RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 MAGI1Q96QZ7 1491 aaPredicted RBP13.22□□□□□ -0.29
COL25A1-209ENST00000622134 DNAJC5BQ9UF47 199 aa13.22□□□□□ -0.29
COL25A1-209ENST00000622134 RAB3GAP2Q9H2M9 1393 aa13.22□□□□□ -0.29
COL25A1-209ENST00000622134 CFAP44Q96MT7 982 aa13.21□□□□□ -0.29
COL25A1-209ENST00000622134 EFCAB5A4FU69 1503 aa13.21□□□□□ -0.29
COL25A1-209ENST00000622134 KIAA0586Q9BVV6 1533 aa13.21□□□□□ -0.29
COL25A1-209ENST00000622134 RALBP1Q15311 655 aa13.21□□□□□ -0.29
COL25A1-209ENST00000622134 PRDM2Q13029 1718 aa13.21□□□□□ -0.29
COL25A1-209ENST00000622134 CHAF1AQ13111 956 aaPredicted RBP13.21□□□□□ -0.3
COL25A1-209ENST00000622134 KIF15Q9NS87 1388 aa13.2□□□□□ -0.3
COL25A1-209ENST00000622134 IPO8O15397 1037 aaKnown RBP13.2□□□□□ -0.3
COL25A1-209ENST00000622134 DHX57Q6P158 1386 aaKnown RBP13.2□□□□□ -0.3
COL25A1-209ENST00000622134 CASKIN1Q8WXD9 1431 aa13.2□□□□□ -0.3
COL25A1-209ENST00000622134 RGS3P49796 1198 aa13.19□□□□□ -0.3
COL25A1-209ENST00000622134 PSME1Q06323 249 aa13.19□□□□□ -0.3
COL25A1-209ENST00000622134 ERICH3Q5RHP9 1530 aa13.19□□□□□ -0.3
COL25A1-209ENST00000622134 UBE2Q2Q8WVN8 375 aa13.19□□□□□ -0.3
COL25A1-209ENST00000622134 COG3Q96JB2 828 aa13.19□□□□□ -0.3
COL25A1-209ENST00000622134 STK31Q9BXU1 1019 aa13.18□□□□□ -0.3
COL25A1-209ENST00000622134 U2AF1L5P0DN76 240 aaPredicted RBP13.18□□□□□ -0.3
COL25A1-209ENST00000622134 U2AF1Q01081 240 aaKnown RBP eCLIP13.18□□□□□ -0.3
COL25A1-209ENST00000622134 TRAK1Q9UPV9 953 aa13.18□□□□□ -0.3
COL25A1-209ENST00000622134 FYCO1Q9BQS8 1478 aa13.18□□□□□ -0.3
COL25A1-209ENST00000622134 PODXL2Q9NZ53 605 aa13.18□□□□□ -0.3
COL25A1-209ENST00000622134 SYNJ1O43426 1573 aa13.18□□□□□ -0.3
COL25A1-209ENST00000622134 BICRAQ9NZM4 1560 aa13.17□□□□□ -0.3
COL25A1-209ENST00000622134 DMRT2Q9Y5R5 561 aa13.16□□□□□ -0.3
COL25A1-209ENST00000622134 ANKLE2Q86XL3 938 aa13.16□□□□□ -0.3
COL25A1-209ENST00000622134 NUTM2DQ5VT03 806 aaPredicted RBP13.16□□□□□ -0.3
COL25A1-209ENST00000622134 SLC52A1Q9NWF4 448 aa13.16□□□□□ -0.3
COL25A1-209ENST00000622134 HSCBQ8IWL3 235 aa13.15□□□□□ -0.3
COL25A1-209ENST00000622134 HSPA5P11021 654 aaKnown RBP13.15□□□□□ -0.3
COL25A1-209ENST00000622134 GTF2E1P29083 439 aaPredicted RBP13.15□□□□□ -0.3
COL25A1-209ENST00000622134 PROSER2Q86WR7 435 aaPredicted RBP13.15□□□□□ -0.3
COL25A1-209ENST00000622134 WASHC2AQ641Q2 1341 aa13.15□□□□□ -0.3
COL25A1-209ENST00000622134 G3V3G9 751 aa13.14□□□□□ -0.31
COL25A1-209ENST00000622134 C1orf141Q5JVX7 400 aa13.14□□□□□ -0.31
COL25A1-209ENST00000622134 DCAF8Q5TAQ9 597 aa13.14□□□□□ -0.31
COL25A1-209ENST00000622134 TXNDC2Q86VQ3 553 aa13.14□□□□□ -0.31
COL25A1-209ENST00000622134 KIF21BO75037 1637 aa13.14□□□□□ -0.31
COL25A1-209ENST00000622134 GBP4Q96PP9 640 aa13.13□□□□□ -0.31
COL25A1-209ENST00000622134 ABCA10Q8WWZ4 1543 aa13.13□□□□□ -0.31
COL25A1-209ENST00000622134 PHF23Q9BUL5 403 aaPredicted RBP13.13□□□□□ -0.31
COL25A1-209ENST00000622134 ZNF330Q9Y3S2 320 aaPredicted RBP13.13□□□□□ -0.31
COL25A1-209ENST00000622134 TROQ12816 1431 aaPredicted RBP13.13□□□□□ -0.31
COL25A1-209ENST00000622134 GPRASP1Q5JY77 1395 aa13.13□□□□□ -0.31
COL25A1-209ENST00000622134 HSP90AB1P08238 724 aaKnown RBP13.13□□□□□ -0.31
COL25A1-209ENST00000622134 PHLDB1Q86UU1 1377 aa13.12□□□□□ -0.31
COL25A1-209ENST00000622134 CGNL1Q0VF96 1302 aa13.12□□□□□ -0.31
COL25A1-209ENST00000622134 TOP2BQ02880 1626 aa13.11□□□□□ -0.31
COL25A1-209ENST00000622134 L3MBTL2Q969R5 705 aa13.11□□□□□ -0.31
COL25A1-209ENST00000622134 ANKRD50Q9ULJ7 1429 aa13.11□□□□□ -0.31
COL25A1-209ENST00000622134 MIA2Q96PC5 1412 aa13.11□□□□□ -0.31
COL25A1-209ENST00000622134 NUTM2FA1L443 756 aa13.11□□□□□ -0.31
COL25A1-209ENST00000622134 FAM43AQ8N2R8 423 aa13.1□□□□□ -0.31
COL25A1-209ENST00000622134 AFAP1Q8N556 730 aa13.1□□□□□ -0.31
COL25A1-209ENST00000622134 FRAT1Q92837 279 aaPredicted RBP13.1□□□□□ -0.31
COL25A1-209ENST00000622134 TAF7LQ5H9L4 462 aa13.1□□□□□ -0.31
COL25A1-209ENST00000622134 IL27Q8NEV9 243 aa13.1□□□□□ -0.31
COL25A1-209ENST00000622134 FGD6Q6ZV73 1430 aa13.1□□□□□ -0.31
COL25A1-209ENST00000622134 PDE4AP27815 886 aa13.1□□□□□ -0.31
COL25A1-209ENST00000622134 FGD1P98174 961 aa13.1□□□□□ -0.31
COL25A1-209ENST00000622134 SF3B2Q13435 895 aaKnown RBP13.1□□□□□ -0.31
COL25A1-209ENST00000622134 RUSC2Q8N2Y8 1516 aa13.09□□□□□ -0.31
COL25A1-209ENST00000622134 KCNJ4P48050 445 aa13.09□□□□□ -0.31
COL25A1-209ENST00000622134 RRBP1Q9P2E9 1410 aaKnown RBP13.09□□□□□ -0.31
COL25A1-209ENST00000622134 PPP6R1Q9UPN7 881 aa13.09□□□□□ -0.31
COL25A1-209ENST00000622134 CD109Q6YHK3 1445 aa13.08□□□□□ -0.32
COL25A1-209ENST00000622134 LTV1Q96GA3 475 aaPredicted RBP13.08□□□□□ -0.32
COL25A1-209ENST00000622134 KIAA2012Q0VF49 1180 aa13.08□□□□□ -0.32
COL25A1-209ENST00000622134 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.08□□□□□ -0.32
COL25A1-209ENST00000622134 MAP7D2Q96T17 732 aa13.08□□□□□ -0.32
COL25A1-209ENST00000622134 SCAPERQ9BY12 1400 aa13.08□□□□□ -0.32
COL25A1-209ENST00000622134 RCAN3Q9UKA8 241 aa13.08□□□□□ -0.32
COL25A1-209ENST00000622134 MINK1Q8N4C8 1332 aaPredicted RBP13.07□□□□□ -0.32
COL25A1-209ENST00000622134 HECW1Q76N89 1606 aa13.07□□□□□ -0.32
COL25A1-209ENST00000622134 TEFQ10587 303 aa13.07□□□□□ -0.32
COL25A1-209ENST00000622134 ZRSR1Q15695 479 aaKnown RBP13.07□□□□□ -0.32
COL25A1-209ENST00000622134 GZF1Q9H116 711 aaPredicted RBP13.07□□□□□ -0.32
COL25A1-209ENST00000622134 TTC5Q8N0Z6 440 aa13.06□□□□□ -0.32
COL25A1-209ENST00000622134 CENPJQ9HC77 1338 aaPredicted RBP13.06□□□□□ -0.32
COL25A1-209ENST00000622134 SLKQ9H2G2 1235 aaPredicted RBP13.06□□□□□ -0.32
COL25A1-209ENST00000622134 TNNT3P45378 269 aaPredicted RBP13.06□□□□□ -0.32
COL25A1-209ENST00000622134 RAPGEF4Q8WZA2 1011 aa13.05□□□□□ -0.32
COL25A1-209ENST00000622134 GRIN2AQ12879 1464 aa13.05□□□□□ -0.32
COL25A1-209ENST00000622134 MSH5O43196 834 aa13.05□□□□□ -0.32
COL25A1-209ENST00000622134 HFM1A2PYH4 1435 aa13.05□□□□□ -0.32
COL25A1-209ENST00000622134 AMER1Q5JTC6 1135 aaPredicted RBP13.05□□□□□ -0.32
COL25A1-209ENST00000622134 PLB1Q6P1J6 1458 aa13.05□□□□□ -0.32
COL25A1-209ENST00000622134 RPGRIP1LQ68CZ1 1315 aa13.04□□□□□ -0.32
COL25A1-209ENST00000622134 GORABQ5T7V8 394 aa13.04□□□□□ -0.32
COL25A1-209ENST00000622134 MTERF4Q7Z6M4 381 aaKnown RBP13.04□□□□□ -0.32
COL25A1-209ENST00000622134 NCOA2Q15596 1464 aa13.04□□□□□ -0.32
COL25A1-209ENST00000622134 EHBP1L1Q8N3D4 1523 aa13.04□□□□□ -0.32
COL25A1-209ENST00000622134 NLRP13Q86W25 1043 aa13.04□□□□□ -0.32
COL25A1-209ENST00000622134 MCCP23508 829 aa13.04□□□□□ -0.32
COL25A1-209ENST00000622134 RRP9O43818 475 aaKnown RBP13.04□□□□□ -0.32
COL25A1-209ENST00000622134 HMMRO75330 724 aa13.04□□□□□ -0.32
COL25A1-209ENST00000622134 TEX14Q8IWB6 1497 aa13.03□□□□□ -0.32
COL25A1-209ENST00000622134 GPATCH3Q96I76 525 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms