RNA–Protein interactions for RNA: ENST00000622132.4

ABCB1-211, Transcript of ATP binding cassette subfamily B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCB1, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-211ENST00000622132 ANP32EQ9BTT0 268 aa11.56□□□□□ -0.56
ABCB1-211ENST00000622132 KIAA1107Q9UPP5 1409 aa11.56□□□□□ -0.56
ABCB1-211ENST00000622132 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.56□□□□□ -0.56
ABCB1-211ENST00000622132 PPM1GO15355 546 aaPredicted RBP11.55□□□□□ -0.56
ABCB1-211ENST00000622132 STAC3Q96MF2 364 aa11.55□□□□□ -0.56
ABCB1-211ENST00000622132 SLC52A1Q9NWF4 448 aa11.55□□□□□ -0.56
ABCB1-211ENST00000622132 ST20-MTHFSA0A0A6YYL1 179 aa11.54□□□□□ -0.56
ABCB1-211ENST00000622132 DHX29Q7Z478 1369 aaKnown RBP11.54□□□□□ -0.56
ABCB1-211ENST00000622132 TRAPPC8Q9Y2L5 1435 aa11.53□□□□□ -0.56
ABCB1-211ENST00000622132 TNNT2P45379 298 aaPredicted RBP11.53□□□□□ -0.56
ABCB1-211ENST00000622132 CC2D1BQ5T0F9 858 aaKnown RBP11.53□□□□□ -0.56
ABCB1-211ENST00000622132 SYCP2Q9BX26 1530 aa11.53□□□□□ -0.56
ABCB1-211ENST00000622132 ERCC6L2Q5T890 1561 aa11.52□□□□□ -0.56
ABCB1-211ENST00000622132 CFAP53Q96M91 514 aa11.52□□□□□ -0.57
ABCB1-211ENST00000622132 CFAP43Q8NDM7 1665 aa11.52□□□□□ -0.57
ABCB1-211ENST00000622132 UHRF1BP1LA0JNW5 1464 aa11.52□□□□□ -0.57
ABCB1-211ENST00000622132 ZNF518AQ6AHZ1 1483 aa11.52□□□□□ -0.57
ABCB1-211ENST00000622132 ABCA8O94911 1581 aa11.52□□□□□ -0.57
ABCB1-211ENST00000622132 ITSN2Q9NZM3 1697 aa11.51□□□□□ -0.57
ABCB1-211ENST00000622132 PTPRKQ15262 1439 aa11.51□□□□□ -0.57
ABCB1-211ENST00000622132 HDGFL2Q7Z4V5 671 aaPredicted RBP11.51□□□□□ -0.57
ABCB1-211ENST00000622132 TXNDC2Q86VQ3 553 aa11.51□□□□□ -0.57
ABCB1-211ENST00000622132 NUTM2FA1L443 756 aa11.5□□□□□ -0.57
ABCB1-211ENST00000622132 THEMISQ8N1K5 641 aaPredicted RBP11.5□□□□□ -0.57
ABCB1-211ENST00000622132 KDM5BQ9UGL1 1544 aa11.5□□□□□ -0.57
ABCB1-211ENST00000622132 AEBP2Q6ZN18 517 aaPredicted RBP11.49□□□□□ -0.57
ABCB1-211ENST00000622132 SOX12O15370 315 aa11.48□□□□□ -0.57
ABCB1-211ENST00000622132 USP47Q96K76 1375 aa11.48□□□□□ -0.57
ABCB1-211ENST00000622132 ABCC10Q5T3U5 1492 aa11.48□□□□□ -0.57
ABCB1-211ENST00000622132 CANXP27824 592 aaKnown RBP11.48□□□□□ -0.57
ABCB1-211ENST00000622132 CFAP70Q5T0N1 1121 aa11.48□□□□□ -0.57
ABCB1-211ENST00000622132 TMEM132EQ6IEE7 984 aa11.48□□□□□ -0.57
ABCB1-211ENST00000622132 CEBPAP49715 358 aaPredicted RBP11.47□□□□□ -0.57
ABCB1-211ENST00000622132 FBXO31Q5XUX0 539 aaPredicted RBP11.47□□□□□ -0.57
ABCB1-211ENST00000622132 MINK1Q8N4C8 1332 aaPredicted RBP11.47□□□□□ -0.57
ABCB1-211ENST00000622132 PPP6R1Q9UPN7 881 aa11.47□□□□□ -0.57
ABCB1-211ENST00000622132 TCOF1Q13428 1488 aaKnown RBP11.47□□□□□ -0.57
ABCB1-211ENST00000622132 MORC1Q86VD1 984 aa11.47□□□□□ -0.57
ABCB1-211ENST00000622132 PAK3O75914 559 aaPredicted RBP11.46□□□□□ -0.57
ABCB1-211ENST00000622132 A2MP01023 1474 aa11.46□□□□□ -0.57
ABCB1-211ENST00000622132 MAGI3Q5TCQ9 1506 aa11.46□□□□□ -0.57
ABCB1-211ENST00000622132 DNAJC5Q9H3Z4 198 aa11.46□□□□□ -0.57
ABCB1-211ENST00000622132 TERF2IPQ9NYB0 399 aa11.46□□□□□ -0.58
ABCB1-211ENST00000622132 NGDNQ8NEJ9 315 aaKnown RBP11.46□□□□□ -0.58
ABCB1-211ENST00000622132 NUDCQ9Y266 331 aa11.44□□□□□ -0.58
ABCB1-211ENST00000622132 EVC2Q86UK5 1308 aa11.44□□□□□ -0.58
ABCB1-211ENST00000622132 CENPJQ9HC77 1338 aaPredicted RBP11.43□□□□□ -0.58
ABCB1-211ENST00000622132 IDI1Q13907 227 aa11.43□□□□□ -0.58
ABCB1-211ENST00000622132 ERBINQ96RT1 1412 aa11.43□□□□□ -0.58
ABCB1-211ENST00000622132 ANKRD30BQ9BXX2 1392 aa11.43□□□□□ -0.58
ABCB1-211ENST00000622132 NBPF1Q3BBV0 1214 aa11.43□□□□□ -0.58
ABCB1-211ENST00000622132 CLASP1Q7Z460 1538 aa11.43□□□□□ -0.58
ABCB1-211ENST00000622132 DUOX2Q9NRD8 1548 aa11.43□□□□□ -0.58
ABCB1-211ENST00000622132 SENP3-EIF4A1A0A087X0R7 540 aa11.42□□□□□ -0.58
ABCB1-211ENST00000622132 ANKLE2Q86XL3 938 aa11.42□□□□□ -0.58
ABCB1-211ENST00000622132 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.42□□□□□ -0.58
ABCB1-211ENST00000622132 RPGRIP1LQ68CZ1 1315 aa11.42□□□□□ -0.58
ABCB1-211ENST00000622132 RTEL1-TNFRSF6BF6WH68 1400 aa11.42□□□□□ -0.58
ABCB1-211ENST00000622132 U2SURPO15042 1029 aaKnown RBP11.41□□□□□ -0.58
ABCB1-211ENST00000622132 NBPF8Q3BBV2 869 aa11.41□□□□□ -0.58
ABCB1-211ENST00000622132 A0A0G2JS52 829 aa11.41□□□□□ -0.58
ABCB1-211ENST00000622132 SLC26A8Q96RN1 970 aa11.41□□□□□ -0.58
ABCB1-211ENST00000622132 KTN1Q86UP2 1357 aaKnown RBP11.41□□□□□ -0.58
ABCB1-211ENST00000622132 NEO1Q92859 1461 aa11.4□□□□□ -0.58
ABCB1-211ENST00000622132 SHANK2Q9UPX8 1470 aa11.4□□□□□ -0.59
ABCB1-211ENST00000622132 PANK3Q9H999 370 aa11.39□□□□□ -0.59
ABCB1-211ENST00000622132 NEUROD2Q15784 382 aa11.39□□□□□ -0.59
ABCB1-211ENST00000622132 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.39□□□□□ -0.59
ABCB1-211ENST00000622132 ZCCHC11Q5TAX3 1644 aaKnown RBP11.38□□□□□ -0.59
ABCB1-211ENST00000622132 MAPK8IP3Q9UPT6 1336 aa11.38□□□□□ -0.59
ABCB1-211ENST00000622132 RALBP1Q15311 655 aa11.36□□□□□ -0.59
ABCB1-211ENST00000622132 PRAM1Q96QH2 718 aa11.36□□□□□ -0.59
ABCB1-211ENST00000622132 DNMT1P26358 1616 aaKnown RBP11.35□□□□□ -0.59
ABCB1-211ENST00000622132 PROSER2Q86WR7 435 aaPredicted RBP11.35□□□□□ -0.59
ABCB1-211ENST00000622132 ATP7AQ04656 1500 aa11.35□□□□□ -0.59
ABCB1-211ENST00000622132 ATP10AO60312 1499 aa11.34□□□□□ -0.59
ABCB1-211ENST00000622132 TNRQ92752 1358 aa11.34□□□□□ -0.59
ABCB1-211ENST00000622132 ATF3P18847 181 aa11.34□□□□□ -0.59
ABCB1-211ENST00000622132 CCDC136Q96JN2 1154 aa11.34□□□□□ -0.59
ABCB1-211ENST00000622132 CABP2Q9NPB3 220 aa11.34□□□□□ -0.59
ABCB1-211ENST00000622132 CCER2I3L3R5 266 aa11.33□□□□□ -0.6
ABCB1-211ENST00000622132 MAPKBP1O60336 1514 aa11.33□□□□□ -0.6
ABCB1-211ENST00000622132 MBD5Q9P267 1494 aa11.33□□□□□ -0.6
ABCB1-211ENST00000622132 ZBTB47Q9UFB7 747 aaPredicted RBP11.33□□□□□ -0.6
ABCB1-211ENST00000622132 TTC37Q6PGP7 1564 aa11.33□□□□□ -0.6
ABCB1-211ENST00000622132 KIF7Q2M1P5 1343 aa11.33□□□□□ -0.6
ABCB1-211ENST00000622132 MYO5CQ9NQX4 1742 aa11.32□□□□□ -0.6
ABCB1-211ENST00000622132 PNNQ9H307 717 aaKnown RBP11.32□□□□□ -0.6
ABCB1-211ENST00000622132 ADGRF5Q8IZF2 1346 aa11.32□□□□□ -0.6
ABCB1-211ENST00000622132 ANO8Q9HCE9 1232 aaPredicted RBP11.32□□□□□ -0.6
ABCB1-211ENST00000622132 ADGRL2O95490 1459 aa11.32□□□□□ -0.6
ABCB1-211ENST00000622132 CGNL1Q0VF96 1302 aa11.32□□□□□ -0.6
ABCB1-211ENST00000622132 FAM135AQ9P2D6 1515 aa11.31□□□□□ -0.6
ABCB1-211ENST00000622132 RPRD2Q5VT52 1461 aaKnown RBP11.31□□□□□ -0.6
ABCB1-211ENST00000622132 U2AF1L5P0DN76 240 aaPredicted RBP11.31□□□□□ -0.6
ABCB1-211ENST00000622132 U2AF1Q01081 240 aaKnown RBP eCLIP11.31□□□□□ -0.6
ABCB1-211ENST00000622132 PSME1Q06323 249 aa11.31□□□□□ -0.6
ABCB1-211ENST00000622132 CSB-PGBD3P0DP91 1061 aa11.3□□□□□ -0.6
ABCB1-211ENST00000622132 ZMYM3Q14202 1370 aa11.3□□□□□ -0.6
ABCB1-211ENST00000622132 NLRP13Q86W25 1043 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms