RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 SEPT9Q9UHD8 586 aaPredicted RBP7.79□□□□□ -1.16
SMARCB1-208ENST00000634926 PDE4AP27815 886 aa7.78□□□□□ -1.16
SMARCB1-208ENST00000634926 LARP6Q9BRS8 491 aaKnown RBP7.78□□□□□ -1.16
SMARCB1-208ENST00000634926 MAP3K9P80192 1104 aa7.76□□□□□ -1.17
SMARCB1-208ENST00000634926 KCNC4Q03721 635 aa7.75□□□□□ -1.17
SMARCB1-208ENST00000634926 MFSD10Q14728 455 aa7.75□□□□□ -1.17
SMARCB1-208ENST00000634926 GTPBP6O43824 516 aaPredicted RBP7.74□□□□□ -1.17
SMARCB1-208ENST00000634926 LAPTM4BQ86VI4 370 aa7.74□□□□□ -1.17
SMARCB1-208ENST00000634926 DDX27Q96GQ7 796 aaKnown RBP7.74□□□□□ -1.17
SMARCB1-208ENST00000634926 TRAF7Q6Q0C0 670 aa7.73□□□□□ -1.17
SMARCB1-208ENST00000634926 GFRA3O60609 400 aa7.72□□□□□ -1.17
SMARCB1-208ENST00000634926 TYW1BQ6NUM6 668 aa7.72□□□□□ -1.17
SMARCB1-208ENST00000634926 CADPS2Q86UW7 1296 aa7.72□□□□□ -1.17
SMARCB1-208ENST00000634926 PHF14O94880 888 aa7.71□□□□□ -1.18
SMARCB1-208ENST00000634926 C6orf132Q5T0Z8 1188 aa7.71□□□□□ -1.18
SMARCB1-208ENST00000634926 HPS5Q9UPZ3 1129 aa7.7□□□□□ -1.18
SMARCB1-208ENST00000634926 TRIM6-TRIM34B2RNG4 842 aa7.69□□□□□ -1.18
SMARCB1-208ENST00000634926 NYAP1Q6ZVC0 841 aa7.69□□□□□ -1.18
SMARCB1-208ENST00000634926 FBXW7Q969H0 707 aa7.69□□□□□ -1.18
SMARCB1-208ENST00000634926 TJAP1Q5JTD0 557 aa7.68□□□□□ -1.18
SMARCB1-208ENST00000634926 TSR3Q9UJK0 312 aaKnown RBP7.68□□□□□ -1.18
SMARCB1-208ENST00000634926 C3orf80F5H4A9 247 aa7.67□□□□□ -1.18
SMARCB1-208ENST00000634926 ONECUT3O60422 494 aaPredicted RBP7.67□□□□□ -1.18
SMARCB1-208ENST00000634926 FAM98CQ17RN3 349 aaKnown RBP7.67□□□□□ -1.18
SMARCB1-208ENST00000634926 RBM33Q96EV2 1170 aaKnown RBP7.67□□□□□ -1.18
SMARCB1-208ENST00000634926 PRKD2Q9BZL6 878 aa7.67□□□□□ -1.18
SMARCB1-208ENST00000634926 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.67□□□□□ -1.18
SMARCB1-208ENST00000634926 TSKSQ9UJT2 592 aa7.66□□□□□ -1.18
SMARCB1-208ENST00000634926 LAPTM4AQ15012 233 aa7.65□□□□□ -1.18
SMARCB1-208ENST00000634926 LRCH3Q96II8 777 aa7.64□□□□□ -1.19
SMARCB1-208ENST00000634926 RYDENQ9NUL5 291 aaKnown RBP7.64□□□□□ -1.19
SMARCB1-208ENST00000634926 FAM198AQ9UFP1 575 aa7.64□□□□□ -1.19
SMARCB1-208ENST00000634926 DPYSL4O14531 572 aa7.63□□□□□ -1.19
SMARCB1-208ENST00000634926 TSR1Q2NL82 804 aaKnown RBP7.63□□□□□ -1.19
SMARCB1-208ENST00000634926 SMAPO00193 183 aa7.62□□□□□ -1.19
SMARCB1-208ENST00000634926 PPP1R18Q6NYC8 613 aa7.62□□□□□ -1.19
SMARCB1-208ENST00000634926 ZNF516Q92618 1163 aa7.62□□□□□ -1.19
SMARCB1-208ENST00000634926 DDX12PQ92771 950 aa7.62□□□□□ -1.19
SMARCB1-208ENST00000634926 NRG2O14511 850 aaPredicted RBP7.61□□□□□ -1.19
SMARCB1-208ENST00000634926 CAMK2BQ13554 666 aa7.61□□□□□ -1.19
SMARCB1-208ENST00000634926 EPAS1Q99814 870 aa7.61□□□□□ -1.19
SMARCB1-208ENST00000634926 PRIM1P49642 420 aaKnown RBP7.6□□□□□ -1.19
SMARCB1-208ENST00000634926 NKX2-3Q8TAU0 364 aa7.6□□□□□ -1.19
SMARCB1-208ENST00000634926 MTRQ99707 1265 aa7.6□□□□□ -1.19
SMARCB1-208ENST00000634926 PPP4CP60510 307 aa7.59□□□□□ -1.19
SMARCB1-208ENST00000634926 SAMD7Q7Z3H4 446 aa7.59□□□□□ -1.19
SMARCB1-208ENST00000634926 ZNF775Q96BV0 537 aaPredicted RBP7.59□□□□□ -1.19
SMARCB1-208ENST00000634926 ZNF787Q6DD87 383 aa7.57□□□□□ -1.2
SMARCB1-208ENST00000634926 EN1Q05925 392 aaPredicted RBP7.55□□□□□ -1.2
SMARCB1-208ENST00000634926 V9GY48 417 aaPredicted RBP7.55□□□□□ -1.2
SMARCB1-208ENST00000634926 APLP1P51693 650 aa7.54□□□□□ -1.2
SMARCB1-208ENST00000634926 PACS2Q86VP3 889 aa7.54□□□□□ -1.2
SMARCB1-208ENST00000634926 IL21Q9HBE4 155 aa7.54□□□□□ -1.2
SMARCB1-208ENST00000634926 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.54□□□□□ -1.2
SMARCB1-208ENST00000634926 PDZRN3Q9UPQ7 1066 aa7.54□□□□□ -1.2
SMARCB1-208ENST00000634926 NBR1Q14596 966 aa7.53□□□□□ -1.2
SMARCB1-208ENST00000634926 TRIM67Q6ZTA4 783 aa7.53□□□□□ -1.2
SMARCB1-208ENST00000634926 EMID1Q96A84 441 aaPredicted RBP7.53□□□□□ -1.2
SMARCB1-208ENST00000634926 CDCA7LQ96GN5 454 aa7.53□□□□□ -1.2
SMARCB1-208ENST00000634926 POTECB2RU33 542 aa7.52□□□□□ -1.21
SMARCB1-208ENST00000634926 MAP3K7O43318 606 aa7.52□□□□□ -1.21
SMARCB1-208ENST00000634926 PRSS12P56730 875 aa7.51□□□□□ -1.21
SMARCB1-208ENST00000634926 TATDN2Q93075 761 aa7.5□□□□□ -1.21
SMARCB1-208ENST00000634926 CDHR5Q9HBB8 845 aa7.48□□□□□ -1.21
SMARCB1-208ENST00000634926 PNMA3Q9UL41 463 aa7.48□□□□□ -1.21
SMARCB1-208ENST00000634926 COPS2P61201 443 aa7.47□□□□□ -1.21
SMARCB1-208ENST00000634926 PDIA6Q15084 440 aa7.47□□□□□ -1.21
SMARCB1-208ENST00000634926 NUDT18Q6ZVK8 323 aa7.45□□□□□ -1.22
SMARCB1-208ENST00000634926 RNF40O75150 1001 aa7.44□□□□□ -1.22
SMARCB1-208ENST00000634926 MYT1Q01538 1121 aa7.44□□□□□ -1.22
SMARCB1-208ENST00000634926 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
SMARCB1-208ENST00000634926 NBPF26B4DH59 902 aa7.41□□□□□ -1.22
SMARCB1-208ENST00000634926 RNF223E7ERA6 249 aa7.41□□□□□ -1.22
SMARCB1-208ENST00000634926 SWT1Q5T5J6 900 aaKnown RBP7.41□□□□□ -1.22
SMARCB1-208ENST00000634926 GRXCR2A6NFK2 248 aa7.4□□□□□ -1.22
SMARCB1-208ENST00000634926 ZPR1O75312 459 aa7.4□□□□□ -1.22
SMARCB1-208ENST00000634926 OSBPP22059 807 aa7.4□□□□□ -1.22
SMARCB1-208ENST00000634926 TTC13Q8NBP0 860 aa7.4□□□□□ -1.22
SMARCB1-208ENST00000634926 NPDC1Q9NQX5 325 aaPredicted RBP7.4□□□□□ -1.22
SMARCB1-208ENST00000634926 PPEF1O14829 653 aaPredicted RBP7.39□□□□□ -1.23
SMARCB1-208ENST00000634926 TLL1O43897 1013 aa7.38□□□□□ -1.23
SMARCB1-208ENST00000634926 SLC19A1P41440 591 aa7.38□□□□□ -1.23
SMARCB1-208ENST00000634926 LIAT1Q6ZQX7 453 aa7.38□□□□□ -1.23
SMARCB1-208ENST00000634926 TMUB1Q9BVT8 246 aa7.38□□□□□ -1.23
SMARCB1-208ENST00000634926 SPRYD7Q5W111 196 aa7.37□□□□□ -1.23
SMARCB1-208ENST00000634926 CERKQ8TCT0 537 aa7.37□□□□□ -1.23
SMARCB1-208ENST00000634926 SPDYE16A6NNV3 312 aaPredicted RBP7.36□□□□□ -1.23
SMARCB1-208ENST00000634926 BLOC1S3Q6QNY0 202 aa7.36□□□□□ -1.23
SMARCB1-208ENST00000634926 PADI6Q6TGC4 694 aa7.36□□□□□ -1.23
SMARCB1-208ENST00000634926 ST8SIA5O15466 376 aa7.35□□□□□ -1.23
SMARCB1-208ENST00000634926 GGCXP38435 758 aa7.35□□□□□ -1.23
SMARCB1-208ENST00000634926 TNFRSF10AO00220 468 aa7.34□□□□□ -1.23
SMARCB1-208ENST00000634926 GDF9O60383 454 aa7.34□□□□□ -1.23
SMARCB1-208ENST00000634926 DGAT1O75907 488 aa7.34□□□□□ -1.23
SMARCB1-208ENST00000634926 PKDCCQ504Y2 493 aa7.34□□□□□ -1.23
SMARCB1-208ENST00000634926 EYA1Q99502 592 aa7.34□□□□□ -1.23
SMARCB1-208ENST00000634926 DCAF8L2P0C7V8 631 aa7.33□□□□□ -1.24
SMARCB1-208ENST00000634926 PRR20EP86478 221 aa7.33□□□□□ -1.24
SMARCB1-208ENST00000634926 PRR20CP86479 221 aa7.33□□□□□ -1.24
SMARCB1-208ENST00000634926 PRR20DP86480 221 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms