RNA–Protein interactions for RNA: ENST00000628078.2

TCF4-262, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-262ENST00000628078 RSPH4AQ5TD94 716 aa21.41■■□□□ 1.02
TCF4-262ENST00000628078 ILDR2Q71H61 639 aa21.4■■□□□ 1.02
TCF4-262ENST00000628078 DNMT1P26358 1616 aaKnown RBP21.4■■□□□ 1.02
TCF4-262ENST00000628078 LRRC9Q6ZRR7 1453 aa21.39■■□□□ 1.02
TCF4-262ENST00000628078 VPS8Q8N3P4 1428 aa21.39■■□□□ 1.02
TCF4-262ENST00000628078 TNRQ92752 1358 aa21.39■■□□□ 1.02
TCF4-262ENST00000628078 UBAP1LF5GYI3 381 aa21.39■■□□□ 1.01
TCF4-262ENST00000628078 A2ML1A8K2U0 1454 aa21.39■■□□□ 1.01
TCF4-262ENST00000628078 PLA2R1Q13018 1463 aa21.38■■□□□ 1.01
TCF4-262ENST00000628078 TCOF1Q13428 1488 aaKnown RBP21.38■■□□□ 1.01
TCF4-262ENST00000628078 KDM5DQ9BY66 1539 aa21.35■■□□□ 1.01
TCF4-262ENST00000628078 ARHGEF5Q12774 1597 aa21.34■■□□□ 1.01
TCF4-262ENST00000628078 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.34■■□□□ 1.01
TCF4-262ENST00000628078 PZPP20742 1482 aa21.32■■□□□ 1
TCF4-262ENST00000628078 IQSEC2Q5JU85 1478 aa21.32■■□□□ 1
TCF4-262ENST00000628078 CFAP65Q6ZU64 1925 aaKnown RBP21.31■■□□□ 1
TCF4-262ENST00000628078 SCAF1Q9H7N4 1312 aaKnown RBP21.3■■□□□ 1
TCF4-262ENST00000628078 MIA2Q96PC5 1412 aa21.3■■□□□ 1
TCF4-262ENST00000628078 ANKLE2Q86XL3 938 aa21.29■■□□□ 1
TCF4-262ENST00000628078 PIP4K2BP78356 416 aa21.28■■□□□ 1
TCF4-262ENST00000628078 THEMISQ8N1K5 641 aaPredicted RBP21.28■■□□□ 1
TCF4-262ENST00000628078 POLR1AO95602 1720 aaPredicted RBP21.28■■□□□ 1
TCF4-262ENST00000628078 NEURL4Q96JN8 1562 aa21.27■□□□□ 0.99
TCF4-262ENST00000628078 MYOM3Q5VTT5 1437 aa21.26■□□□□ 0.99
TCF4-262ENST00000628078 SPATA31D1Q6ZQQ2 1576 aa21.25■□□□□ 0.99
TCF4-262ENST00000628078 RRP7BPQ9NSQ0 103 aa21.25■□□□□ 0.99
TCF4-262ENST00000628078 UGGT1Q9NYU2 1555 aa21.24■□□□□ 0.99
TCF4-262ENST00000628078 MAST1Q9Y2H9 1570 aa21.23■□□□□ 0.99
TCF4-262ENST00000628078 APLP2Q06481 763 aa21.23■□□□□ 0.99
TCF4-262ENST00000628078 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.23■□□□□ 0.99
TCF4-262ENST00000628078 ABCC3O15438 1527 aa21.23■□□□□ 0.99
TCF4-262ENST00000628078 CEP152O94986 1710 aa21.22■□□□□ 0.99
TCF4-262ENST00000628078 SHANK2Q9UPX8 1470 aa21.21■□□□□ 0.99
TCF4-262ENST00000628078 SENP3Q9H4L4 574 aaPredicted RBP21.21■□□□□ 0.99
TCF4-262ENST00000628078 RNF17Q9BXT8 1623 aaKnown RBP21.21■□□□□ 0.99
TCF4-262ENST00000628078 NLRP1Q9C000 1473 aa21.2■□□□□ 0.98
TCF4-262ENST00000628078 MAP3K1Q13233 1512 aa21.2■□□□□ 0.98
TCF4-262ENST00000628078 FAM135AQ9P2D6 1515 aa21.2■□□□□ 0.98
TCF4-262ENST00000628078 CHIC2Q9UKJ5 165 aa21.19■□□□□ 0.98
TCF4-262ENST00000628078 NPHP4O75161 1426 aaPredicted RBP21.19■□□□□ 0.98
TCF4-262ENST00000628078 HSPA1LP34931 641 aa21.18■□□□□ 0.98
TCF4-262ENST00000628078 MROH1Q8NDA8 1641 aa21.18■□□□□ 0.98
TCF4-262ENST00000628078 SOCS7O14512 581 aa21.17■□□□□ 0.98
TCF4-262ENST00000628078 EIF2AK4Q9P2K8 1649 aaKnown RBP21.16■□□□□ 0.98
TCF4-262ENST00000628078 ERVK-7P63135 1459 aa21.16■□□□□ 0.98
TCF4-262ENST00000628078 ABCC5O15440 1437 aa21.16■□□□□ 0.98
TCF4-262ENST00000628078 TOM1O60784 492 aa21.16■□□□□ 0.98
TCF4-262ENST00000628078 ZC3H13Q5T200 1668 aaKnown RBP21.15■□□□□ 0.98
TCF4-262ENST00000628078 VWDEQ8N2E2 1590 aa21.15■□□□□ 0.98
TCF4-262ENST00000628078 DUOX2Q9NRD8 1548 aa21.15■□□□□ 0.98
TCF4-262ENST00000628078 KIF15Q9NS87 1388 aa21.15■□□□□ 0.98
TCF4-262ENST00000628078 PTPN23Q9H3S7 1636 aa21.15■□□□□ 0.98
TCF4-262ENST00000628078 CPS1P31327 1500 aa21.14■□□□□ 0.97
TCF4-262ENST00000628078 IQGAP1P46940 1657 aa21.12■□□□□ 0.97
TCF4-262ENST00000628078 MED14O60244 1454 aa21.12■□□□□ 0.97
TCF4-262ENST00000628078 DEPDC5O75140 1603 aa21.11■□□□□ 0.97
TCF4-262ENST00000628078 STRCP1A6NGW2 1772 aa21.1■□□□□ 0.97
TCF4-262ENST00000628078 CROCC2H7BZ55 1655 aa21.1■□□□□ 0.97
TCF4-262ENST00000628078 LTKP29376 864 aa21.1■□□□□ 0.97
TCF4-262ENST00000628078 TXNDC2Q86VQ3 553 aa21.1■□□□□ 0.97
TCF4-262ENST00000628078 DAPK1P53355 1430 aa21.1■□□□□ 0.97
TCF4-262ENST00000628078 UBR1Q8IWV7 1749 aa21.09■□□□□ 0.97
TCF4-262ENST00000628078 FGD6Q6ZV73 1430 aa21.06■□□□□ 0.96
TCF4-262ENST00000628078 STAG3Q9UJ98 1225 aa21.06■□□□□ 0.96
TCF4-262ENST00000628078 FAM50AQ14320 339 aaKnown RBP21.05■□□□□ 0.96
TCF4-262ENST00000628078 ERBINQ96RT1 1412 aa21.04■□□□□ 0.96
TCF4-262ENST00000628078 ALKQ9UM73 1620 aa21.03■□□□□ 0.96
TCF4-262ENST00000628078 PRDM15P57071 1507 aaPredicted RBP21.03■□□□□ 0.96
TCF4-262ENST00000628078 LRRC7Q96NW7 1537 aa21.03■□□□□ 0.96
TCF4-262ENST00000628078 SCAF11Q99590 1463 aaKnown RBP21.02■□□□□ 0.96
TCF4-262ENST00000628078 KANK1Q14678 1352 aa21.02■□□□□ 0.96
TCF4-262ENST00000628078 EID1Q9Y6B2 187 aa21.02■□□□□ 0.96
TCF4-262ENST00000628078 PIK3C2BO00750 1634 aa21.02■□□□□ 0.96
TCF4-262ENST00000628078 ANKRD30AQ9BXX3 1397 aa21.01■□□□□ 0.95
TCF4-262ENST00000628078 IDI1Q13907 227 aa21.01■□□□□ 0.95
TCF4-262ENST00000628078 ARHGAP31Q2M1Z3 1444 aa21■□□□□ 0.95
TCF4-262ENST00000628078 MED1Q15648 1581 aaPredicted RBP20.97■□□□□ 0.95
TCF4-262ENST00000628078 ARHGAP23Q9P227 1491 aa20.97■□□□□ 0.95
TCF4-262ENST00000628078 RBM33Q96EV2 1170 aaKnown RBP20.97■□□□□ 0.95
TCF4-262ENST00000628078 SLIT1O75093 1534 aa20.96■□□□□ 0.95
TCF4-262ENST00000628078 SLC26A8Q96RN1 970 aa20.96■□□□□ 0.95
TCF4-262ENST00000628078 TMEM2Q9UHN6 1383 aa20.95■□□□□ 0.94
TCF4-262ENST00000628078 BCANQ96GW7 911 aa20.94■□□□□ 0.94
TCF4-262ENST00000628078 PHF23Q9BUL5 403 aaPredicted RBP20.92■□□□□ 0.94
TCF4-262ENST00000628078 SYNMO15061 1565 aa20.92■□□□□ 0.94
TCF4-262ENST00000628078 XIRP1Q702N8 1843 aaKnown RBP20.92■□□□□ 0.94
TCF4-262ENST00000628078 PPARGC1BQ86YN6 1023 aaKnown RBP20.91■□□□□ 0.94
TCF4-262ENST00000628078 EFCAB6Q5THR3 1501 aa20.9■□□□□ 0.94
TCF4-262ENST00000628078 LMTK2Q8IWU2 1503 aa20.88■□□□□ 0.93
TCF4-262ENST00000628078 PROSER2Q86WR7 435 aaPredicted RBP20.87■□□□□ 0.93
TCF4-262ENST00000628078 ANKRD50Q9ULJ7 1429 aa20.87■□□□□ 0.93
TCF4-262ENST00000628078 CHGAP10645 457 aaKnown RBP20.86■□□□□ 0.93
TCF4-262ENST00000628078 ITGAEP38570 1179 aa20.86■□□□□ 0.93
TCF4-262ENST00000628078 ADGRL2O95490 1459 aa20.86■□□□□ 0.93
TCF4-262ENST00000628078 NOS1P29475 1434 aa20.86■□□□□ 0.93
TCF4-262ENST00000628078 TMEM94Q12767 1356 aa20.85■□□□□ 0.93
TCF4-262ENST00000628078 KCNA6P17658 529 aa20.84■□□□□ 0.93
TCF4-262ENST00000628078 NUTM2DQ5VT03 806 aaPredicted RBP20.84■□□□□ 0.93
TCF4-262ENST00000628078 MYO5BQ9ULV0 1848 aa20.83■□□□□ 0.93
TCF4-262ENST00000628078 SLC52A1Q9NWF4 448 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms