RNA–Protein interactions for RNA: ENST00000622494.1

RPRD1B-209, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 3

Gene RPRD1B, Length 469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-209ENST00000622494 G3V3G9 751 aa8.47□□□□□ -1.05
RPRD1B-209ENST00000622494 CRISPLD2Q9H0B8 497 aa8.47□□□□□ -1.05
RPRD1B-209ENST00000622494 NCKAP5LQ9HCH0 1330 aa8.46□□□□□ -1.06
RPRD1B-209ENST00000622494 KIAA0556O60303 1618 aa8.46□□□□□ -1.06
RPRD1B-209ENST00000622494 ABCC2Q92887 1545 aa8.45□□□□□ -1.06
RPRD1B-209ENST00000622494 DIP2BQ9P265 1576 aa8.45□□□□□ -1.06
RPRD1B-209ENST00000622494 KIF3CO14782 793 aa8.45□□□□□ -1.06
RPRD1B-209ENST00000622494 TMEM92Q6UXU6 159 aa8.45□□□□□ -1.06
RPRD1B-209ENST00000622494 VSIG10Q8N0Z9 540 aa8.45□□□□□ -1.06
RPRD1B-209ENST00000622494 PRXQ9BXM0 1461 aa8.44□□□□□ -1.06
RPRD1B-209ENST00000622494 RANGAP1P46060 587 aaPredicted RBP8.43□□□□□ -1.06
RPRD1B-209ENST00000622494 MFSD10Q14728 455 aa8.43□□□□□ -1.06
RPRD1B-209ENST00000622494 LHX8Q68G74 356 aa8.43□□□□□ -1.06
RPRD1B-209ENST00000622494 MAMSTRQ6ZN01 415 aa8.43□□□□□ -1.06
RPRD1B-209ENST00000622494 C3orf67Q6ZVT6 689 aa8.43□□□□□ -1.06
RPRD1B-209ENST00000622494 KDM2AQ9Y2K7 1162 aa8.43□□□□□ -1.06
RPRD1B-209ENST00000622494 PTPRGP23470 1445 aa8.43□□□□□ -1.06
RPRD1B-209ENST00000622494 UGGT2Q9NYU1 1516 aa8.43□□□□□ -1.06
RPRD1B-209ENST00000622494 ARID3CA6NKF2 412 aa8.42□□□□□ -1.06
RPRD1B-209ENST00000622494 P3H3Q8IVL6 736 aa8.42□□□□□ -1.06
RPRD1B-209ENST00000622494 GPHNQ9NQX3 736 aaPredicted RBP8.42□□□□□ -1.06
RPRD1B-209ENST00000622494 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.42□□□□□ -1.06
RPRD1B-209ENST00000622494 ZCCHC11Q5TAX3 1644 aaKnown RBP8.41□□□□□ -1.06
RPRD1B-209ENST00000622494 PLB1Q6P1J6 1458 aa8.41□□□□□ -1.06
RPRD1B-209ENST00000622494 TNIKQ9UKE5 1360 aa8.41□□□□□ -1.06
RPRD1B-209ENST00000622494 PDE4AP27815 886 aa8.41□□□□□ -1.06
RPRD1B-209ENST00000622494 PPRC1Q5VV67 1664 aaKnown RBP8.4□□□□□ -1.06
RPRD1B-209ENST00000622494 MAPKBP1O60336 1514 aa8.4□□□□□ -1.06
RPRD1B-209ENST00000622494 FAM69CQ0P6D2 419 aa8.4□□□□□ -1.06
RPRD1B-209ENST00000622494 SCUBE2Q9NQ36 999 aa8.4□□□□□ -1.06
RPRD1B-209ENST00000622494 ABCC10Q5T3U5 1492 aa8.39□□□□□ -1.07
RPRD1B-209ENST00000622494 C2orf72A6NCS6 295 aa8.39□□□□□ -1.07
RPRD1B-209ENST00000622494 OTUD5Q96G74 571 aa8.39□□□□□ -1.07
RPRD1B-209ENST00000622494 CARMIL2Q6F5E8 1435 aa8.38□□□□□ -1.07
RPRD1B-209ENST00000622494 FOXK1P85037 733 aa8.38□□□□□ -1.07
RPRD1B-209ENST00000622494 TMC2Q8TDI7 906 aa8.38□□□□□ -1.07
RPRD1B-209ENST00000622494 ASXL2Q76L83 1435 aa8.37□□□□□ -1.07
RPRD1B-209ENST00000622494 UACAQ9BZF9 1416 aa8.37□□□□□ -1.07
RPRD1B-209ENST00000622494 ABCA8O94911 1581 aa8.36□□□□□ -1.07
RPRD1B-209ENST00000622494 DDX27Q96GQ7 796 aaKnown RBP8.36□□□□□ -1.07
RPRD1B-209ENST00000622494 LARP6Q9BRS8 491 aaKnown RBP8.36□□□□□ -1.07
RPRD1B-209ENST00000622494 SAMD9Q5K651 1589 aa8.35□□□□□ -1.07
RPRD1B-209ENST00000622494 DSG2Q14126 1118 aa8.35□□□□□ -1.07
RPRD1B-209ENST00000622494 UHRF1BP1LA0JNW5 1464 aa8.34□□□□□ -1.07
RPRD1B-209ENST00000622494 PPP1R15BQ5SWA1 713 aa8.34□□□□□ -1.07
RPRD1B-209ENST00000622494 SLAIN1Q8ND83 568 aa8.34□□□□□ -1.07
RPRD1B-209ENST00000622494 FHOD3Q2V2M9 1422 aa8.34□□□□□ -1.07
RPRD1B-209ENST00000622494 KDM5BQ9UGL1 1544 aa8.34□□□□□ -1.08
RPRD1B-209ENST00000622494 CAMK2BQ13554 666 aa8.33□□□□□ -1.08
RPRD1B-209ENST00000622494 EPRSP07814 1512 aaKnown RBP8.33□□□□□ -1.08
RPRD1B-209ENST00000622494 KDM6BO15054 1643 aa8.32□□□□□ -1.08
RPRD1B-209ENST00000622494 COL17A1Q9UMD9 1497 aaPredicted RBP8.32□□□□□ -1.08
RPRD1B-209ENST00000622494 KIF21BO75037 1637 aa8.32□□□□□ -1.08
RPRD1B-209ENST00000622494 MAP3K4Q9Y6R4 1608 aa8.32□□□□□ -1.08
RPRD1B-209ENST00000622494 PLPP6Q8IY26 295 aa8.31□□□□□ -1.08
RPRD1B-209ENST00000622494 WDR70Q9NW82 654 aa8.31□□□□□ -1.08
RPRD1B-209ENST00000622494 GLI2P10070 1586 aa8.3□□□□□ -1.08
RPRD1B-209ENST00000622494 RAPGEF6Q8TEU7 1601 aa8.29□□□□□ -1.08
RPRD1B-209ENST00000622494 KCNH8Q96L42 1107 aa8.29□□□□□ -1.08
RPRD1B-209ENST00000622494 GOLGA3Q08378 1498 aa8.29□□□□□ -1.08
RPRD1B-209ENST00000622494 ATP10BO94823 1461 aa8.28□□□□□ -1.08
RPRD1B-209ENST00000622494 WDR7Q9Y4E6 1490 aa8.28□□□□□ -1.08
RPRD1B-209ENST00000622494 SLC34A2O95436 690 aa8.28□□□□□ -1.08
RPRD1B-209ENST00000622494 E2F4Q16254 413 aa8.28□□□□□ -1.08
RPRD1B-209ENST00000622494 ARIH1Q9Y4X5 557 aaPredicted RBP8.28□□□□□ -1.08
RPRD1B-209ENST00000622494 LRRIQ1Q96JM4 1722 aa8.28□□□□□ -1.08
RPRD1B-209ENST00000622494 NUP153P49790 1475 aaKnown RBP8.27□□□□□ -1.09
RPRD1B-209ENST00000622494 HOXB3P14651 431 aaPredicted RBP8.27□□□□□ -1.09
RPRD1B-209ENST00000622494 CDK13Q14004 1512 aaKnown RBP8.27□□□□□ -1.09
RPRD1B-209ENST00000622494 KCNV2Q8TDN2 545 aa8.26□□□□□ -1.09
RPRD1B-209ENST00000622494 EMILIN3Q9NT22 766 aa8.26□□□□□ -1.09
RPRD1B-209ENST00000622494 EEA1Q15075 1411 aa8.26□□□□□ -1.09
RPRD1B-209ENST00000622494 OXER1Q8TDS5 423 aa8.24□□□□□ -1.09
RPRD1B-209ENST00000622494 PTCD2Q8WV60 388 aaKnown RBP8.24□□□□□ -1.09
RPRD1B-209ENST00000622494 ARHGAP35Q9NRY4 1499 aa8.24□□□□□ -1.09
RPRD1B-209ENST00000622494 CFAP43Q8NDM7 1665 aa8.24□□□□□ -1.09
RPRD1B-209ENST00000622494 KDM4FA0A1W2PPD8 638 aa8.23□□□□□ -1.09
RPRD1B-209ENST00000622494 UBTFP17480 764 aaKnown RBP8.23□□□□□ -1.09
RPRD1B-209ENST00000622494 TTC37Q6PGP7 1564 aa8.22□□□□□ -1.09
RPRD1B-209ENST00000622494 DOK7Q18PE1 504 aa8.22□□□□□ -1.09
RPRD1B-209ENST00000622494 ARHGEF1Q92888 912 aaKnown RBP8.22□□□□□ -1.09
RPRD1B-209ENST00000622494 CD109Q6YHK3 1445 aa8.21□□□□□ -1.09
RPRD1B-209ENST00000622494 SNPHO15079 494 aa8.21□□□□□ -1.1
RPRD1B-209ENST00000622494 KIF14Q15058 1648 aa8.21□□□□□ -1.1
RPRD1B-209ENST00000622494 ABCA9Q8IUA7 1624 aa8.21□□□□□ -1.1
RPRD1B-209ENST00000622494 EFCAB5A4FU69 1503 aa8.2□□□□□ -1.1
RPRD1B-209ENST00000622494 PCF11O94913 1555 aaKnown RBP8.2□□□□□ -1.1
RPRD1B-209ENST00000622494 ZSWIM6Q9HCJ5 1215 aa8.2□□□□□ -1.1
RPRD1B-209ENST00000622494 FRMPD1Q5SYB0 1578 aa8.19□□□□□ -1.1
RPRD1B-209ENST00000622494 ATP1B4Q9UN42 357 aaPredicted RBP8.19□□□□□ -1.1
RPRD1B-209ENST00000622494 SIGLEC1Q9BZZ2 1709 aa8.19□□□□□ -1.1
RPRD1B-209ENST00000622494 ADGRL1O94910 1474 aa8.19□□□□□ -1.1
RPRD1B-209ENST00000622494 GPR153Q6NV75 609 aa8.18□□□□□ -1.1
RPRD1B-209ENST00000622494 PCDHGA4Q9Y5G9 962 aa8.18□□□□□ -1.1
RPRD1B-209ENST00000622494 MAGI3Q5TCQ9 1506 aa8.18□□□□□ -1.1
RPRD1B-209ENST00000622494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.18□□□□□ -1.1
RPRD1B-209ENST00000622494 DPYSL4O14531 572 aa8.16□□□□□ -1.1
RPRD1B-209ENST00000622494 RIMBP2O15034 1052 aa8.16□□□□□ -1.1
RPRD1B-209ENST00000622494 RAPGEF3O95398 923 aa8.16□□□□□ -1.1
RPRD1B-209ENST00000622494 PDIA6Q15084 440 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms