ENST00000635590 PBXIP1Q96AQ6 731 aa11.56□□□□□ -0.56
SMARCA2-243ENST00000635590 POM121CA8CG34 1229 aa11.56□□□□□ -0.56
SMARCA2-243ENST00000635590 FOXK1P85037 733 aa11.55□□□□□ -0.56
SMARCA2-243ENST00000635590 TBC1D12O60347 775 aa11.54□□□□□ -0.56
SMARCA2-243ENST00000635590 MYSM1Q5VVJ2 828 aa11.54□□□□□ -0.56
SMARCA2-243ENST00000635590 IVNS1ABPQ9Y6Y0 642 aa11.54□□□□□ -0.56
SMARCA2-243ENST00000635590 PRIM1P49642 420 aaKnown RBP11.53□□□□□ -0.56
SMARCA2-243ENST00000635590 GOLGA2Q08379 1002 aa11.53□□□□□ -0.56
SMARCA2-243ENST00000635590 RSPH4AQ5TD94 716 aa11.53□□□□□ -0.56
SMARCA2-243ENST00000635590 TTBK1Q5TCY1 1321 aaPredicted RBP11.53□□□□□ -0.56
SMARCA2-243ENST00000635590 MAP3K9P80192 1104 aa11.53□□□□□ -0.56
SMARCA2-243ENST00000635590 SND1Q7KZF4 910 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMARCA2-243ENST00000635590 FBXO31Q5XUX0 539 aaPredicted RBP11.52□□□□□ -0.57
SMARCA2-243ENST00000635590 WWC1Q8IX03 1113 aa11.52□□□□□ -0.57
SMARCA2-243ENST00000635590 MYT1LQ9UL68 1186 aa11.52□□□□□ -0.57
SMARCA2-243ENST00000635590 CARNS1A5YM72 827 aa11.51□□□□□ -0.57
SMARCA2-243ENST00000635590 EIF5BO60841 1220 aaKnown RBP11.51□□□□□ -0.57
SMARCA2-243ENST00000635590 MTMR14Q8NCE2 650 aa11.51□□□□□ -0.57
SMARCA2-243ENST00000635590 DDX12PQ92771 950 aa11.51□□□□□ -0.57
SMARCA2-243ENST00000635590 PHOX2BQ99453 314 aa11.51□□□□□ -0.57
SMARCA2-243ENST00000635590 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.51□□□□□ -0.57
SMARCA2-243ENST00000635590 UNCXA6NJT0 531 aa11.51□□□□□ -0.57
SMARCA2-243ENST00000635590 CSB-PGBD3P0DP91 1061 aa11.51□□□□□ -0.57
SMARCA2-243ENST00000635590 CLK2P49760 499 aaKnown RBP11.51□□□□□ -0.57
SMARCA2-243ENST00000635590 PTGER2P43116 358 aa11.5□□□□□ -0.57
SMARCA2-243ENST00000635590 ABL2P42684 1182 aa11.49□□□□□ -0.57
SMARCA2-243ENST00000635590 TMEM259Q4ZIN3 620 aa11.48□□□□□ -0.57
SMARCA2-243ENST00000635590 PLPP6Q8IY26 295 aa11.48□□□□□ -0.57
SMARCA2-243ENST00000635590 RFX1P22670 979 aa11.47□□□□□ -0.57
SMARCA2-243ENST00000635590 TMC2Q8TDI7 906 aa11.47□□□□□ -0.57
SMARCA2-243ENST00000635590 FAM217BQ9NTX9 383 aaPredicted RBP11.47□□□□□ -0.57
SMARCA2-243ENST00000635590 SRPK2P78362 688 aaKnown RBP11.46□□□□□ -0.57
SMARCA2-243ENST00000635590 IGSF5Q9NSI5 407 aa11.46□□□□□ -0.57
SMARCA2-243ENST00000635590 UNC13AQ9UPW8 1703 aa11.45□□□□□ -0.58
SMARCA2-243ENST00000635590 BICRAQ9NZM4 1560 aa11.44□□□□□ -0.58
SMARCA2-243ENST00000635590 CFAP70Q5T0N1 1121 aa11.44□□□□□ -0.58
SMARCA2-243ENST00000635590 FAM177A1Q8N128 213 aaPredicted RBP11.44□□□□□ -0.58
SMARCA2-243ENST00000635590 MYO15BQ96JP2 1530 aa11.43□□□□□ -0.58
SMARCA2-243ENST00000635590 PAK3O75914 559 aaPredicted RBP11.43□□□□□ -0.58
SMARCA2-243ENST00000635590 PPP2R2DQ66LE6 453 aa11.43□□□□□ -0.58
SMARCA2-243ENST00000635590 TBC1D2BQ9UPU7 963 aa11.43□□□□□ -0.58
SMARCA2-243ENST00000635590 TMEM106CQ9BVX2 250 aa11.42□□□□□ -0.58
SMARCA2-243ENST00000635590 ILDR1Q86SU0 546 aaPredicted RBP11.41□□□□□ -0.58
SMARCA2-243ENST00000635590 ADAMTS19Q8TE59 1207 aa11.4□□□□□ -0.58
SMARCA2-243ENST00000635590 UPF1Q92900 1129 aaKnown RBP eCLIP11.4□□□□□ -0.58
SMARCA2-243ENST00000635590 HDGFL1Q5TGJ6 251 aa11.39□□□□□ -0.59
SMARCA2-243ENST00000635590 TBC1D2Q9BYX2 928 aa11.39□□□□□ -0.59
SMARCA2-243ENST00000635590 RBM47A0AV96 593 aaKnown RBP11.39□□□□□ -0.59
SMARCA2-243ENST00000635590 VRTNQ9H8Y1 702 aa11.39□□□□□ -0.59
SMARCA2-243ENST00000635590 NPDC1Q9NQX5 325 aaPredicted RBP11.39□□□□□ -0.59
SMARCA2-243ENST00000635590 LIMD1Q9UGP4 676 aa11.39□□□□□ -0.59
SMARCA2-243ENST00000635590 PRM3Q9NNZ6 103 aa11.38□□□□□ -0.59
SMARCA2-243ENST00000635590 SOCS7O14512 581 aa11.37□□□□□ -0.59
SMARCA2-243ENST00000635590 CDHR5Q9HBB8 845 aa11.37□□□□□ -0.59
SMARCA2-243ENST00000635590 NLRP7Q8WX94 980 aa11.37□□□□□ -0.59
SMARCA2-243ENST00000635590 MICALL2Q8IY33 904 aa11.36□□□□□ -0.59
SMARCA2-243ENST00000635590 CHMP4AQ9BY43 222 aa11.36□□□□□ -0.59
SMARCA2-243ENST00000635590 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.35□□□□□ -0.592e-8■■■■□ 21
SMARCA2-243ENST00000635590 C2orf72A6NCS6 295 aa11.35□□□□□ -0.59
SMARCA2-243ENST00000635590 TMEM88BA6NKF7 163 aa11.34□□□□□ -0.59
SMARCA2-243ENST00000635590 PPP1R12CQ9BZL4 782 aa11.34□□□□□ -0.59
SMARCA2-243ENST00000635590 KIAA1522Q9P206 1035 aaPredicted RBP11.33□□□□□ -0.6
SMARCA2-243ENST00000635590 CECR2Q9BXF3 1484 aa11.32□□□□□ -0.6
SMARCA2-243ENST00000635590 KIF3CO14782 793 aa11.32□□□□□ -0.6
SMARCA2-243ENST00000635590 DIXDC1Q155Q3 683 aa11.32□□□□□ -0.6
SMARCA2-243ENST00000635590 DPY19L2Q6NUT2 758 aa11.32□□□□□ -0.6
SMARCA2-243ENST00000635590 GNEQ9Y223 722 aaKnown RBP11.32□□□□□ -0.6
SMARCA2-243ENST00000635590 METTL3Q86U44 580 aaKnown RBP11.31□□□□□ -0.6
SMARCA2-243ENST00000635590 FAM161AQ3B820 660 aa11.3□□□□□ -0.6
SMARCA2-243ENST00000635590 RIC3Q7Z5B4 369 aa11.3□□□□□ -0.6
SMARCA2-243ENST00000635590 CCDC125Q86Z20 511 aa11.29□□□□□ -0.6
SMARCA2-243ENST00000635590 MRRFQ96E11 262 aaKnown RBP11.29□□□□□ -0.6
SMARCA2-243ENST00000635590 TRPC6Q9Y210 931 aa11.29□□□□□ -0.6
SMARCA2-243ENST00000635590 TXNDC2Q86VQ3 553 aa11.28□□□□□ -0.6
SMARCA2-243ENST00000635590 CC2D2AQ9P2K1 1620 aa11.28□□□□□ -0.6
SMARCA2-243ENST00000635590 PALM3A6NDB9 673 aaPredicted RBP11.28□□□□□ -0.6
SMARCA2-243ENST00000635590 EVI5O60447 810 aa11.28□□□□□ -0.6
SMARCA2-243ENST00000635590 PRKAR2AP13861 404 aaKnown RBP11.27□□□□□ -0.61
SMARCA2-243ENST00000635590 LMOD1P29536 600 aaPredicted RBP11.27□□□□□ -0.61
SMARCA2-243ENST00000635590 AP1G2O75843 785 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms