RNA–Protein interactions for RNA: ENST00000629045.1

SCARNA4-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-201ENST00000629045 CDHR5Q9HBB8 845 aa6.12□□□□□ -1.43
SCARNA4-201ENST00000629045 DMRTA1Q5VZB9 504 aa6.11□□□□□ -1.43
SCARNA4-201ENST00000629045 FBXW7Q969H0 707 aa6.11□□□□□ -1.43
SCARNA4-201ENST00000629045 ARHGAP33O14559 1287 aa6.1□□□□□ -1.43
SCARNA4-201ENST00000629045 COL9A1P20849 921 aa6.1□□□□□ -1.43
SCARNA4-201ENST00000629045 PBX2P40425 430 aa6.1□□□□□ -1.43
SCARNA4-201ENST00000629045 LSM11P83369 360 aaKnown RBP eCLIP6.1□□□□□ -1.43
SCARNA4-201ENST00000629045 PTPREP23469 700 aa6.09□□□□□ -1.43
SCARNA4-201ENST00000629045 C6orf132Q5T0Z8 1188 aa6.09□□□□□ -1.43
SCARNA4-201ENST00000629045 RBM26Q5T8P6 1007 aaKnown RBP6.09□□□□□ -1.43
SCARNA4-201ENST00000629045 ANKRD13DQ6ZTN6 518 aa6.08□□□□□ -1.44
SCARNA4-201ENST00000629045 KCNH8Q96L42 1107 aa6.08□□□□□ -1.44
SCARNA4-201ENST00000629045 PPP1R3GB7ZBB8 358 aa6.07□□□□□ -1.44
SCARNA4-201ENST00000629045 PROX2Q3B8N5 592 aa6.07□□□□□ -1.44
SCARNA4-201ENST00000629045 NUTM2FA1L443 756 aa6.05□□□□□ -1.44
SCARNA4-201ENST00000629045 ADGRD1Q6QNK2 874 aa6.05□□□□□ -1.44
SCARNA4-201ENST00000629045 ZBED2Q9BTP6 218 aa6.05□□□□□ -1.44
SCARNA4-201ENST00000629045 PCDH10Q9P2E7 1040 aa6.05□□□□□ -1.44
SCARNA4-201ENST00000629045 SMYD5Q6GMV2 418 aa6.04□□□□□ -1.44
SCARNA4-201ENST00000629045 NPDC1Q9NQX5 325 aaPredicted RBP6.03□□□□□ -1.44
SCARNA4-201ENST00000629045 VPS9D1Q9Y2B5 631 aa6.03□□□□□ -1.44
SCARNA4-201ENST00000629045 GPR37O15354 613 aa6.02□□□□□ -1.45
SCARNA4-201ENST00000629045 PTGDRQ13258 359 aa6.02□□□□□ -1.45
SCARNA4-201ENST00000629045 LMOD2Q6P5Q4 547 aa6.02□□□□□ -1.45
SCARNA4-201ENST00000629045 FAM198AQ9UFP1 575 aa6.02□□□□□ -1.45
SCARNA4-201ENST00000629045 TK2O00142 265 aa6.01□□□□□ -1.45
SCARNA4-201ENST00000629045 TULP1O00294 542 aaPredicted RBP6.01□□□□□ -1.45
SCARNA4-201ENST00000629045 GPIHBP1Q8IV16 184 aa6.01□□□□□ -1.45
SCARNA4-201ENST00000629045 SPNS2Q8IVW8 549 aa6.01□□□□□ -1.45
SCARNA4-201ENST00000629045 CDCA7LQ96GN5 454 aa6.01□□□□□ -1.45
SCARNA4-201ENST00000629045 BCANQ96GW7 911 aa6.01□□□□□ -1.45
SCARNA4-201ENST00000629045 TSKSQ9UJT2 592 aa6.01□□□□□ -1.45
SCARNA4-201ENST00000629045 TRIM6-TRIM34B2RNG4 842 aa6□□□□□ -1.45
SCARNA4-201ENST00000629045 C3orf80F5H4A9 247 aa6□□□□□ -1.45
SCARNA4-201ENST00000629045 HRO43593 1189 aa6□□□□□ -1.45
SCARNA4-201ENST00000629045 PRSS12P56730 875 aa6□□□□□ -1.45
SCARNA4-201ENST00000629045 PADI6Q6TGC4 694 aa6□□□□□ -1.45
SCARNA4-201ENST00000629045 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6□□□□□ -1.45
SCARNA4-201ENST00000629045 FECHP22830 423 aa5.99□□□□□ -1.45
SCARNA4-201ENST00000629045 CERKQ8TCT0 537 aa5.99□□□□□ -1.45
SCARNA4-201ENST00000629045 SLC4A5Q9BY07 1137 aa5.99□□□□□ -1.45
SCARNA4-201ENST00000629045 KIAA1468Q9P260 1216 aa5.99□□□□□ -1.45
SCARNA4-201ENST00000629045 SEPT9Q9UHD8 586 aaPredicted RBP5.99□□□□□ -1.45
SCARNA4-201ENST00000629045 SMAPO00193 183 aa5.98□□□□□ -1.45
SCARNA4-201ENST00000629045 FCHSD2O94868 740 aa5.98□□□□□ -1.45
SCARNA4-201ENST00000629045 FAM161AQ3B820 660 aa5.98□□□□□ -1.45
SCARNA4-201ENST00000629045 RABGEF1Q9UJ41 708 aa5.98□□□□□ -1.45
SCARNA4-201ENST00000629045 PLSCR2Q9NRY7 297 aa5.97□□□□□ -1.45
SCARNA4-201ENST00000629045 BHMG1C9JSJ3 638 aaPredicted RBP5.96□□□□□ -1.46
SCARNA4-201ENST00000629045 HIC1Q14526 733 aa5.96□□□□□ -1.46
SCARNA4-201ENST00000629045 TTC13Q8NBP0 860 aa5.96□□□□□ -1.46
SCARNA4-201ENST00000629045 NBPF3Q9H094 633 aa5.96□□□□□ -1.46
SCARNA4-201ENST00000629045 RBM27Q9P2N5 1060 aaKnown RBP5.96□□□□□ -1.46
SCARNA4-201ENST00000629045 MYT1LQ9UL68 1186 aa5.96□□□□□ -1.46
SCARNA4-201ENST00000629045 GNPATO15228 680 aa5.95□□□□□ -1.46
SCARNA4-201ENST00000629045 MMRN1Q13201 1228 aa5.95□□□□□ -1.46
SCARNA4-201ENST00000629045 MRPL50Q8N5N7 158 aaKnown RBP5.95□□□□□ -1.46
SCARNA4-201ENST00000629045 PNMA3Q9UL41 463 aa5.95□□□□□ -1.46
SCARNA4-201ENST00000629045 NBPF26B4DH59 902 aa5.94□□□□□ -1.46
SCARNA4-201ENST00000629045 NUDT18Q6ZVK8 323 aa5.94□□□□□ -1.46
SCARNA4-201ENST00000629045 PACS2Q86VP3 889 aa5.94□□□□□ -1.46
SCARNA4-201ENST00000629045 ZC3H15Q8WU90 426 aaKnown RBP5.94□□□□□ -1.46
SCARNA4-201ENST00000629045 TATDN2Q93075 761 aa5.93□□□□□ -1.46
SCARNA4-201ENST00000629045 RNF166Q96A37 237 aaPredicted RBP5.93□□□□□ -1.46
SCARNA4-201ENST00000629045 KCTD12Q96CX2 325 aaKnown RBP5.93□□□□□ -1.46
SCARNA4-201ENST00000629045 STAC3Q96MF2 364 aa5.93□□□□□ -1.46
SCARNA4-201ENST00000629045 ADGRG1Q9Y653 693 aa5.93□□□□□ -1.46
SCARNA4-201ENST00000629045 ONECUT3O60422 494 aaPredicted RBP5.92□□□□□ -1.46
SCARNA4-201ENST00000629045 FAM98CQ17RN3 349 aaKnown RBP5.92□□□□□ -1.46
SCARNA4-201ENST00000629045 NLRP7Q8WX94 980 aa5.91□□□□□ -1.46
SCARNA4-201ENST00000629045 ZFRQ96KR1 1074 aaKnown RBP5.91□□□□□ -1.46
SCARNA4-201ENST00000629045 GOLGA8CPA6NN73 597 aa5.9□□□□□ -1.46
SCARNA4-201ENST00000629045 BCAMP50895 628 aa5.9□□□□□ -1.46
SCARNA4-201ENST00000629045 MAP2K5Q13163 448 aa5.9□□□□□ -1.46
SCARNA4-201ENST00000629045 LAPTM4BQ86VI4 370 aa5.9□□□□□ -1.46
SCARNA4-201ENST00000629045 WNT2BQ93097 391 aa5.9□□□□□ -1.46
SCARNA4-201ENST00000629045 EYA1Q99502 592 aa5.9□□□□□ -1.46
SCARNA4-201ENST00000629045 ZMYND10O75800 440 aa5.89□□□□□ -1.47
SCARNA4-201ENST00000629045 SAMD7Q7Z3H4 446 aa5.89□□□□□ -1.47
SCARNA4-201ENST00000629045 METTL3Q86U44 580 aaKnown RBP5.89□□□□□ -1.47
SCARNA4-201ENST00000629045 ANKK1Q8NFD2 765 aa5.89□□□□□ -1.47
SCARNA4-201ENST00000629045 PXYLP1Q8TE99 480 aa5.89□□□□□ -1.47
SCARNA4-201ENST00000629045 CCDC102AQ96A19 550 aa5.89□□□□□ -1.47
SCARNA4-201ENST00000629045 RNF40O75150 1001 aa5.88□□□□□ -1.47
SCARNA4-201ENST00000629045 THSD4Q6ZMP0 1018 aa5.88□□□□□ -1.47
SCARNA4-201ENST00000629045 RBM46Q8TBY0 533 aaKnown RBP5.88□□□□□ -1.47
SCARNA4-201ENST00000629045 PHOX2BQ99453 314 aa5.88□□□□□ -1.47
SCARNA4-201ENST00000629045 RCCD1A6NED2 376 aa5.87□□□□□ -1.47
SCARNA4-201ENST00000629045 PTPN5P54829 565 aa5.87□□□□□ -1.47
SCARNA4-201ENST00000629045 SWT1Q5T5J6 900 aaKnown RBP5.87□□□□□ -1.47
SCARNA4-201ENST00000629045 IRF6O14896 467 aa5.86□□□□□ -1.47
SCARNA4-201ENST00000629045 DNAJB2P25686 324 aa5.86□□□□□ -1.47
SCARNA4-201ENST00000629045 BARGINQ6ZT62 677 aa5.86□□□□□ -1.47
SCARNA4-201ENST00000629045 LRCH3Q96II8 777 aa5.86□□□□□ -1.47
SCARNA4-201ENST00000629045 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.86□□□□□ -1.47
SCARNA4-201ENST00000629045 MINK1Q8N4C8 1332 aaPredicted RBP5.85□□□□□ -1.47
SCARNA4-201ENST00000629045 SOWAHBA6NEL2 793 aa5.85□□□□□ -1.47
SCARNA4-201ENST00000629045 OATP04181 439 aa5.85□□□□□ -1.47
SCARNA4-201ENST00000629045 KRI1Q8N9T8 703 aaKnown RBP5.85□□□□□ -1.47
SCARNA4-201ENST00000629045 TMEM134Q9H6X4 195 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms