RNA–Protein interactions for RNA: ENST00000622045.4

SYNRG-231, Transcript of synergin gamma, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SYNRG-231	ENST00000622045	NLRP13	Q86W25	1043 aa		18.94	■□□□□ 0.62
SYNRG-231	ENST00000622045	DDRGK1	Q96HY6	314 aa		18.94	■□□□□ 0.62
SYNRG-231	ENST00000622045	TRO	Q12816	1431 aa	Predicted RBP	18.93	■□□□□ 0.62
SYNRG-231	ENST00000622045	TARBP1	Q13395	1621 aa	Known RBP	18.93	■□□□□ 0.62
SYNRG-231	ENST00000622045	CC2D1B	Q5T0F9	858 aa	Known RBP	18.92	■□□□□ 0.62
SYNRG-231	ENST00000622045	CRBN	Q96SW2	442 aa		18.91	■□□□□ 0.62
SYNRG-231	ENST00000622045	BCORL1	Q5H9F3	1711 aa		18.91	■□□□□ 0.62
SYNRG-231	ENST00000622045	KTN1	Q86UP2	1357 aa	Known RBP	18.9	■□□□□ 0.62
SYNRG-231	ENST00000622045	KIAA0586	Q9BVV6	1533 aa		18.9	■□□□□ 0.62
SYNRG-231	ENST00000622045	PDE3B	Q13370	1112 aa		18.89	■□□□□ 0.61
SYNRG-231	ENST00000622045	ADAMTS12	P58397	1594 aa		18.88	■□□□□ 0.61
SYNRG-231	ENST00000622045	HNRNPM	P52272	730 aa	Known RBP eCLIP	18.88	■□□□□ 0.61
SYNRG-231	ENST00000622045	GPATCH8	Q9UKJ3	1502 aa	Known RBP	18.88	■□□□□ 0.61
SYNRG-231	ENST00000622045	FRAT2	O75474	233 aa	Predicted RBP	18.88	■□□□□ 0.61
SYNRG-231	ENST00000622045	MBD5	Q9P267	1494 aa		18.87	■□□□□ 0.61
SYNRG-231	ENST00000622045	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	18.87	■□□□□ 0.61	3e-6	■■□□□ 11.4
SYNRG-231	ENST00000622045	LRPPRC	P42704	1394 aa	Known RBP	18.87	■□□□□ 0.61
SYNRG-231	ENST00000622045	DISP1	Q96F81	1524 aa		18.87	■□□□□ 0.61
SYNRG-231	ENST00000622045	PBRM1	Q86U86	1689 aa		18.85	■□□□□ 0.61
SYNRG-231	ENST00000622045	ZNF608	Q9ULD9	1512 aa	Predicted RBP	18.85	■□□□□ 0.61
SYNRG-231	ENST00000622045	PLB1	Q6P1J6	1458 aa		18.85	■□□□□ 0.61
SYNRG-231	ENST00000622045	POLR1A	O95602	1720 aa	Predicted RBP	18.84	■□□□□ 0.61
SYNRG-231	ENST00000622045	RALGAPB	Q86X10	1494 aa		18.84	■□□□□ 0.61
SYNRG-231	ENST00000622045	KDM5C	P41229	1560 aa		18.83	■□□□□ 0.61
SYNRG-231	ENST00000622045	RAPGEF6	Q8TEU7	1601 aa		18.83	■□□□□ 0.61
SYNRG-231	ENST00000622045	NBPF1	Q3BBV0	1214 aa		18.83	■□□□□ 0.6
SYNRG-231	ENST00000622045	C20orf194	Q5TEA3	1177 aa		18.83	■□□□□ 0.6
SYNRG-231	ENST00000622045	KIAA0556	O60303	1618 aa		18.83	■□□□□ 0.6
SYNRG-231	ENST00000622045	UHRF1BP1	Q6BDS2	1440 aa		18.82	■□□□□ 0.6
SYNRG-231	ENST00000622045	KIF14	Q15058	1648 aa		18.82	■□□□□ 0.6
SYNRG-231	ENST00000622045	JPH4	Q96JJ6	628 aa		18.82	■□□□□ 0.6
SYNRG-231	ENST00000622045	RGS3	P49796	1198 aa		18.81	■□□□□ 0.6
SYNRG-231	ENST00000622045	ARX	Q96QS3	562 aa		18.81	■□□□□ 0.6
SYNRG-231	ENST00000622045	C9orf84	Q5VXU9	1444 aa		18.81	■□□□□ 0.6
SYNRG-231	ENST00000622045	PANK3	Q9H999	370 aa		18.79	■□□□□ 0.6
SYNRG-231	ENST00000622045	MRC2	Q9UBG0	1479 aa		18.78	■□□□□ 0.6
SYNRG-231	ENST00000622045	ADGRL2	O95490	1459 aa		18.78	■□□□□ 0.6
SYNRG-231	ENST00000622045	CARMIL2	Q6F5E8	1435 aa		18.77	■□□□□ 0.6
SYNRG-231	ENST00000622045	GRIN2A	Q12879	1464 aa		18.75	■□□□□ 0.59
SYNRG-231	ENST00000622045	CCDC144A	A2RUR9	1427 aa		18.74	■□□□□ 0.59
SYNRG-231	ENST00000622045	IFT140	Q96RY7	1462 aa		18.74	■□□□□ 0.59
SYNRG-231	ENST00000622045	PER1	O15534	1290 aa	Predicted RBP	18.74	■□□□□ 0.59
SYNRG-231	ENST00000622045	TMF1	P82094	1093 aa		18.74	■□□□□ 0.59
SYNRG-231	ENST00000622045	PARD3	Q8TEW0	1356 aa		18.73	■□□□□ 0.59
SYNRG-231	ENST00000622045	RSPH6A	Q9H0K4	717 aa		18.73	■□□□□ 0.59
SYNRG-231	ENST00000622045	WDR43	Q15061	677 aa	Known RBP eCLIP	18.73	■□□□□ 0.59
SYNRG-231	ENST00000622045	ITSN2	Q9NZM3	1697 aa		18.72	■□□□□ 0.59
SYNRG-231	ENST00000622045	ARHGEF12	Q9NZN5	1544 aa		18.71	■□□□□ 0.59
SYNRG-231	ENST00000622045	FAM161A	Q3B820	660 aa		18.71	■□□□□ 0.59
SYNRG-231	ENST00000622045	FAM43A	Q8N2R8	423 aa		18.71	■□□□□ 0.58
SYNRG-231	ENST00000622045	POGK	Q9P215	609 aa		18.7	■□□□□ 0.58
SYNRG-231	ENST00000622045	ADGB	Q8N7X0	1667 aa		18.7	■□□□□ 0.58
SYNRG-231	ENST00000622045	ADAMTS8	Q9UP79	889 aa		18.7	■□□□□ 0.58
SYNRG-231	ENST00000622045	KNSTRN	Q9Y448	316 aa		18.69	■□□□□ 0.58
SYNRG-231	ENST00000622045	C8orf34	Q49A92	452 aa		18.69	■□□□□ 0.58
SYNRG-231	ENST00000622045	SLK	Q9H2G2	1235 aa	Predicted RBP	18.67	■□□□□ 0.58
SYNRG-231	ENST00000622045	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	18.66	■□□□□ 0.58
SYNRG-231	ENST00000622045	DISP3	Q9P2K9	1392 aa		18.65	■□□□□ 0.58
SYNRG-231	ENST00000622045	MAGI1	Q96QZ7	1491 aa	Predicted RBP	18.65	■□□□□ 0.58
SYNRG-231	ENST00000622045	PRAG1	Q86YV5	1406 aa		18.64	■□□□□ 0.58
SYNRG-231	ENST00000622045	CENPQ	Q7L2Z9	268 aa	Predicted RBP	18.64	■□□□□ 0.57
SYNRG-231	ENST00000622045	RRAGD	Q9NQL2	400 aa	Predicted RBP	18.64	■□□□□ 0.57
SYNRG-231	ENST00000622045	TESK2	Q96S53	571 aa		18.64	■□□□□ 0.57
SYNRG-231	ENST00000622045	KDM2B	Q8NHM5	1336 aa		18.63	■□□□□ 0.57
SYNRG-231	ENST00000622045	RSPH4A	Q5TD94	716 aa		18.62	■□□□□ 0.57
SYNRG-231	ENST00000622045	GOLGA2	Q08379	1002 aa		18.62	■□□□□ 0.57
SYNRG-231	ENST00000622045	ATP10B	O94823	1461 aa		18.61	■□□□□ 0.57
SYNRG-231	ENST00000622045	SHANK2	Q9UPX8	1470 aa		18.6	■□□□□ 0.57
SYNRG-231	ENST00000622045	ERBIN	Q96RT1	1412 aa		18.6	■□□□□ 0.57
SYNRG-231	ENST00000622045	PKNOX2	Q96KN3	472 aa		18.59	■□□□□ 0.57
SYNRG-231	ENST00000622045	NAP1L5	Q96NT1	182 aa	Predicted RBP	18.59	■□□□□ 0.57
SYNRG-231	ENST00000622045	PPP2R1A	P30153	589 aa		18.58	■□□□□ 0.56
SYNRG-231	ENST00000622045	CCDC146	Q8IYE0	955 aa		18.58	■□□□□ 0.56
SYNRG-231	ENST00000622045	FAM135A	Q9P2D6	1515 aa		18.57	■□□□□ 0.56
SYNRG-231	ENST00000622045	CROCC2	H7BZ55	1655 aa		18.57	■□□□□ 0.56
SYNRG-231	ENST00000622045	CEP170	Q5SW79	1584 aa		18.57	■□□□□ 0.56
SYNRG-231	ENST00000622045	PTPRG	P23470	1445 aa		18.56	■□□□□ 0.56
SYNRG-231	ENST00000622045	DUSP27	Q5VZP5	1158 aa		18.56	■□□□□ 0.56
SYNRG-231	ENST00000622045	ABCC10	Q5T3U5	1492 aa		18.56	■□□□□ 0.56
SYNRG-231	ENST00000622045	SPRYD3	Q8NCJ5	442 aa		18.55	■□□□□ 0.56
SYNRG-231	ENST00000622045	GZF1	Q9H116	711 aa	Predicted RBP	18.55	■□□□□ 0.56
SYNRG-231	ENST00000622045	SYNJ2	O15056	1496 aa		18.55	■□□□□ 0.56
SYNRG-231	ENST00000622045	VSIG10	Q8N0Z9	540 aa		18.54	■□□□□ 0.56
SYNRG-231	ENST00000622045	BLM	P54132	1417 aa	Predicted RBP	18.54	■□□□□ 0.56
SYNRG-231	ENST00000622045	ERCC6	Q03468	1493 aa		18.54	■□□□□ 0.56
SYNRG-231	ENST00000622045	CCDC141	Q6ZP82	1450 aa		18.54	■□□□□ 0.56
SYNRG-231	ENST00000622045	COL17A1	Q9UMD9	1497 aa	Predicted RBP	18.54	■□□□□ 0.56
SYNRG-231	ENST00000622045	SEC24B	O95487	1268 aa		18.54	■□□□□ 0.56
SYNRG-231	ENST00000622045	CDCA8	Q53HL2	280 aa		18.53	■□□□□ 0.56
SYNRG-231	ENST00000622045	GPRASP1	Q5JY77	1395 aa		18.53	■□□□□ 0.56
SYNRG-231	ENST00000622045	KDM5D	Q9BY66	1539 aa		18.52	■□□□□ 0.56
SYNRG-231	ENST00000622045	CANX	P27824	592 aa	Known RBP	18.52	■□□□□ 0.56
SYNRG-231	ENST00000622045	ADCY10	Q96PN6	1610 aa		18.52	■□□□□ 0.56
SYNRG-231	ENST00000622045	EIF4G3	O43432	1585 aa	Known RBP	18.52	■□□□□ 0.56
SYNRG-231	ENST00000622045	A2M	P01023	1474 aa		18.52	■□□□□ 0.56
SYNRG-231	ENST00000622045	PLEKHH1	Q9ULM0	1364 aa		18.52	■□□□□ 0.55
SYNRG-231	ENST00000622045	APAF1	O14727	1248 aa		18.51	■□□□□ 0.55
SYNRG-231	ENST00000622045	CDC42BPA	Q5VT25	1732 aa		18.5	■□□□□ 0.55
SYNRG-231	ENST00000622045	PLEKHH2	Q8IVE3	1493 aa		18.5	■□□□□ 0.55
SYNRG-231	ENST00000622045	INSR	P06213	1382 aa		18.48	■□□□□ 0.55

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