RNA–Protein interactions for RNA: ENST00000630920.1

CCAT2-201, colon cancer associated transcript 2, humanhuman

BASIC

Gene CCAT2, Length 1,752 nt, Biotype lincRNA, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCAT2-201ENST00000630920 L3MBTL3Q96JM7 780 aaPredicted RBP9.95□□□□□ -0.82
CCAT2-201ENST00000630920 NPDC1Q9NQX5 325 aaPredicted RBP9.95□□□□□ -0.82
CCAT2-201ENST00000630920 CLCN6P51797 869 aa9.94□□□□□ -0.82
CCAT2-201ENST00000630920 PHOX2BQ99453 314 aa9.93□□□□□ -0.82
CCAT2-201ENST00000630920 PTCD2Q8WV60 388 aaKnown RBP9.93□□□□□ -0.82
CCAT2-201ENST00000630920 APBB1O00213 710 aa9.92□□□□□ -0.82
CCAT2-201ENST00000630920 PCGF6Q9BYE7 350 aa9.91□□□□□ -0.82
CCAT2-201ENST00000630920 EN1Q05925 392 aaPredicted RBP9.91□□□□□ -0.82
CCAT2-201ENST00000630920 CLUAP1Q96AJ1 413 aa9.91□□□□□ -0.82
CCAT2-201ENST00000630920 TMUB1Q9BVT8 246 aa9.91□□□□□ -0.82
CCAT2-201ENST00000630920 SEC24BO95487 1268 aa9.88□□□□□ -0.83
CCAT2-201ENST00000630920 TSR1Q2NL82 804 aaKnown RBP9.88□□□□□ -0.83
CCAT2-201ENST00000630920 PCMTD1Q96MG8 357 aaPredicted RBP9.88□□□□□ -0.83
CCAT2-201ENST00000630920 MAP3K7O43318 606 aa9.88□□□□□ -0.83
CCAT2-201ENST00000630920 MDM2Q00987 491 aaPredicted RBP9.88□□□□□ -0.83
CCAT2-201ENST00000630920 TRIM26Q12899 539 aaPredicted RBP9.88□□□□□ -0.83
CCAT2-201ENST00000630920 POTEFA5A3E0 1075 aa9.86□□□□□ -0.83
CCAT2-201ENST00000630920 PHF14O94880 888 aa9.86□□□□□ -0.83
CCAT2-201ENST00000630920 CLCN1P35523 988 aa9.86□□□□□ -0.83
CCAT2-201ENST00000630920 RANGAP1P46060 587 aaPredicted RBP9.86□□□□□ -0.83
CCAT2-201ENST00000630920 MCM6Q14566 821 aa9.86□□□□□ -0.83
CCAT2-201ENST00000630920 SH3D19Q5HYK7 790 aa9.86□□□□□ -0.83
CCAT2-201ENST00000630920 RBM33Q96EV2 1170 aaKnown RBP9.86□□□□□ -0.83
CCAT2-201ENST00000630920 GPCPD1Q9NPB8 672 aa9.86□□□□□ -0.83
CCAT2-201ENST00000630920 SLC34A2O95436 690 aa9.86□□□□□ -0.83
CCAT2-201ENST00000630920 PCDHGA10Q9Y5H3 936 aa9.86□□□□□ -0.83
CCAT2-201ENST00000630920 ZEB1P37275 1124 aaPredicted RBP9.85□□□□□ -0.83
CCAT2-201ENST00000630920 FAM161AQ3B820 660 aa9.85□□□□□ -0.83
CCAT2-201ENST00000630920 POTEHQ6S545 545 aa9.84□□□□□ -0.83
CCAT2-201ENST00000630920 NLRP7Q8WX94 980 aa9.84□□□□□ -0.83
CCAT2-201ENST00000630920 PKNOX2Q96KN3 472 aa9.84□□□□□ -0.83
CCAT2-201ENST00000630920 A6NJR5 290 aa9.83□□□□□ -0.84
CCAT2-201ENST00000630920 EPAS1Q99814 870 aa9.83□□□□□ -0.84
CCAT2-201ENST00000630920 SSTR3P32745 418 aaPredicted RBP9.83□□□□□ -0.84
CCAT2-201ENST00000630920 TRAK2O60296 914 aa9.82□□□□□ -0.84
CCAT2-201ENST00000630920 SLAIN1Q8ND83 568 aa9.82□□□□□ -0.84
CCAT2-201ENST00000630920 BEGAINQ9BUH8 593 aa9.82□□□□□ -0.84
CCAT2-201ENST00000630920 METTL3Q86U44 580 aaKnown RBP9.81□□□□□ -0.84
CCAT2-201ENST00000630920 CCDC82Q8N4S0 544 aa9.81□□□□□ -0.84
CCAT2-201ENST00000630920 SKIV2LQ15477 1246 aaKnown RBP9.8□□□□□ -0.84
CCAT2-201ENST00000630920 C3orf67Q6ZVT6 689 aa9.8□□□□□ -0.84
CCAT2-201ENST00000630920 PROCA1Q8NCQ7 364 aaPredicted RBP9.8□□□□□ -0.84
CCAT2-201ENST00000630920 FAM217BQ9NTX9 383 aaPredicted RBP9.8□□□□□ -0.84
CCAT2-201ENST00000630920 GABBR2O75899 941 aa9.79□□□□□ -0.84
CCAT2-201ENST00000630920 POLR3EQ9NVU0 708 aa9.78□□□□□ -0.84
CCAT2-201ENST00000630920 POM121Q96HA1 1249 aa9.78□□□□□ -0.84
CCAT2-201ENST00000630920 TYW1BQ6NUM6 668 aa9.77□□□□□ -0.85
CCAT2-201ENST00000630920 KDM4FA0A1W2PPD8 638 aa9.76□□□□□ -0.85
CCAT2-201ENST00000630920 PADI6Q6TGC4 694 aa9.76□□□□□ -0.85
CCAT2-201ENST00000630920 SLC39A7Q92504 469 aa9.76□□□□□ -0.85
CCAT2-201ENST00000630920 PCDHGA4Q9Y5G9 962 aa9.76□□□□□ -0.85
CCAT2-201ENST00000630920 DCBLD2Q96PD2 775 aa9.75□□□□□ -0.85
CCAT2-201ENST00000630920 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.75□□□□□ -0.85
CCAT2-201ENST00000630920 MYSM1Q5VVJ2 828 aa9.75□□□□□ -0.85
CCAT2-201ENST00000630920 PXYLP1Q8TE99 480 aa9.75□□□□□ -0.85
CCAT2-201ENST00000630920 JPH4Q96JJ6 628 aa9.75□□□□□ -0.85
CCAT2-201ENST00000630920 PROSER2Q86WR7 435 aaPredicted RBP9.74□□□□□ -0.85
CCAT2-201ENST00000630920 METRNQ9UJH8 293 aa9.74□□□□□ -0.85
CCAT2-201ENST00000630920 ADGRG1Q9Y653 693 aa9.74□□□□□ -0.85
CCAT2-201ENST00000630920 C7P10643 843 aa9.73□□□□□ -0.85
CCAT2-201ENST00000630920 FNBP4Q8N3X1 1017 aaPredicted RBP9.73□□□□□ -0.85
CCAT2-201ENST00000630920 FBXW7Q969H0 707 aa9.73□□□□□ -0.85
CCAT2-201ENST00000630920 OATP04181 439 aa9.73□□□□□ -0.85
CCAT2-201ENST00000630920 FBXO31Q5XUX0 539 aaPredicted RBP9.73□□□□□ -0.85
CCAT2-201ENST00000630920 SALL2Q9Y467 1007 aaPredicted RBP9.73□□□□□ -0.85
CCAT2-201ENST00000630920 ZNF777Q9ULD5 760 aaPredicted RBP9.72□□□□□ -0.85
CCAT2-201ENST00000630920 ATP1B4Q9UN42 357 aaPredicted RBP9.72□□□□□ -0.85
CCAT2-201ENST00000630920 FOSBP53539 338 aa9.71□□□□□ -0.85
CCAT2-201ENST00000630920 C6orf132Q5T0Z8 1188 aa9.71□□□□□ -0.85
CCAT2-201ENST00000630920 TTC13Q8NBP0 860 aa9.7□□□□□ -0.86
CCAT2-201ENST00000630920 CLK2P49760 499 aaKnown RBP9.69□□□□□ -0.86
CCAT2-201ENST00000630920 NPM2Q86SE8 214 aaKnown RBP9.69□□□□□ -0.86
CCAT2-201ENST00000630920 CERKQ8TCT0 537 aa9.68□□□□□ -0.86
CCAT2-201ENST00000630920 TBC1D2Q9BYX2 928 aa9.68□□□□□ -0.86
CCAT2-201ENST00000630920 ZNF454Q8N9F8 522 aa9.67□□□□□ -0.86
CCAT2-201ENST00000630920 SNRKQ9NRH2 765 aa9.67□□□□□ -0.86
CCAT2-201ENST00000630920 RBM27Q9P2N5 1060 aaKnown RBP9.67□□□□□ -0.86
CCAT2-201ENST00000630920 COG6Q9Y2V7 657 aa9.67□□□□□ -0.86
CCAT2-201ENST00000630920 SPDYE5A6NIY4 337 aa9.66□□□□□ -0.86
CCAT2-201ENST00000630920 RFC5P40937 340 aa9.66□□□□□ -0.86
CCAT2-201ENST00000630920 ZDHHC16Q969W1 377 aa9.66□□□□□ -0.86
CCAT2-201ENST00000630920 ADAM33Q9BZ11 813 aa9.66□□□□□ -0.86
CCAT2-201ENST00000630920 RAD21O60216 631 aa9.65□□□□□ -0.86
CCAT2-201ENST00000630920 PDIA4P13667 645 aaKnown RBP9.65□□□□□ -0.86
CCAT2-201ENST00000630920 CCDC136Q96JN2 1154 aa9.65□□□□□ -0.86
CCAT2-201ENST00000630920 LIMD1Q9UGP4 676 aa9.65□□□□□ -0.86
CCAT2-201ENST00000630920 POTEIP0CG38 1075 aa9.65□□□□□ -0.87
CCAT2-201ENST00000630920 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.65□□□□□ -0.87
CCAT2-201ENST00000630920 MYO15BQ96JP2 1530 aa9.64□□□□□ -0.87
CCAT2-201ENST00000630920 ERICH6BQ5W0A0 696 aa9.64□□□□□ -0.87
CCAT2-201ENST00000630920 NECTIN2Q92692 538 aa9.64□□□□□ -0.87
CCAT2-201ENST00000630920 PRSS12P56730 875 aa9.63□□□□□ -0.87
CCAT2-201ENST00000630920 KHSRPQ92945 711 aaKnown RBP eCLIP9.63□□□□□ -0.87
CCAT2-201ENST00000630920 CDCA7LQ96GN5 454 aa9.63□□□□□ -0.87
CCAT2-201ENST00000630920 NUDT7P0C024 238 aa9.63□□□□□ -0.87
CCAT2-201ENST00000630920 FAM198AQ9UFP1 575 aa9.63□□□□□ -0.87
CCAT2-201ENST00000630920 PLSCR2Q9NRY7 297 aa9.61□□□□□ -0.87
CCAT2-201ENST00000630920 NEFLP07196 543 aa9.6□□□□□ -0.87
CCAT2-201ENST00000630920 BANK1Q8NDB2 785 aa9.6□□□□□ -0.87
CCAT2-201ENST00000630920 RBM46Q8TBY0 533 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms