RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 WASHC2CQ9Y4E1 1318 aa20.28■□□□□ 0.84
ATRX-208ENST00000622960 ZNF142P52746 1687 aaPredicted RBP20.27■□□□□ 0.84
ATRX-208ENST00000622960 DUOX2Q9NRD8 1548 aa20.27■□□□□ 0.83
ATRX-208ENST00000622960 PTPRKQ15262 1439 aa20.27■□□□□ 0.83
ATRX-208ENST00000622960 RNF17Q9BXT8 1623 aaKnown RBP20.26■□□□□ 0.83
ATRX-208ENST00000622960 ZC3H13Q5T200 1668 aaKnown RBP20.26■□□□□ 0.83
ATRX-208ENST00000622960 DNMT1P26358 1616 aaKnown RBP20.25■□□□□ 0.83
ATRX-208ENST00000622960 CEP170BQ9Y4F5 1589 aaPredicted RBP20.25■□□□□ 0.83
ATRX-208ENST00000622960 TCOF1Q13428 1488 aaKnown RBP20.24■□□□□ 0.83
ATRX-208ENST00000622960 STRCQ7RTU9 1775 aa20.24■□□□□ 0.83
ATRX-208ENST00000622960 PZPP20742 1482 aa20.24■□□□□ 0.83
ATRX-208ENST00000622960 DAPK1P53355 1430 aa20.23■□□□□ 0.83
ATRX-208ENST00000622960 CAMSAP1Q5T5Y3 1602 aa20.23■□□□□ 0.83
ATRX-208ENST00000622960 KIF15Q9NS87 1388 aa20.22■□□□□ 0.83
ATRX-208ENST00000622960 FBXO41Q8TF61 875 aa20.22■□□□□ 0.83
ATRX-208ENST00000622960 ABCC5O15440 1437 aa20.21■□□□□ 0.83
ATRX-208ENST00000622960 NCOA1Q15788 1441 aa20.21■□□□□ 0.83
ATRX-208ENST00000622960 PTPRTO14522 1441 aa20.2■□□□□ 0.82
ATRX-208ENST00000622960 ERBINQ96RT1 1412 aa20.2■□□□□ 0.82
ATRX-208ENST00000622960 TNRQ92752 1358 aa20.2■□□□□ 0.82
ATRX-208ENST00000622960 ANKRD30AQ9BXX3 1397 aa20.19■□□□□ 0.82
ATRX-208ENST00000622960 A2ML1A8K2U0 1454 aa20.18■□□□□ 0.82
ATRX-208ENST00000622960 PLA2R1Q13018 1463 aa20.18■□□□□ 0.82
ATRX-208ENST00000622960 FAM50AQ14320 339 aaKnown RBP20.17■□□□□ 0.82
ATRX-208ENST00000622960 ABCC3O15438 1527 aa20.17■□□□□ 0.82
ATRX-208ENST00000622960 RRP7BPQ9NSQ0 103 aa20.16■□□□□ 0.82
ATRX-208ENST00000622960 KANK1Q14678 1352 aa20.15■□□□□ 0.82
ATRX-208ENST00000622960 PRDM15P57071 1507 aaPredicted RBP20.14■□□□□ 0.81
ATRX-208ENST00000622960 NLRP1Q9C000 1473 aa20.14■□□□□ 0.81
ATRX-208ENST00000622960 PKD2Q13563 968 aa20.14■□□□□ 0.81
ATRX-208ENST00000622960 CERKQ8TCT0 537 aa20.14■□□□□ 0.81
ATRX-208ENST00000622960 CEP152O94986 1710 aa20.13■□□□□ 0.81
ATRX-208ENST00000622960 FBXO31Q5XUX0 539 aaPredicted RBP20.12■□□□□ 0.81
ATRX-208ENST00000622960 CHIC2Q9UKJ5 165 aa20.12■□□□□ 0.81
ATRX-208ENST00000622960 MROH1Q8NDA8 1641 aa20.12■□□□□ 0.81
ATRX-208ENST00000622960 DEPDC5O75140 1603 aa20.09■□□□□ 0.81
ATRX-208ENST00000622960 UGGT1Q9NYU2 1555 aa20.08■□□□□ 0.81
ATRX-208ENST00000622960 NCKAP5LQ9HCH0 1330 aa20.08■□□□□ 0.81
ATRX-208ENST00000622960 POLR1AO95602 1720 aaPredicted RBP20.08■□□□□ 0.81
ATRX-208ENST00000622960 ADGRL2O95490 1459 aa20.08■□□□□ 0.81
ATRX-208ENST00000622960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.08■□□□□ 0.813e-11■■■■□ 23
ATRX-208ENST00000622960 SPATA31D1Q6ZQQ2 1576 aa20.08■□□□□ 0.8
ATRX-208ENST00000622960 ERVK-7P63135 1459 aa20.07■□□□□ 0.8
ATRX-208ENST00000622960 THEMISQ8N1K5 641 aaPredicted RBP20.06■□□□□ 0.8
ATRX-208ENST00000622960 ARHGAP31Q2M1Z3 1444 aa20.03■□□□□ 0.8
ATRX-208ENST00000622960 ANKLE2Q86XL3 938 aa20.01■□□□□ 0.79
ATRX-208ENST00000622960 ANKRD50Q9ULJ7 1429 aa20.01■□□□□ 0.79
ATRX-208ENST00000622960 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20■□□□□ 0.79
ATRX-208ENST00000622960 IQSEC2Q5JU85 1478 aa19.99■□□□□ 0.79
ATRX-208ENST00000622960 LMTK2Q8IWU2 1503 aa19.99■□□□□ 0.79
ATRX-208ENST00000622960 LTBP4Q8N2S1 1624 aa19.98■□□□□ 0.79
ATRX-208ENST00000622960 CFAP65Q6ZU64 1925 aaKnown RBP19.97■□□□□ 0.79
ATRX-208ENST00000622960 EFCAB6Q5THR3 1501 aa19.96■□□□□ 0.79
ATRX-208ENST00000622960 ROCK1Q13464 1354 aa19.95■□□□□ 0.79
ATRX-208ENST00000622960 VWDEQ8N2E2 1590 aa19.95■□□□□ 0.78
ATRX-208ENST00000622960 NEURL4Q96JN8 1562 aa19.95■□□□□ 0.78
ATRX-208ENST00000622960 PPARGC1BQ86YN6 1023 aaKnown RBP19.95■□□□□ 0.78
ATRX-208ENST00000622960 STAG3Q9UJ98 1225 aa19.95■□□□□ 0.78
ATRX-208ENST00000622960 ZNF335Q9H4Z2 1342 aaPredicted RBP19.95■□□□□ 0.78
ATRX-208ENST00000622960 UBR1Q8IWV7 1749 aa19.94■□□□□ 0.78
ATRX-208ENST00000622960 NPHP4O75161 1426 aaPredicted RBP19.93■□□□□ 0.78
ATRX-208ENST00000622960 ITGAEP38570 1179 aa19.93■□□□□ 0.78
ATRX-208ENST00000622960 IQGAP1P46940 1657 aa19.93■□□□□ 0.78
ATRX-208ENST00000622960 MED14O60244 1454 aa19.91■□□□□ 0.78
ATRX-208ENST00000622960 UNC13BO14795 1591 aa19.91■□□□□ 0.78
ATRX-208ENST00000622960 RPRD2Q5VT52 1461 aaKnown RBP19.9■□□□□ 0.78
ATRX-208ENST00000622960 CPS1P31327 1500 aa19.9■□□□□ 0.78
ATRX-208ENST00000622960 PIK3C2BO00750 1634 aa19.9■□□□□ 0.78
ATRX-208ENST00000622960 TET3O43151 1660 aa19.9■□□□□ 0.78
ATRX-208ENST00000622960 SCAF11Q99590 1463 aaKnown RBP19.89■□□□□ 0.77
ATRX-208ENST00000622960 EID1Q9Y6B2 187 aa19.89■□□□□ 0.77
ATRX-208ENST00000622960 KDM5AP29375 1690 aaKnown RBP19.88■□□□□ 0.77
ATRX-208ENST00000622960 GCC2Q8IWJ2 1684 aa19.88■□□□□ 0.77
ATRX-208ENST00000622960 SLIT1O75093 1534 aa19.86■□□□□ 0.77
ATRX-208ENST00000622960 SYNMO15061 1565 aa19.85■□□□□ 0.77
ATRX-208ENST00000622960 ARHGAP23Q9P227 1491 aa19.84■□□□□ 0.77
ATRX-208ENST00000622960 NOS1P29475 1434 aa19.84■□□□□ 0.77
ATRX-208ENST00000622960 ADGRB3O60242 1522 aa19.83■□□□□ 0.77
ATRX-208ENST00000622960 TXNDC2Q86VQ3 553 aa19.83■□□□□ 0.77
ATRX-208ENST00000622960 SLC52A1Q9NWF4 448 aa19.83■□□□□ 0.77
ATRX-208ENST00000622960 RRBP1Q9P2E9 1410 aaKnown RBP19.83■□□□□ 0.76
ATRX-208ENST00000622960 IQGAP3Q86VI3 1631 aa19.83■□□□□ 0.76
ATRX-208ENST00000622960 UBAP1LF5GYI3 381 aa19.81■□□□□ 0.76
ATRX-208ENST00000622960 TMEM2Q9UHN6 1383 aa19.81■□□□□ 0.76
ATRX-208ENST00000622960 IDI1Q13907 227 aa19.8■□□□□ 0.76
ATRX-208ENST00000622960 NUP155O75694 1391 aa19.8■□□□□ 0.76
ATRX-208ENST00000622960 E9PCH4 1651 aa19.77■□□□□ 0.76
ATRX-208ENST00000622960 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
ATRX-208ENST00000622960 TOM1O60784 492 aa19.75■□□□□ 0.75
ATRX-208ENST00000622960 LTKP29376 864 aa19.75■□□□□ 0.75
ATRX-208ENST00000622960 HDGFP51858 240 aaKnown RBP19.75■□□□□ 0.75
ATRX-208ENST00000622960 PPP1R15AO75807 674 aaPredicted RBP19.74■□□□□ 0.75
ATRX-208ENST00000622960 BCANQ96GW7 911 aa19.74■□□□□ 0.75
ATRX-208ENST00000622960 CHGAP10645 457 aaKnown RBP19.72■□□□□ 0.75
ATRX-208ENST00000622960 TMEM131LA2VDJ0 1609 aa19.69■□□□□ 0.74
ATRX-208ENST00000622960 LRRC7Q96NW7 1537 aa19.68■□□□□ 0.74
ATRX-208ENST00000622960 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.68■□□□□ 0.74
ATRX-208ENST00000622960 SPHKAPQ2M3C7 1700 aa19.68■□□□□ 0.74
ATRX-208ENST00000622960 NAIPQ13075 1403 aa19.68■□□□□ 0.74
ATRX-208ENST00000622960 RIMS2Q9UQ26 1411 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms