RNA–Protein interactions for RNA: ENST00000623788.1

ERCC6-212, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 4

Gene ERCC6, Length 562 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-212ENST00000623788 UPF1Q92900 1129 aaKnown RBP eCLIP9.64□□□□□ -0.87
ERCC6-212ENST00000623788 KDM4FA0A1W2PPD8 638 aa9.62□□□□□ -0.87
ERCC6-212ENST00000623788 HRO43593 1189 aa9.62□□□□□ -0.87
ERCC6-212ENST00000623788 PSEN2P49810 448 aa9.61□□□□□ -0.87
ERCC6-212ENST00000623788 ANO8Q9HCE9 1232 aaPredicted RBP9.61□□□□□ -0.87
ERCC6-212ENST00000623788 ZMYND10O75800 440 aa9.6□□□□□ -0.87
ERCC6-212ENST00000623788 DMRTA1Q5VZB9 504 aa9.6□□□□□ -0.87
ERCC6-212ENST00000623788 KCTD12Q96CX2 325 aaKnown RBP9.6□□□□□ -0.87
ERCC6-212ENST00000623788 EVI5O60447 810 aa9.59□□□□□ -0.87
ERCC6-212ENST00000623788 RBM26Q5T8P6 1007 aaKnown RBP9.59□□□□□ -0.87
ERCC6-212ENST00000623788 GPR37O15354 613 aa9.57□□□□□ -0.88
ERCC6-212ENST00000623788 OSBPP22059 807 aa9.57□□□□□ -0.88
ERCC6-212ENST00000623788 GPIHBP1Q8IV16 184 aa9.56□□□□□ -0.88
ERCC6-212ENST00000623788 KCNK17Q96T54 332 aa9.56□□□□□ -0.88
ERCC6-212ENST00000623788 BARGINQ6ZT62 677 aa9.55□□□□□ -0.88
ERCC6-212ENST00000623788 GRXCR2A6NFK2 248 aa9.52□□□□□ -0.89
ERCC6-212ENST00000623788 RGS20O76081 388 aa9.51□□□□□ -0.89
ERCC6-212ENST00000623788 PHF14O94880 888 aa9.51□□□□□ -0.89
ERCC6-212ENST00000623788 PRIM1P49642 420 aaKnown RBP9.51□□□□□ -0.89
ERCC6-212ENST00000623788 DDX12PQ92771 950 aa9.51□□□□□ -0.89
ERCC6-212ENST00000623788 VPS9D1Q9Y2B5 631 aa9.51□□□□□ -0.89
ERCC6-212ENST00000623788 PTPN5P54829 565 aa9.5□□□□□ -0.89
ERCC6-212ENST00000623788 EPAS1Q99814 870 aa9.5□□□□□ -0.89
ERCC6-212ENST00000623788 GOLGA8CPA6NN73 597 aa9.49□□□□□ -0.89
ERCC6-212ENST00000623788 ZNF454Q8N9F8 522 aa9.49□□□□□ -0.89
ERCC6-212ENST00000623788 SLC4A5Q9BY07 1137 aa9.49□□□□□ -0.89
ERCC6-212ENST00000623788 SLC24A3Q9HC58 644 aa9.48□□□□□ -0.89
ERCC6-212ENST00000623788 PTPREP23469 700 aa9.47□□□□□ -0.89
ERCC6-212ENST00000623788 EN1Q05925 392 aaPredicted RBP9.47□□□□□ -0.89
ERCC6-212ENST00000623788 JPH4Q96JJ6 628 aa9.47□□□□□ -0.89
ERCC6-212ENST00000623788 BCL2L12Q9HB09 334 aa9.47□□□□□ -0.89
ERCC6-212ENST00000623788 IFFO2Q5TF58 517 aa9.46□□□□□ -0.9
ERCC6-212ENST00000623788 PCDHGA10Q9Y5H3 936 aa9.46□□□□□ -0.9
ERCC6-212ENST00000623788 FOSBP53539 338 aa9.45□□□□□ -0.9
ERCC6-212ENST00000623788 FCHSD2O94868 740 aa9.43□□□□□ -0.9
ERCC6-212ENST00000623788 PTGDRQ13258 359 aa9.43□□□□□ -0.9
ERCC6-212ENST00000623788 HIC1Q14526 733 aa9.43□□□□□ -0.9
ERCC6-212ENST00000623788 TYW1BQ6NUM6 668 aa9.43□□□□□ -0.9
ERCC6-212ENST00000623788 MRPL50Q8N5N7 158 aaKnown RBP9.43□□□□□ -0.9
ERCC6-212ENST00000623788 FBXW7Q969H0 707 aa9.43□□□□□ -0.9
ERCC6-212ENST00000623788 NUTM2FA1L443 756 aa9.42□□□□□ -0.9
ERCC6-212ENST00000623788 GNPATO15228 680 aa9.42□□□□□ -0.9
ERCC6-212ENST00000623788 BRPF1P55201 1214 aaPredicted RBP9.42□□□□□ -0.9
ERCC6-212ENST00000623788 THSD4Q6ZMP0 1018 aa9.42□□□□□ -0.9
ERCC6-212ENST00000623788 WNT2BQ93097 391 aa9.42□□□□□ -0.9
ERCC6-212ENST00000623788 AK7Q96M32 723 aa9.42□□□□□ -0.9
ERCC6-212ENST00000623788 BHMG1C9JSJ3 638 aaPredicted RBP9.41□□□□□ -0.9
ERCC6-212ENST00000623788 MAP2K5Q13163 448 aa9.41□□□□□ -0.9
ERCC6-212ENST00000623788 NBPF3Q9H094 633 aa9.41□□□□□ -0.9
ERCC6-212ENST00000623788 MINK1Q8N4C8 1332 aaPredicted RBP9.4□□□□□ -0.9
ERCC6-212ENST00000623788 IRX2Q9BZI1 471 aaPredicted RBP9.4□□□□□ -0.9
ERCC6-212ENST00000623788 NPDC1Q9NQX5 325 aaPredicted RBP9.4□□□□□ -0.9
ERCC6-212ENST00000623788 ZBED2Q9BTP6 218 aa9.39□□□□□ -0.91
ERCC6-212ENST00000623788 ZDHHC16Q969W1 377 aa9.38□□□□□ -0.91
ERCC6-212ENST00000623788 CDHR5Q9HBB8 845 aa9.38□□□□□ -0.91
ERCC6-212ENST00000623788 MAP3K7O43318 606 aa9.37□□□□□ -0.91
ERCC6-212ENST00000623788 A0A0G2JS52 829 aa9.36□□□□□ -0.91
ERCC6-212ENST00000623788 IRF6O14896 467 aa9.36□□□□□ -0.91
ERCC6-212ENST00000623788 TRIM66O15016 1216 aa9.36□□□□□ -0.91
ERCC6-212ENST00000623788 FECHP22830 423 aa9.35□□□□□ -0.91
ERCC6-212ENST00000623788 TSR1Q2NL82 804 aaKnown RBP9.35□□□□□ -0.91
ERCC6-212ENST00000623788 KRI1Q8N9T8 703 aaKnown RBP9.35□□□□□ -0.91
ERCC6-212ENST00000623788 CCDC102AQ96A19 550 aa9.35□□□□□ -0.91
ERCC6-212ENST00000623788 TMEM132AQ24JP5 1023 aa9.34□□□□□ -0.91
ERCC6-212ENST00000623788 CERKQ8TCT0 537 aa9.34□□□□□ -0.91
ERCC6-212ENST00000623788 ADAM33Q9BZ11 813 aa9.34□□□□□ -0.91
ERCC6-212ENST00000623788 AMHR2Q16671 573 aa9.33□□□□□ -0.92
ERCC6-212ENST00000623788 C6orf132Q5T0Z8 1188 aa9.33□□□□□ -0.92
ERCC6-212ENST00000623788 RBM33Q96EV2 1170 aaKnown RBP9.33□□□□□ -0.92
ERCC6-212ENST00000623788 RBM27Q9P2N5 1060 aaKnown RBP9.33□□□□□ -0.92
ERCC6-212ENST00000623788 NEUROD2Q15784 382 aa9.32□□□□□ -0.92
ERCC6-212ENST00000623788 PDE4DQ08499 809 aa9.31□□□□□ -0.92
ERCC6-212ENST00000623788 TTC13Q8NBP0 860 aa9.31□□□□□ -0.92
ERCC6-212ENST00000623788 ANKK1Q8NFD2 765 aa9.31□□□□□ -0.92
ERCC6-212ENST00000623788 RABGEF1Q9UJ41 708 aa9.29□□□□□ -0.92
ERCC6-212ENST00000623788 PPP1R3GB7ZBB8 358 aa9.28□□□□□ -0.92
ERCC6-212ENST00000623788 NYAP1Q6ZVC0 841 aa9.27□□□□□ -0.93
ERCC6-212ENST00000623788 LAPTM4BQ86VI4 370 aa9.26□□□□□ -0.93
ERCC6-212ENST00000623788 KDM4CQ9H3R0 1056 aa9.25□□□□□ -0.93
ERCC6-212ENST00000623788 GPBP1L1Q9HC44 474 aaPredicted RBP9.25□□□□□ -0.93
ERCC6-212ENST00000623788 ITGBL1O95965 494 aaPredicted RBP9.24□□□□□ -0.93
ERCC6-212ENST00000623788 PRSS12P56730 875 aa9.24□□□□□ -0.93
ERCC6-212ENST00000623788 PADI6Q6TGC4 694 aa9.24□□□□□ -0.93
ERCC6-212ENST00000623788 PARP9Q8IXQ6 854 aa9.24□□□□□ -0.93
ERCC6-212ENST00000623788 TMUB1Q9BVT8 246 aa9.24□□□□□ -0.93
ERCC6-212ENST00000623788 COL9A1P20849 921 aa9.23□□□□□ -0.93
ERCC6-212ENST00000623788 ADGRG1Q9Y653 693 aa9.23□□□□□ -0.93
ERCC6-212ENST00000623788 DAXXQ9UER7 740 aaPredicted RBP9.22□□□□□ -0.93
ERCC6-212ENST00000623788 SOWAHBA6NEL2 793 aa9.21□□□□□ -0.94
ERCC6-212ENST00000623788 ONECUT3O60422 494 aaPredicted RBP9.21□□□□□ -0.94
ERCC6-212ENST00000623788 PROX2Q3B8N5 592 aa9.21□□□□□ -0.94
ERCC6-212ENST00000623788 METTL3Q86U44 580 aaKnown RBP9.21□□□□□ -0.94
ERCC6-212ENST00000623788 CDCA7LQ96GN5 454 aa9.21□□□□□ -0.94
ERCC6-212ENST00000623788 OATP04181 439 aa9.2□□□□□ -0.94
ERCC6-212ENST00000623788 KCNC4Q03721 635 aa9.2□□□□□ -0.94
ERCC6-212ENST00000623788 PXYLP1Q8TE99 480 aa9.2□□□□□ -0.94
ERCC6-212ENST00000623788 PHOX2BQ99453 314 aa9.2□□□□□ -0.94
ERCC6-212ENST00000623788 FAM198AQ9UFP1 575 aa9.2□□□□□ -0.94
ERCC6-212ENST00000623788 BCAMP50895 628 aa9.19□□□□□ -0.94
ERCC6-212ENST00000623788 Q6ZNB5 142 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms