RNA–Protein interactions for RNA: ENST00000626584.2

TCF4-254, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 1,701 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-254ENST00000626584 ZBED9Q6R2W3 1325 aa13.78□□□□□ -0.2
TCF4-254ENST00000626584 SYCP2Q9BX26 1530 aa13.77□□□□□ -0.2
TCF4-254ENST00000626584 IQGAP3Q86VI3 1631 aa13.77□□□□□ -0.21
TCF4-254ENST00000626584 MRS2Q9HD23 443 aa13.76□□□□□ -0.21
TCF4-254ENST00000626584 E9PCH4 1651 aa13.76□□□□□ -0.21
TCF4-254ENST00000626584 ARHGAP5Q13017 1502 aa13.76□□□□□ -0.21
TCF4-254ENST00000626584 LAMC1P11047 1609 aa13.75□□□□□ -0.21
TCF4-254ENST00000626584 TRPM1Q7Z4N2 1603 aa13.74□□□□□ -0.21
TCF4-254ENST00000626584 UHRF1BP1LA0JNW5 1464 aa13.74□□□□□ -0.21
TCF4-254ENST00000626584 MAGI2Q86UL8 1455 aa13.74□□□□□ -0.21
TCF4-254ENST00000626584 DUOX2Q9NRD8 1548 aa13.73□□□□□ -0.21
TCF4-254ENST00000626584 ERCC6L2Q5T890 1561 aa13.73□□□□□ -0.21
TCF4-254ENST00000626584 CLASP1Q7Z460 1538 aa13.72□□□□□ -0.21
TCF4-254ENST00000626584 ATP10AO60312 1499 aa13.72□□□□□ -0.21
TCF4-254ENST00000626584 KTN1Q86UP2 1357 aaKnown RBP13.71□□□□□ -0.21
TCF4-254ENST00000626584 CARD11Q9BXL7 1154 aa13.71□□□□□ -0.21
TCF4-254ENST00000626584 ZCCHC11Q5TAX3 1644 aaKnown RBP13.71□□□□□ -0.21
TCF4-254ENST00000626584 PRAG1Q86YV5 1406 aa13.71□□□□□ -0.21
TCF4-254ENST00000626584 FAM9BQ8IZU0 186 aa13.7□□□□□ -0.22
TCF4-254ENST00000626584 ERBINQ96RT1 1412 aa13.7□□□□□ -0.22
TCF4-254ENST00000626584 GPRASP1Q5JY77 1395 aa13.7□□□□□ -0.22
TCF4-254ENST00000626584 PLA2R1Q13018 1463 aa13.7□□□□□ -0.22
TCF4-254ENST00000626584 CCDC144AA2RUR9 1427 aa13.7□□□□□ -0.22
TCF4-254ENST00000626584 PLCH2O75038 1416 aa13.7□□□□□ -0.22
TCF4-254ENST00000626584 ZNF326Q5BKZ1 582 aaKnown RBP13.7□□□□□ -0.22
TCF4-254ENST00000626584 AMER1Q5JTC6 1135 aaPredicted RBP13.7□□□□□ -0.22
TCF4-254ENST00000626584 ARXQ96QS3 562 aa13.69□□□□□ -0.22
TCF4-254ENST00000626584 EIF2AK4Q9P2K8 1649 aaKnown RBP13.69□□□□□ -0.22
TCF4-254ENST00000626584 ARAP3Q8WWN8 1544 aa13.68□□□□□ -0.22
TCF4-254ENST00000626584 SMG6Q86US8 1419 aaKnown RBP13.68□□□□□ -0.22
TCF4-254ENST00000626584 ABCC1P33527 1531 aa13.68□□□□□ -0.22
TCF4-254ENST00000626584 DCAF11Q8TEB1 546 aa13.67□□□□□ -0.22
TCF4-254ENST00000626584 PRDM15P57071 1507 aaPredicted RBP13.66□□□□□ -0.22
TCF4-254ENST00000626584 A2MP01023 1474 aa13.66□□□□□ -0.22
TCF4-254ENST00000626584 PPP4R2Q9NY27 417 aa13.66□□□□□ -0.22
TCF4-254ENST00000626584 ST20-MTHFSA0A0A6YYL1 179 aa13.64□□□□□ -0.23
TCF4-254ENST00000626584 BRD4O60885 1362 aaPredicted RBP13.64□□□□□ -0.23
TCF4-254ENST00000626584 KDM2AQ9Y2K7 1162 aa13.64□□□□□ -0.23
TCF4-254ENST00000626584 RNF17Q9BXT8 1623 aaKnown RBP13.63□□□□□ -0.23
TCF4-254ENST00000626584 LRPPRCP42704 1394 aaKnown RBP13.63□□□□□ -0.23
TCF4-254ENST00000626584 RTEL1-TNFRSF6BF6WH68 1400 aa13.63□□□□□ -0.23
TCF4-254ENST00000626584 RALBP1Q15311 655 aa13.63□□□□□ -0.23
TCF4-254ENST00000626584 RBM19Q9Y4C8 960 aaKnown RBP13.63□□□□□ -0.23
TCF4-254ENST00000626584 EFCAB2Q5VUJ9 269 aa13.62□□□□□ -0.23
TCF4-254ENST00000626584 PNISRQ8TF01 805 aaKnown RBP13.62□□□□□ -0.23
TCF4-254ENST00000626584 COL17A1Q9UMD9 1497 aaPredicted RBP13.62□□□□□ -0.23
TCF4-254ENST00000626584 RNF123Q5XPI4 1314 aa13.61□□□□□ -0.23
TCF4-254ENST00000626584 MYBBP1AQ9BQG0 1328 aaKnown RBP13.61□□□□□ -0.23
TCF4-254ENST00000626584 POLR3GLQ9BT43 218 aa13.6□□□□□ -0.23
TCF4-254ENST00000626584 NUDCQ9Y266 331 aa13.6□□□□□ -0.23
TCF4-254ENST00000626584 DEPDC5O75140 1603 aa13.59□□□□□ -0.23
TCF4-254ENST00000626584 IRX6P78412 446 aaPredicted RBP13.59□□□□□ -0.23
TCF4-254ENST00000626584 TRAPPC8Q9Y2L5 1435 aa13.58□□□□□ -0.23
TCF4-254ENST00000626584 WASHC2CQ9Y4E1 1318 aa13.58□□□□□ -0.24
TCF4-254ENST00000626584 PARD3Q8TEW0 1356 aa13.58□□□□□ -0.24
TCF4-254ENST00000626584 ZFYVE16Q7Z3T8 1539 aa13.58□□□□□ -0.24
TCF4-254ENST00000626584 TRPM2O94759 1503 aa13.57□□□□□ -0.24
TCF4-254ENST00000626584 CEP152O94986 1710 aa13.57□□□□□ -0.24
TCF4-254ENST00000626584 INSRP06213 1382 aa13.57□□□□□ -0.24
TCF4-254ENST00000626584 ZMYM4Q5VZL5 1548 aa13.57□□□□□ -0.24
TCF4-254ENST00000626584 TMC1Q8TDI8 760 aa13.57□□□□□ -0.24
TCF4-254ENST00000626584 ABCA9Q8IUA7 1624 aa13.56□□□□□ -0.24
TCF4-254ENST00000626584 SPHKAPQ2M3C7 1700 aa13.56□□□□□ -0.24
TCF4-254ENST00000626584 NEURL4Q96JN8 1562 aa13.56□□□□□ -0.24
TCF4-254ENST00000626584 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.56□□□□□ -0.24
TCF4-254ENST00000626584 ANP32EQ9BTT0 268 aa13.56□□□□□ -0.24
TCF4-254ENST00000626584 IQGAP1P46940 1657 aa13.55□□□□□ -0.24
TCF4-254ENST00000626584 MADDQ8WXG6 1647 aa13.55□□□□□ -0.24
TCF4-254ENST00000626584 VWDEQ8N2E2 1590 aa13.55□□□□□ -0.24
TCF4-254ENST00000626584 INO80Q9ULG1 1556 aaPredicted RBP13.55□□□□□ -0.24
TCF4-254ENST00000626584 PTPRTO14522 1441 aa13.55□□□□□ -0.24
TCF4-254ENST00000626584 NBPF1Q3BBV0 1214 aa13.55□□□□□ -0.24
TCF4-254ENST00000626584 STAC3Q96MF2 364 aa13.55□□□□□ -0.24
TCF4-254ENST00000626584 TESK2Q96S53 571 aa13.55□□□□□ -0.24
TCF4-254ENST00000626584 TET3O43151 1660 aa13.55□□□□□ -0.24
TCF4-254ENST00000626584 PER1O15534 1290 aaPredicted RBP13.54□□□□□ -0.24
TCF4-254ENST00000626584 FANCIQ9NVI1 1328 aa13.53□□□□□ -0.24
TCF4-254ENST00000626584 RGL3Q3MIN7 710 aa13.53□□□□□ -0.24
TCF4-254ENST00000626584 NLRP13Q86W25 1043 aa13.53□□□□□ -0.24
TCF4-254ENST00000626584 WDR7Q9Y4E6 1490 aa13.53□□□□□ -0.24
TCF4-254ENST00000626584 SPAG9O60271 1321 aaKnown RBP13.52□□□□□ -0.25
TCF4-254ENST00000626584 KIAA1210Q9ULL0 1709 aa13.52□□□□□ -0.25
TCF4-254ENST00000626584 DISP3Q9P2K9 1392 aa13.52□□□□□ -0.25
TCF4-254ENST00000626584 SCAPERQ9BY12 1400 aa13.51□□□□□ -0.25
TCF4-254ENST00000626584 ATP7AQ04656 1500 aa13.51□□□□□ -0.25
TCF4-254ENST00000626584 CLTCL1P53675 1640 aa13.51□□□□□ -0.25
TCF4-254ENST00000626584 TMF1P82094 1093 aa13.49□□□□□ -0.25
TCF4-254ENST00000626584 PDE3BQ13370 1112 aa13.47□□□□□ -0.25
TCF4-254ENST00000626584 FANCAO15360 1455 aa13.47□□□□□ -0.25
TCF4-254ENST00000626584 MROH1Q8NDA8 1641 aa13.47□□□□□ -0.25
TCF4-254ENST00000626584 BLMP54132 1417 aaPredicted RBP13.46□□□□□ -0.25
TCF4-254ENST00000626584 CNGB1Q14028 1251 aaPredicted RBP13.46□□□□□ -0.25
TCF4-254ENST00000626584 B4GALNT3Q6L9W6 998 aa13.46□□□□□ -0.25
TCF4-254ENST00000626584 SYNMO15061 1565 aa13.46□□□□□ -0.26
TCF4-254ENST00000626584 SCAF11Q99590 1463 aaKnown RBP13.46□□□□□ -0.26
TCF4-254ENST00000626584 KANK1Q14678 1352 aa13.45□□□□□ -0.26
TCF4-254ENST00000626584 AFAP1Q8N556 730 aa13.44□□□□□ -0.26
TCF4-254ENST00000626584 PANK3Q9H999 370 aa13.43□□□□□ -0.26
TCF4-254ENST00000626584 MYOM2P54296 1465 aa13.43□□□□□ -0.26
TCF4-254ENST00000626584 IFT172Q9UG01 1749 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms