RNA–Protein interactions for RNA: ENST00000635388.1

SMARCA2-239, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-239ENST00000635388 RBM33Q96EV2 1170 aaKnown RBP14.09□□□□□ -0.15
SMARCA2-239ENST00000635388 CCDC102AQ96A19 550 aa14.08□□□□□ -0.16
SMARCA2-239ENST00000635388 TMEM132AQ24JP5 1023 aa14.07□□□□□ -0.16
SMARCA2-239ENST00000635388 ZNF710Q8N1W2 664 aa14.07□□□□□ -0.16
SMARCA2-239ENST00000635388 IRF6O14896 467 aa14.06□□□□□ -0.16
SMARCA2-239ENST00000635388 ZNF454Q8N9F8 522 aa14.06□□□□□ -0.16
SMARCA2-239ENST00000635388 ZDHHC16Q969W1 377 aa14.04□□□□□ -0.16
SMARCA2-239ENST00000635388 LHX6Q9UPM6 363 aa14.04□□□□□ -0.16
SMARCA2-239ENST00000635388 PDE4DQ08499 809 aa14.03□□□□□ -0.16
SMARCA2-239ENST00000635388 ADAM33Q9BZ11 813 aa14.03□□□□□ -0.16
SMARCA2-239ENST00000635388 SNPHO15079 494 aa14.02□□□□□ -0.17
SMARCA2-239ENST00000635388 HOXB1P14653 301 aaPredicted RBP14.02□□□□□ -0.17
SMARCA2-239ENST00000635388 GPBP1L1Q9HC44 474 aaPredicted RBP14.02□□□□□ -0.17
SMARCA2-239ENST00000635388 C6orf132Q5T0Z8 1188 aa14.01□□□□□ -0.17
SMARCA2-239ENST00000635388 AMHR2Q16671 573 aa13.98□□□□□ -0.17
SMARCA2-239ENST00000635388 LHX8Q68G74 356 aa13.98□□□□□ -0.17
SMARCA2-239ENST00000635388 KDM4CQ9H3R0 1056 aa13.96□□□□□ -0.17
SMARCA2-239ENST00000635388 CERKQ8TCT0 537 aa13.94□□□□□ -0.18
SMARCA2-239ENST00000635388 PSDA5PKW4 1024 aaPredicted RBP13.93□□□□□ -0.18
SMARCA2-239ENST00000635388 PPP4R3BQ5MIZ7 849 aa13.93□□□□□ -0.18
SMARCA2-239ENST00000635388 TTC13Q8NBP0 860 aa13.93□□□□□ -0.18
SMARCA2-239ENST00000635388 BCL2L12Q9HB09 334 aa13.93□□□□□ -0.18
SMARCA2-239ENST00000635388 PARP9Q8IXQ6 854 aa13.92□□□□□ -0.18
SMARCA2-239ENST00000635388 RBM27Q9P2N5 1060 aaKnown RBP13.92□□□□□ -0.18
SMARCA2-239ENST00000635388 PADI6Q6TGC4 694 aa13.91□□□□□ -0.18
SMARCA2-239ENST00000635388 COL9A1P20849 921 aa13.88□□□□□ -0.19
SMARCA2-239ENST00000635388 PHOX2BQ99453 314 aa13.88□□□□□ -0.19
SMARCA2-239ENST00000635388 RB1CC1Q8TDY2 1594 aa13.87□□□□□ -0.19
SMARCA2-239ENST00000635388 REPIN1Q9BWE0 567 aaKnown RBP13.86□□□□□ -0.19
SMARCA2-239ENST00000635388 PRSS12P56730 875 aa13.85□□□□□ -0.19
SMARCA2-239ENST00000635388 FAM161AQ3B820 660 aa13.85□□□□□ -0.19
SMARCA2-239ENST00000635388 TMUB1Q9BVT8 246 aa13.85□□□□□ -0.19
SMARCA2-239ENST00000635388 FAM198AQ9UFP1 575 aa13.85□□□□□ -0.19
SMARCA2-239ENST00000635388 ADGRG1Q9Y653 693 aa13.85□□□□□ -0.19
SMARCA2-239ENST00000635388 PPP1R3GB7ZBB8 358 aa13.84□□□□□ -0.19
SMARCA2-239ENST00000635388 CDCA7LQ96GN5 454 aa13.84□□□□□ -0.19
SMARCA2-239ENST00000635388 METTL3Q86U44 580 aaKnown RBP13.83□□□□□ -0.2
SMARCA2-239ENST00000635388 PTPREP23469 700 aa13.82□□□□□ -0.2
SMARCA2-239ENST00000635388 FAM117AQ9C073 453 aa13.82□□□□□ -0.2
SMARCA2-239ENST00000635388 GTF3C3Q9Y5Q9 886 aa13.82□□□□□ -0.2
SMARCA2-239ENST00000635388 TTLL12Q14166 644 aaPredicted RBP13.81□□□□□ -0.2
SMARCA2-239ENST00000635388 PXYLP1Q8TE99 480 aa13.81□□□□□ -0.2
SMARCA2-239ENST00000635388 NACADO15069 1562 aa13.8□□□□□ -0.2
SMARCA2-239ENST00000635388 GIGYF2Q6Y7W6 1299 aaKnown RBP13.8□□□□□ -0.2
SMARCA2-239ENST00000635388 ST18O60284 1047 aa13.79□□□□□ -0.2
SMARCA2-239ENST00000635388 IL27Q8NEV9 243 aa13.79□□□□□ -0.2
SMARCA2-239ENST00000635388 TSKSQ9UJT2 592 aa13.79□□□□□ -0.2
SMARCA2-239ENST00000635388 PLEKHG3A1L390 1219 aa13.78□□□□□ -0.2
SMARCA2-239ENST00000635388 OATP04181 439 aa13.78□□□□□ -0.2
SMARCA2-239ENST00000635388 MS4A1P11836 297 aa13.77□□□□□ -0.21
SMARCA2-239ENST00000635388 C3orf80F5H4A9 247 aa13.76□□□□□ -0.21
SMARCA2-239ENST00000635388 MDM2Q00987 491 aaPredicted RBP13.76□□□□□ -0.21
SMARCA2-239ENST00000635388 CLCN1P35523 988 aa13.75□□□□□ -0.21
SMARCA2-239ENST00000635388 POTEEQ6S8J3 1075 aa13.75□□□□□ -0.21
SMARCA2-239ENST00000635388 NLRP7Q8WX94 980 aa13.75□□□□□ -0.21
SMARCA2-239ENST00000635388 GPCPD1Q9NPB8 672 aa13.75□□□□□ -0.21
SMARCA2-239ENST00000635388 KCNK17Q96T54 332 aa13.74□□□□□ -0.21
SMARCA2-239ENST00000635388 TRIM6-TRIM34B2RNG4 842 aa13.73□□□□□ -0.21
SMARCA2-239ENST00000635388 VARS2Q5ST30 1063 aaKnown RBP13.73□□□□□ -0.21
SMARCA2-239ENST00000635388 DDRGK1Q96HY6 314 aa13.73□□□□□ -0.21
SMARCA2-239ENST00000635388 DAXXQ9UER7 740 aaPredicted RBP13.73□□□□□ -0.21
SMARCA2-239ENST00000635388 EYA1Q99502 592 aa13.72□□□□□ -0.21
SMARCA2-239ENST00000635388 ERBB3P21860 1342 aa13.71□□□□□ -0.21
SMARCA2-239ENST00000635388 PROX2Q3B8N5 592 aa13.7□□□□□ -0.22
SMARCA2-239ENST00000635388 RBM46Q8TBY0 533 aaKnown RBP13.7□□□□□ -0.22
SMARCA2-239ENST00000635388 PSEN2P49810 448 aa13.69□□□□□ -0.22
SMARCA2-239ENST00000635388 MARVELD3Q96A59 401 aa13.69□□□□□ -0.22
SMARCA2-239ENST00000635388 ZBED2Q9BTP6 218 aa13.69□□□□□ -0.22
SMARCA2-239ENST00000635388 EMP3P54852 163 aa13.68□□□□□ -0.22
SMARCA2-239ENST00000635388 FAM217BQ9NTX9 383 aaPredicted RBP13.68□□□□□ -0.22
SMARCA2-239ENST00000635388 ONECUT3O60422 494 aaPredicted RBP13.67□□□□□ -0.22
SMARCA2-239ENST00000635388 LCE2DQ5TA82 110 aaPredicted RBP13.67□□□□□ -0.22
SMARCA2-239ENST00000635388 ZCCHC6Q5VYS8 1495 aaKnown RBP13.67□□□□□ -0.22
SMARCA2-239ENST00000635388 MYO15BQ96JP2 1530 aa13.66□□□□□ -0.22
SMARCA2-239ENST00000635388 NUDT18Q6ZVK8 323 aa13.66□□□□□ -0.22
SMARCA2-239ENST00000635388 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.65□□□□□ -0.22
SMARCA2-239ENST00000635388 RCCD1A6NED2 376 aa13.65□□□□□ -0.22
SMARCA2-239ENST00000635388 NBPF26B4DH59 902 aa13.65□□□□□ -0.22
SMARCA2-239ENST00000635388 SSTR3P32745 418 aaPredicted RBP13.65□□□□□ -0.22
SMARCA2-239ENST00000635388 TATDN2Q93075 761 aa13.65□□□□□ -0.22
SMARCA2-239ENST00000635388 UNC13AQ9UPW8 1703 aa13.64□□□□□ -0.23
SMARCA2-239ENST00000635388 ARHGAP33O14559 1287 aa13.64□□□□□ -0.23
SMARCA2-239ENST00000635388 POTEB3A0JP26 581 aa13.63□□□□□ -0.23
SMARCA2-239ENST00000635388 DMRTA1Q5VZB9 504 aa13.63□□□□□ -0.23
SMARCA2-239ENST00000635388 POTEBQ6S5H4 581 aa13.63□□□□□ -0.23
SMARCA2-239ENST00000635388 KCNH8Q96L42 1107 aa13.63□□□□□ -0.23
SMARCA2-239ENST00000635388 PNMA3Q9UL41 463 aa13.63□□□□□ -0.23
SMARCA2-239ENST00000635388 TIMELESSQ9UNS1 1208 aa13.63□□□□□ -0.23
SMARCA2-239ENST00000635388 PACS2Q86VP3 889 aa13.62□□□□□ -0.23
SMARCA2-239ENST00000635388 ZNF687Q8N1G0 1237 aa13.62□□□□□ -0.23
SMARCA2-239ENST00000635388 SLC4A5Q9BY07 1137 aa13.62□□□□□ -0.23
SMARCA2-239ENST00000635388 AXIN2Q9Y2T1 843 aa13.62□□□□□ -0.23
SMARCA2-239ENST00000635388 FAM205CA6NFA0 338 aa13.61□□□□□ -0.23
SMARCA2-239ENST00000635388 PBX2P40425 430 aa13.61□□□□□ -0.23
SMARCA2-239ENST00000635388 SMAPO00193 183 aa13.6□□□□□ -0.23
SMARCA2-239ENST00000635388 GOPCQ9HD26 462 aa13.6□□□□□ -0.23
SMARCA2-239ENST00000635388 DNAJB2P25686 324 aa13.59□□□□□ -0.23
SMARCA2-239ENST00000635388 FAM163AQ96GL9 167 aaPredicted RBP13.59□□□□□ -0.23
SMARCA2-239ENST00000635388 TMEM134Q9H6X4 195 aa13.59□□□□□ -0.23
SMARCA2-239ENST00000635388 KIAA1468Q9P260 1216 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms