RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 PDCD7Q8N8D1 485 aaKnown RBP4.91□□□□□ -1.62
SCN8A-210ENST00000627665 OXER1Q8TDS5 423 aa4.91□□□□□ -1.62
SCN8A-210ENST00000627665 EPAS1Q99814 870 aa4.91□□□□□ -1.62
SCN8A-210ENST00000627665 SEC24BO95487 1268 aa4.9□□□□□ -1.63
SCN8A-210ENST00000627665 PTGDRQ13258 359 aa4.9□□□□□ -1.63
SCN8A-210ENST00000627665 IRX5P78411 483 aaPredicted RBP4.89□□□□□ -1.63
SCN8A-210ENST00000627665 DIXDC1Q155Q3 683 aa4.89□□□□□ -1.63
SCN8A-210ENST00000627665 SH3D19Q5HYK7 790 aa4.89□□□□□ -1.63
SCN8A-210ENST00000627665 GPCPD1Q9NPB8 672 aa4.89□□□□□ -1.63
SCN8A-210ENST00000627665 TRAK2O60296 914 aa4.88□□□□□ -1.63
SCN8A-210ENST00000627665 OATP04181 439 aa4.88□□□□□ -1.63
SCN8A-210ENST00000627665 SKIV2LQ15477 1246 aaKnown RBP4.88□□□□□ -1.63
SCN8A-210ENST00000627665 WWC1Q8IX03 1113 aa4.88□□□□□ -1.63
SCN8A-210ENST00000627665 MAP3K7O43318 606 aa4.87□□□□□ -1.63
SCN8A-210ENST00000627665 GALR2O43603 387 aaPredicted RBP4.87□□□□□ -1.63
SCN8A-210ENST00000627665 PHF14O94880 888 aa4.87□□□□□ -1.63
SCN8A-210ENST00000627665 ATN1P54259 1190 aaPredicted RBP4.87□□□□□ -1.63
SCN8A-210ENST00000627665 CERKQ8TCT0 537 aa4.87□□□□□ -1.63
SCN8A-210ENST00000627665 CCDC97Q96F63 343 aaPredicted RBP4.87□□□□□ -1.63
SCN8A-210ENST00000627665 ARID3CA6NKF2 412 aa4.86□□□□□ -1.63
SCN8A-210ENST00000627665 ATMINO43313 823 aaPredicted RBP4.86□□□□□ -1.63
SCN8A-210ENST00000627665 FECHP22830 423 aa4.86□□□□□ -1.63
SCN8A-210ENST00000627665 SSTR3P32745 418 aaPredicted RBP4.86□□□□□ -1.63
SCN8A-210ENST00000627665 ASTLQ6HA08 431 aaPredicted RBP4.86□□□□□ -1.63
SCN8A-210ENST00000627665 C3orf67Q6ZVT6 689 aa4.86□□□□□ -1.63
SCN8A-210ENST00000627665 PTCD2Q8WV60 388 aaKnown RBP4.86□□□□□ -1.63
SCN8A-210ENST00000627665 FBXW7Q969H0 707 aa4.86□□□□□ -1.63
SCN8A-210ENST00000627665 PRM3Q9NNZ6 103 aa4.86□□□□□ -1.63
SCN8A-210ENST00000627665 SERPINA10Q9UK55 444 aa4.86□□□□□ -1.63
SCN8A-210ENST00000627665 MS4A1P11836 297 aa4.85□□□□□ -1.63
SCN8A-210ENST00000627665 MDM2Q00987 491 aaPredicted RBP4.85□□□□□ -1.63
SCN8A-210ENST00000627665 EN1Q05925 392 aaPredicted RBP4.85□□□□□ -1.63
SCN8A-210ENST00000627665 TRIM26Q12899 539 aaPredicted RBP4.85□□□□□ -1.63
SCN8A-210ENST00000627665 ANO8Q9HCE9 1232 aaPredicted RBP4.85□□□□□ -1.63
SCN8A-210ENST00000627665 SLC34A2O95436 690 aa4.84□□□□□ -1.63
SCN8A-210ENST00000627665 PDE4CQ08493 712 aa4.84□□□□□ -1.63
SCN8A-210ENST00000627665 TYW1BQ6NUM6 668 aa4.84□□□□□ -1.63
SCN8A-210ENST00000627665 PROSER2Q86WR7 435 aaPredicted RBP4.84□□□□□ -1.63
SCN8A-210ENST00000627665 SLAIN1Q8ND83 568 aa4.84□□□□□ -1.63
SCN8A-210ENST00000627665 CCDC9Q9Y3X0 531 aaKnown RBP4.84□□□□□ -1.63
SCN8A-210ENST00000627665 ONECUT3O60422 494 aaPredicted RBP4.83□□□□□ -1.64
SCN8A-210ENST00000627665 MCM6Q14566 821 aa4.83□□□□□ -1.64
SCN8A-210ENST00000627665 CLUAP1Q96AJ1 413 aa4.83□□□□□ -1.64
SCN8A-210ENST00000627665 BEGAINQ9BUH8 593 aa4.83□□□□□ -1.64
SCN8A-210ENST00000627665 C1orf115Q9H7X2 142 aa4.83□□□□□ -1.64
SCN8A-210ENST00000627665 DCAF1Q9Y4B6 1507 aa4.82□□□□□ -1.64
SCN8A-210ENST00000627665 SPDYE5A6NIY4 337 aa4.82□□□□□ -1.64
SCN8A-210ENST00000627665 TMEM259Q4ZIN3 620 aa4.82□□□□□ -1.64
SCN8A-210ENST00000627665 CCDC82Q8N4S0 544 aa4.82□□□□□ -1.64
SCN8A-210ENST00000627665 BANK1Q8NDB2 785 aa4.82□□□□□ -1.64
SCN8A-210ENST00000627665 RBM33Q96EV2 1170 aaKnown RBP4.82□□□□□ -1.64
SCN8A-210ENST00000627665 DCBLD2Q96PD2 775 aa4.82□□□□□ -1.64
SCN8A-210ENST00000627665 TMUB1Q9BVT8 246 aa4.82□□□□□ -1.64
SCN8A-210ENST00000627665 NESP48681 1621 aa4.82□□□□□ -1.64
SCN8A-210ENST00000627665 NPM2Q86SE8 214 aaKnown RBP4.81□□□□□ -1.64
SCN8A-210ENST00000627665 KCTD17Q8N5Z5 321 aa4.81□□□□□ -1.64
SCN8A-210ENST00000627665 SLC39A7Q92504 469 aa4.81□□□□□ -1.64
SCN8A-210ENST00000627665 THOC2Q8NI27 1593 aaKnown RBP4.81□□□□□ -1.64
SCN8A-210ENST00000627665 NCAPD3P42695 1498 aa4.81□□□□□ -1.64
SCN8A-210ENST00000627665 ZCCHC6Q5VYS8 1495 aaKnown RBP4.81□□□□□ -1.64
SCN8A-210ENST00000627665 C7P10643 843 aa4.8□□□□□ -1.64
SCN8A-210ENST00000627665 RBM46Q8TBY0 533 aaKnown RBP4.8□□□□□ -1.64
SCN8A-210ENST00000627665 FAM217BQ9NTX9 383 aaPredicted RBP4.8□□□□□ -1.64
SCN8A-210ENST00000627665 POLR3EQ9NVU0 708 aa4.8□□□□□ -1.64
SCN8A-210ENST00000627665 RBM27Q9P2N5 1060 aaKnown RBP4.8□□□□□ -1.64
SCN8A-210ENST00000627665 ZNF777Q9ULD5 760 aaPredicted RBP4.8□□□□□ -1.64
SCN8A-210ENST00000627665 ACIN1Q9UKV3 1341 aaKnown RBP4.79□□□□□ -1.64
SCN8A-210ENST00000627665 CLK2P49760 499 aaKnown RBP4.79□□□□□ -1.64
SCN8A-210ENST00000627665 METTL3Q86U44 580 aaKnown RBP4.79□□□□□ -1.64
SCN8A-210ENST00000627665 SULF1Q8IWU6 871 aa4.79□□□□□ -1.64
SCN8A-210ENST00000627665 JPH4Q96JJ6 628 aa4.79□□□□□ -1.64
SCN8A-210ENST00000627665 REPIN1Q9BWE0 567 aaKnown RBP4.79□□□□□ -1.64
SCN8A-210ENST00000627665 NPDC1Q9NQX5 325 aaPredicted RBP4.79□□□□□ -1.64
SCN8A-210ENST00000627665 HRCP23327 699 aa4.78□□□□□ -1.64
SCN8A-210ENST00000627665 PRIM1P49642 420 aaKnown RBP4.78□□□□□ -1.64
SCN8A-210ENST00000627665 TMEM92Q6UXU6 159 aa4.78□□□□□ -1.64
SCN8A-210ENST00000627665 CDHR5Q9HBB8 845 aa4.78□□□□□ -1.64
SCN8A-210ENST00000627665 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.78□□□□□ -1.64
SCN8A-210ENST00000627665 PCDH10Q9P2E7 1040 aa4.78□□□□□ -1.64
SCN8A-210ENST00000627665 ZNF330Q9Y3S2 320 aaPredicted RBP4.78□□□□□ -1.64
SCN8A-210ENST00000627665 PCDHGA10Q9Y5H3 936 aa4.78□□□□□ -1.64
SCN8A-210ENST00000627665 SMARCA2P51531 1590 aa4.78□□□□□ -1.64
SCN8A-210ENST00000627665 PATL2C9JE40 543 aaKnown RBP4.77□□□□□ -1.65
SCN8A-210ENST00000627665 RSPH4AQ5TD94 716 aa4.77□□□□□ -1.65
SCN8A-210ENST00000627665 MYSM1Q5VVJ2 828 aa4.77□□□□□ -1.65
SCN8A-210ENST00000627665 NUTM1Q86Y26 1132 aa4.77□□□□□ -1.65
SCN8A-210ENST00000627665 PROCA1Q8NCQ7 364 aaPredicted RBP4.77□□□□□ -1.65
SCN8A-210ENST00000627665 PXYLP1Q8TE99 480 aa4.77□□□□□ -1.65
SCN8A-210ENST00000627665 ZDHHC16Q969W1 377 aa4.77□□□□□ -1.65
SCN8A-210ENST00000627665 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.76□□□□□ -1.65
SCN8A-210ENST00000627665 RIMBP2O15034 1052 aa4.76□□□□□ -1.65
SCN8A-210ENST00000627665 PPP1R15AO75807 674 aaPredicted RBP4.76□□□□□ -1.65
SCN8A-210ENST00000627665 RFC5P40937 340 aa4.76□□□□□ -1.65
SCN8A-210ENST00000627665 TSR1Q2NL82 804 aaKnown RBP4.76□□□□□ -1.65
SCN8A-210ENST00000627665 C6orf132Q5T0Z8 1188 aa4.76□□□□□ -1.65
SCN8A-210ENST00000627665 PADI6Q6TGC4 694 aa4.76□□□□□ -1.65
SCN8A-210ENST00000627665 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.76□□□□□ -1.65
SCN8A-210ENST00000627665 TRAIPQ9BWF2 469 aa4.76□□□□□ -1.65
SCN8A-210ENST00000627665 TBC1D2Q9BYX2 928 aa4.76□□□□□ -1.65
SCN8A-210ENST00000627665 PCDHGA4Q9Y5G9 962 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms