RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 C11orf95C9JLR9 678 aaPredicted RBP11.13□□□□□ -0.63
GPC3-204ENST00000631057 PRKRIP1Q9H875 184 aaPredicted RBP11.13□□□□□ -0.63
GPC3-204ENST00000631057 MYO5CQ9NQX4 1742 aa11.13□□□□□ -0.63
GPC3-204ENST00000631057 RALGAPBQ86X10 1494 aa11.13□□□□□ -0.63
GPC3-204ENST00000631057 BCORL1Q5H9F3 1711 aa11.12□□□□□ -0.63
GPC3-204ENST00000631057 USP47Q96K76 1375 aa11.12□□□□□ -0.63
GPC3-204ENST00000631057 ARID4BQ4LE39 1312 aaPredicted RBP11.12□□□□□ -0.63
GPC3-204ENST00000631057 HAP1P54257 671 aaPredicted RBP11.11□□□□□ -0.63
GPC3-204ENST00000631057 RSPH4AQ5TD94 716 aa11.11□□□□□ -0.63
GPC3-204ENST00000631057 TSHZ2Q9NRE2 1034 aa11.11□□□□□ -0.63
GPC3-204ENST00000631057 UNC13BO14795 1591 aa11.09□□□□□ -0.63
GPC3-204ENST00000631057 TTC37Q6PGP7 1564 aa11.09□□□□□ -0.63
GPC3-204ENST00000631057 PLXNC1O60486 1568 aa11.09□□□□□ -0.63
GPC3-204ENST00000631057 ARHGAP5Q13017 1502 aa11.09□□□□□ -0.63
GPC3-204ENST00000631057 ABCC2Q92887 1545 aa11.09□□□□□ -0.63
GPC3-204ENST00000631057 FAM135AQ9P2D6 1515 aa11.09□□□□□ -0.63
GPC3-204ENST00000631057 PLEKHH2Q8IVE3 1493 aa11.08□□□□□ -0.64
GPC3-204ENST00000631057 HNRNPMP52272 730 aaKnown RBP eCLIP11.08□□□□□ -0.646e-7■■■□□ 17.1
GPC3-204ENST00000631057 MRS2Q9HD23 443 aa11.08□□□□□ -0.64
GPC3-204ENST00000631057 ROCK2O75116 1388 aaKnown RBP11.08□□□□□ -0.64
GPC3-204ENST00000631057 SYCP2Q9BX26 1530 aa11.08□□□□□ -0.64
GPC3-204ENST00000631057 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.07□□□□□ -0.64
GPC3-204ENST00000631057 ZNF326Q5BKZ1 582 aaKnown RBP11.07□□□□□ -0.64
GPC3-204ENST00000631057 IQGAP3Q86VI3 1631 aa11.06□□□□□ -0.64
GPC3-204ENST00000631057 DHX29Q7Z478 1369 aaKnown RBP11.06□□□□□ -0.64
GPC3-204ENST00000631057 ZBED9Q6R2W3 1325 aa11.05□□□□□ -0.64
GPC3-204ENST00000631057 CCDC184Q52MB2 194 aa11.05□□□□□ -0.64
GPC3-204ENST00000631057 ERICH6BQ5W0A0 696 aa11.05□□□□□ -0.64
GPC3-204ENST00000631057 RNF39Q9H2S5 420 aa11.05□□□□□ -0.64
GPC3-204ENST00000631057 E9PCH4 1651 aa11.04□□□□□ -0.64
GPC3-204ENST00000631057 TRPM1Q7Z4N2 1603 aa11.04□□□□□ -0.64
GPC3-204ENST00000631057 FAM9BQ8IZU0 186 aa11.03□□□□□ -0.64
GPC3-204ENST00000631057 LAMC1P11047 1609 aa11.03□□□□□ -0.64
GPC3-204ENST00000631057 ZCCHC11Q5TAX3 1644 aaKnown RBP11.03□□□□□ -0.64
GPC3-204ENST00000631057 CARD11Q9BXL7 1154 aa11.03□□□□□ -0.64
GPC3-204ENST00000631057 DUOX2Q9NRD8 1548 aa11.03□□□□□ -0.64
GPC3-204ENST00000631057 CCDC144AA2RUR9 1427 aa11.02□□□□□ -0.65
GPC3-204ENST00000631057 ERCC6L2Q5T890 1561 aa11.02□□□□□ -0.65
GPC3-204ENST00000631057 UHRF1BP1LA0JNW5 1464 aa11.01□□□□□ -0.65
GPC3-204ENST00000631057 RNF216Q9NWF9 866 aaPredicted RBP11.01□□□□□ -0.65
GPC3-204ENST00000631057 EIF2AK4Q9P2K8 1649 aaKnown RBP11.01□□□□□ -0.65
GPC3-204ENST00000631057 KTN1Q86UP2 1357 aaKnown RBP11□□□□□ -0.65
GPC3-204ENST00000631057 MAGI2Q86UL8 1455 aa11□□□□□ -0.65
GPC3-204ENST00000631057 PRAG1Q86YV5 1406 aa11□□□□□ -0.65
GPC3-204ENST00000631057 ERBINQ96RT1 1412 aa11□□□□□ -0.65
GPC3-204ENST00000631057 DCAF11Q8TEB1 546 aa10.99□□□□□ -0.65
GPC3-204ENST00000631057 POLR3GLQ9BT43 218 aa10.99□□□□□ -0.65
GPC3-204ENST00000631057 VSIG10Q8N0Z9 540 aa10.99□□□□□ -0.65
GPC3-204ENST00000631057 KDM2AQ9Y2K7 1162 aa10.99□□□□□ -0.65
GPC3-204ENST00000631057 ABCC1P33527 1531 aa10.98□□□□□ -0.65
GPC3-204ENST00000631057 PLCH2O75038 1416 aa10.98□□□□□ -0.65
GPC3-204ENST00000631057 ATP10AO60312 1499 aa10.98□□□□□ -0.65
GPC3-204ENST00000631057 ARAP3Q8WWN8 1544 aa10.97□□□□□ -0.65
GPC3-204ENST00000631057 GPRASP1Q5JY77 1395 aa10.97□□□□□ -0.65
GPC3-204ENST00000631057 PLA2R1Q13018 1463 aa10.97□□□□□ -0.65
GPC3-204ENST00000631057 ST20-MTHFSA0A0A6YYL1 179 aa10.96□□□□□ -0.65
GPC3-204ENST00000631057 DCAF8L1A6NGE4 600 aa10.96□□□□□ -0.65
GPC3-204ENST00000631057 PPP4R2Q9NY27 417 aa10.96□□□□□ -0.65
GPC3-204ENST00000631057 SMG6Q86US8 1419 aaKnown RBP10.96□□□□□ -0.66
GPC3-204ENST00000631057 A2MP01023 1474 aa10.96□□□□□ -0.66
GPC3-204ENST00000631057 PRDM15P57071 1507 aaPredicted RBP10.96□□□□□ -0.66
GPC3-204ENST00000631057 MYCNP04198 464 aaPredicted RBP10.95□□□□□ -0.66
GPC3-204ENST00000631057 EFCAB2Q5VUJ9 269 aa10.95□□□□□ -0.66
GPC3-204ENST00000631057 RALBP1Q15311 655 aa10.94□□□□□ -0.66
GPC3-204ENST00000631057 TPRNQ4KMQ1 711 aa10.94□□□□□ -0.66
GPC3-204ENST00000631057 BRD4O60885 1362 aaPredicted RBP10.94□□□□□ -0.66
GPC3-204ENST00000631057 RNF17Q9BXT8 1623 aaKnown RBP10.94□□□□□ -0.66
GPC3-204ENST00000631057 IRX6P78412 446 aaPredicted RBP10.94□□□□□ -0.66
GPC3-204ENST00000631057 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.94□□□□□ -0.666e-7■□□□□ 8.4
GPC3-204ENST00000631057 SLC4A2P04920 1241 aa10.93□□□□□ -0.66
GPC3-204ENST00000631057 TMC1Q8TDI8 760 aa10.93□□□□□ -0.66
GPC3-204ENST00000631057 CEP152O94986 1710 aa10.93□□□□□ -0.66
GPC3-204ENST00000631057 COL17A1Q9UMD9 1497 aaPredicted RBP10.92□□□□□ -0.66
GPC3-204ENST00000631057 MYBBP1AQ9BQG0 1328 aaKnown RBP10.92□□□□□ -0.66
GPC3-204ENST00000631057 DAXXQ9UER7 740 aaPredicted RBP10.92□□□□□ -0.66
GPC3-204ENST00000631057 RBM19Q9Y4C8 960 aaKnown RBP10.92□□□□□ -0.66
GPC3-204ENST00000631057 SPHKAPQ2M3C7 1700 aa10.92□□□□□ -0.66
GPC3-204ENST00000631057 RTEL1-TNFRSF6BF6WH68 1400 aa10.92□□□□□ -0.66
GPC3-204ENST00000631057 PNISRQ8TF01 805 aaKnown RBP10.91□□□□□ -0.66
GPC3-204ENST00000631057 DEPDC5O75140 1603 aa10.91□□□□□ -0.66
GPC3-204ENST00000631057 LRPPRCP42704 1394 aaKnown RBP10.91□□□□□ -0.66
GPC3-204ENST00000631057 NPM1P06748 294 aaKnown RBP eCLIP10.9□□□□□ -0.66
GPC3-204ENST00000631057 C1QBPQ07021 282 aaKnown RBP10.9□□□□□ -0.66
GPC3-204ENST00000631057 NUDCQ9Y266 331 aa10.9□□□□□ -0.66
GPC3-204ENST00000631057 ZFYVE16Q7Z3T8 1539 aa10.9□□□□□ -0.66
GPC3-204ENST00000631057 TRAPPC8Q9Y2L5 1435 aa10.9□□□□□ -0.66
GPC3-204ENST00000631057 TET3O43151 1660 aa10.9□□□□□ -0.66
GPC3-204ENST00000631057 RGL3Q3MIN7 710 aa10.9□□□□□ -0.67
GPC3-204ENST00000631057 ABCA9Q8IUA7 1624 aa10.89□□□□□ -0.67
GPC3-204ENST00000631057 TRPM2O94759 1503 aa10.89□□□□□ -0.67
GPC3-204ENST00000631057 CNGB1Q14028 1251 aaPredicted RBP10.89□□□□□ -0.67
GPC3-204ENST00000631057 MADDQ8WXG6 1647 aa10.89□□□□□ -0.67
GPC3-204ENST00000631057 PARD3Q8TEW0 1356 aa10.88□□□□□ -0.67
GPC3-204ENST00000631057 SPAG9O60271 1321 aaKnown RBP10.88□□□□□ -0.67
GPC3-204ENST00000631057 IQGAP1P46940 1657 aa10.88□□□□□ -0.67
GPC3-204ENST00000631057 INO80Q9ULG1 1556 aaPredicted RBP10.88□□□□□ -0.67
GPC3-204ENST00000631057 WASHC2CQ9Y4E1 1318 aa10.87□□□□□ -0.67
GPC3-204ENST00000631057 WDR7Q9Y4E6 1490 aa10.87□□□□□ -0.67
GPC3-204ENST00000631057 NBPF1Q3BBV0 1214 aa10.87□□□□□ -0.67
GPC3-204ENST00000631057 NLRP13Q86W25 1043 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms