RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 IRF6O14896 467 aa8.7□□□□□ -1.02
CDR1-202ENST00000625883 PDE4DQ08499 809 aa8.7□□□□□ -1.02
CDR1-202ENST00000625883 GTF3C3Q9Y5Q9 886 aa8.7□□□□□ -1.02
CDR1-202ENST00000625883 JPH4Q96JJ6 628 aa8.69□□□□□ -1.02
CDR1-202ENST00000625883 NPDC1Q9NQX5 325 aaPredicted RBP8.69□□□□□ -1.02
CDR1-202ENST00000625883 KHSRPQ92945 711 aaKnown RBP eCLIP8.68□□□□□ -1.02
CDR1-202ENST00000625883 RBM33Q96EV2 1170 aaKnown RBP8.68□□□□□ -1.02
CDR1-202ENST00000625883 MAP3K7O43318 606 aa8.67□□□□□ -1.02
CDR1-202ENST00000625883 FOSBP53539 338 aa8.67□□□□□ -1.02
CDR1-202ENST00000625883 TSR1Q2NL82 804 aaKnown RBP8.67□□□□□ -1.02
CDR1-202ENST00000625883 TYW1BQ6NUM6 668 aa8.67□□□□□ -1.02
CDR1-202ENST00000625883 NUDT7P0C024 238 aa8.66□□□□□ -1.02
CDR1-202ENST00000625883 KDM4CQ9H3R0 1056 aa8.66□□□□□ -1.02
CDR1-202ENST00000625883 ERBB3P21860 1342 aa8.66□□□□□ -1.02
CDR1-202ENST00000625883 MARVELD3Q96A59 401 aa8.65□□□□□ -1.02
CDR1-202ENST00000625883 AMHR2Q16671 573 aa8.64□□□□□ -1.03
CDR1-202ENST00000625883 FBXW7Q969H0 707 aa8.64□□□□□ -1.03
CDR1-202ENST00000625883 LCE2DQ5TA82 110 aaPredicted RBP8.64□□□□□ -1.03
CDR1-202ENST00000625883 POTEMA6NI47 508 aa8.63□□□□□ -1.03
CDR1-202ENST00000625883 POTEGQ6S5H5 508 aa8.63□□□□□ -1.03
CDR1-202ENST00000625883 FAM205CA6NFA0 338 aa8.62□□□□□ -1.03
CDR1-202ENST00000625883 PARP9Q8IXQ6 854 aa8.62□□□□□ -1.03
CDR1-202ENST00000625883 ZNF454Q8N9F8 522 aa8.62□□□□□ -1.03
CDR1-202ENST00000625883 ZDHHC16Q969W1 377 aa8.61□□□□□ -1.03
CDR1-202ENST00000625883 C6orf132Q5T0Z8 1188 aa8.6□□□□□ -1.03
CDR1-202ENST00000625883 ADAM33Q9BZ11 813 aa8.6□□□□□ -1.03
CDR1-202ENST00000625883 PCDH10Q9P2E7 1040 aa8.6□□□□□ -1.03
CDR1-202ENST00000625883 TIMELESSQ9UNS1 1208 aa8.6□□□□□ -1.03
CDR1-202ENST00000625883 LHX6Q9UPM6 363 aa8.6□□□□□ -1.03
CDR1-202ENST00000625883 PPP4R3BQ5MIZ7 849 aa8.59□□□□□ -1.03
CDR1-202ENST00000625883 IL27Q8NEV9 243 aa8.59□□□□□ -1.03
CDR1-202ENST00000625883 VARS2Q5ST30 1063 aaKnown RBP8.58□□□□□ -1.04
CDR1-202ENST00000625883 KCNH8Q96L42 1107 aa8.58□□□□□ -1.04
CDR1-202ENST00000625883 HS3ST6Q96QI5 342 aa8.58□□□□□ -1.04
CDR1-202ENST00000625883 FAM117AQ9C073 453 aa8.57□□□□□ -1.04
CDR1-202ENST00000625883 PHOX2BQ99453 314 aa8.57□□□□□ -1.04
CDR1-202ENST00000625883 PADI6Q6TGC4 694 aa8.56□□□□□ -1.04
CDR1-202ENST00000625883 CERKQ8TCT0 537 aa8.56□□□□□ -1.04
CDR1-202ENST00000625883 REPIN1Q9BWE0 567 aaKnown RBP8.56□□□□□ -1.04
CDR1-202ENST00000625883 PBX2P40425 430 aa8.55□□□□□ -1.04
CDR1-202ENST00000625883 ZNF687Q8N1G0 1237 aa8.55□□□□□ -1.04
CDR1-202ENST00000625883 TTC13Q8NBP0 860 aa8.55□□□□□ -1.04
CDR1-202ENST00000625883 PLEKHG3A1L390 1219 aa8.54□□□□□ -1.04
CDR1-202ENST00000625883 TTLL12Q14166 644 aaPredicted RBP8.54□□□□□ -1.04
CDR1-202ENST00000625883 FAM161AQ3B820 660 aa8.54□□□□□ -1.04
CDR1-202ENST00000625883 TMUB1Q9BVT8 246 aa8.54□□□□□ -1.04
CDR1-202ENST00000625883 GIGYF2Q6Y7W6 1299 aaKnown RBP8.53□□□□□ -1.04
CDR1-202ENST00000625883 RBM27Q9P2N5 1060 aaKnown RBP8.53□□□□□ -1.04
CDR1-202ENST00000625883 DAXXQ9UER7 740 aaPredicted RBP8.53□□□□□ -1.04
CDR1-202ENST00000625883 ADGRG1Q9Y653 693 aa8.52□□□□□ -1.05
CDR1-202ENST00000625883 MS4A1P11836 297 aa8.51□□□□□ -1.05
CDR1-202ENST00000625883 COL9A1P20849 921 aa8.51□□□□□ -1.05
CDR1-202ENST00000625883 METTL3Q86U44 580 aaKnown RBP8.51□□□□□ -1.05
CDR1-202ENST00000625883 CDAN1Q8IWY9 1227 aa8.51□□□□□ -1.05
CDR1-202ENST00000625883 DDRGK1Q96HY6 314 aa8.51□□□□□ -1.05
CDR1-202ENST00000625883 BCL2L12Q9HB09 334 aa8.51□□□□□ -1.05
CDR1-202ENST00000625883 PRSS12P56730 875 aa8.51□□□□□ -1.05
CDR1-202ENST00000625883 MDM2Q00987 491 aaPredicted RBP8.51□□□□□ -1.05
CDR1-202ENST00000625883 PXYLP1Q8TE99 480 aa8.5□□□□□ -1.05
CDR1-202ENST00000625883 CDCA7LQ96GN5 454 aa8.5□□□□□ -1.05
CDR1-202ENST00000625883 FAM198AQ9UFP1 575 aa8.5□□□□□ -1.05
CDR1-202ENST00000625883 OATP04181 439 aa8.49□□□□□ -1.05
CDR1-202ENST00000625883 PTPREP23469 700 aa8.49□□□□□ -1.05
CDR1-202ENST00000625883 CLCN1P35523 988 aa8.49□□□□□ -1.05
CDR1-202ENST00000625883 NLRP7Q8WX94 980 aa8.49□□□□□ -1.05
CDR1-202ENST00000625883 GPCPD1Q9NPB8 672 aa8.49□□□□□ -1.05
CDR1-202ENST00000625883 ARHGAP33O14559 1287 aa8.48□□□□□ -1.05
CDR1-202ENST00000625883 PPP1R3GB7ZBB8 358 aa8.47□□□□□ -1.05
CDR1-202ENST00000625883 ERICH6Q7L0X2 663 aa8.46□□□□□ -1.05
CDR1-202ENST00000625883 POTEB3A0JP26 581 aa8.45□□□□□ -1.06
CDR1-202ENST00000625883 POTEBQ6S5H4 581 aa8.45□□□□□ -1.06
CDR1-202ENST00000625883 TSKSQ9UJT2 592 aa8.45□□□□□ -1.06
CDR1-202ENST00000625883 C3orf80F5H4A9 247 aa8.45□□□□□ -1.06
CDR1-202ENST00000625883 C14orf37Q86TY3 774 aa8.45□□□□□ -1.06
CDR1-202ENST00000625883 SSTR3P32745 418 aaPredicted RBP8.44□□□□□ -1.06
CDR1-202ENST00000625883 KCNK17Q96T54 332 aa8.44□□□□□ -1.06
CDR1-202ENST00000625883 FAM217BQ9NTX9 383 aaPredicted RBP8.44□□□□□ -1.06
CDR1-202ENST00000625883 RBM46Q8TBY0 533 aaKnown RBP8.43□□□□□ -1.06
CDR1-202ENST00000625883 EYA1Q99502 592 aa8.43□□□□□ -1.06
CDR1-202ENST00000625883 GOPCQ9HD26 462 aa8.42□□□□□ -1.06
CDR1-202ENST00000625883 TRIM6-TRIM34B2RNG4 842 aa8.41□□□□□ -1.06
CDR1-202ENST00000625883 LSM11P83369 360 aaKnown RBP eCLIP8.41□□□□□ -1.06
CDR1-202ENST00000625883 RCCD1A6NED2 376 aa8.4□□□□□ -1.06
CDR1-202ENST00000625883 PROX2Q3B8N5 592 aa8.4□□□□□ -1.06
CDR1-202ENST00000625883 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.39□□□□□ -1.07
CDR1-202ENST00000625883 TK2O00142 265 aa8.39□□□□□ -1.07
CDR1-202ENST00000625883 NUDT18Q6ZVK8 323 aa8.39□□□□□ -1.07
CDR1-202ENST00000625883 BEGAINQ9BUH8 593 aa8.39□□□□□ -1.07
CDR1-202ENST00000625883 SH3D19Q5HYK7 790 aa8.38□□□□□ -1.07
CDR1-202ENST00000625883 POTEEQ6S8J3 1075 aa8.38□□□□□ -1.07
CDR1-202ENST00000625883 ANKRD13DQ6ZTN6 518 aa8.38□□□□□ -1.07
CDR1-202ENST00000625883 STAC3Q96MF2 364 aa8.38□□□□□ -1.07
CDR1-202ENST00000625883 SLC4A5Q9BY07 1137 aa8.38□□□□□ -1.07
CDR1-202ENST00000625883 AXIN2Q9Y2T1 843 aa8.38□□□□□ -1.07
CDR1-202ENST00000625883 NBPF26B4DH59 902 aa8.38□□□□□ -1.07
CDR1-202ENST00000625883 PSEN2P49810 448 aa8.38□□□□□ -1.07
CDR1-202ENST00000625883 TATDN2Q93075 761 aa8.38□□□□□ -1.07
CDR1-202ENST00000625883 ZBED2Q9BTP6 218 aa8.38□□□□□ -1.07
CDR1-202ENST00000625883 KRTAP3-3Q9BYR6 98 aa8.38□□□□□ -1.07
CDR1-202ENST00000625883 KRTAP3-2Q9BYR7 98 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms