RNA–Protein interactions for RNA: ENST00000621973.1

DDX1-208, Transcript of DEAD-box helicase 1, humanhuman

TSL 5 BASIC

Gene DDX1, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-208ENST00000621973 AMOTL2Q9Y2J4 779 aa9.42□□□□□ -0.9
DDX1-208ENST00000621973 PEG3Q9GZU2 1588 aa9.42□□□□□ -0.9
DDX1-208ENST00000621973 MINK1Q8N4C8 1332 aaPredicted RBP9.41□□□□□ -0.9
DDX1-208ENST00000621973 TMEM106CQ9BVX2 250 aa9.4□□□□□ -0.91
DDX1-208ENST00000621973 GOPCQ9HD26 462 aa9.4□□□□□ -0.91
DDX1-208ENST00000621973 FXR2P51116 673 aaKnown RBP eCLIP9.39□□□□□ -0.91
DDX1-208ENST00000621973 MAP2K5Q13163 448 aa9.39□□□□□ -0.91
DDX1-208ENST00000621973 AMHR2Q16671 573 aa9.39□□□□□ -0.91
DDX1-208ENST00000621973 CCDC102AQ96A19 550 aa9.39□□□□□ -0.91
DDX1-208ENST00000621973 PPM1GO15355 546 aaPredicted RBP9.39□□□□□ -0.91
DDX1-208ENST00000621973 IGSF5Q9NSI5 407 aa9.39□□□□□ -0.91
DDX1-208ENST00000621973 DSG2Q14126 1118 aa9.38□□□□□ -0.91
DDX1-208ENST00000621973 UBE2Q2Q8WVN8 375 aa9.38□□□□□ -0.91
DDX1-208ENST00000621973 ABCC8Q09428 1581 aa9.38□□□□□ -0.91
DDX1-208ENST00000621973 CCDC125Q86Z20 511 aa9.37□□□□□ -0.91
DDX1-208ENST00000621973 IRF6O14896 467 aa9.37□□□□□ -0.91
DDX1-208ENST00000621973 ILDR1Q86SU0 546 aaPredicted RBP9.36□□□□□ -0.91
DDX1-208ENST00000621973 CWC22Q9HCG8 908 aaKnown RBP9.36□□□□□ -0.91
DDX1-208ENST00000621973 PPARGC1BQ86YN6 1023 aaKnown RBP9.35□□□□□ -0.91
DDX1-208ENST00000621973 CCDC27Q2M243 656 aa9.34□□□□□ -0.91
DDX1-208ENST00000621973 PHF12Q96QT6 1004 aa9.34□□□□□ -0.91
DDX1-208ENST00000621973 ZRANB1Q9UGI0 708 aa9.34□□□□□ -0.91
DDX1-208ENST00000621973 ATAD2BQ9ULI0 1458 aa9.33□□□□□ -0.92
DDX1-208ENST00000621973 NUTM2FA1L443 756 aa9.33□□□□□ -0.92
DDX1-208ENST00000621973 FOXK1P85037 733 aa9.33□□□□□ -0.92
DDX1-208ENST00000621973 TRPC6Q9Y210 931 aa9.32□□□□□ -0.92
DDX1-208ENST00000621973 EEA1Q15075 1411 aa9.32□□□□□ -0.92
DDX1-208ENST00000621973 CARNS1A5YM72 827 aa9.31□□□□□ -0.92
DDX1-208ENST00000621973 GRXCR2A6NFK2 248 aa9.31□□□□□ -0.92
DDX1-208ENST00000621973 GNPATO15228 680 aa9.31□□□□□ -0.92
DDX1-208ENST00000621973 ZEB1P37275 1124 aaPredicted RBP9.31□□□□□ -0.92
DDX1-208ENST00000621973 KCNA1Q09470 495 aa9.3□□□□□ -0.92
DDX1-208ENST00000621973 PCMTD1Q96MG8 357 aaPredicted RBP9.3□□□□□ -0.92
DDX1-208ENST00000621973 MYT1LQ9UL68 1186 aa9.3□□□□□ -0.92
DDX1-208ENST00000621973 SOGA1O94964 1423 aa9.3□□□□□ -0.92
DDX1-208ENST00000621973 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.3□□□□□ -0.928e-8■■□□□ 14.1
DDX1-208ENST00000621973 COG6Q9Y2V7 657 aa9.3□□□□□ -0.92
DDX1-208ENST00000621973 BRD1O95696 1058 aa9.29□□□□□ -0.92
DDX1-208ENST00000621973 PPP1R15AO75807 674 aaPredicted RBP9.29□□□□□ -0.92
DDX1-208ENST00000621973 HIC1Q14526 733 aa9.29□□□□□ -0.92
DDX1-208ENST00000621973 OSBPP22059 807 aa9.28□□□□□ -0.92
DDX1-208ENST00000621973 FECHP22830 423 aa9.28□□□□□ -0.92
DDX1-208ENST00000621973 TMC2Q8TDI7 906 aa9.28□□□□□ -0.92
DDX1-208ENST00000621973 BAZ1BQ9UIG0 1483 aaKnown RBP9.28□□□□□ -0.92
DDX1-208ENST00000621973 CD44P16070 742 aaKnown RBP9.27□□□□□ -0.92
DDX1-208ENST00000621973 TTLL12Q14166 644 aaPredicted RBP9.27□□□□□ -0.92
DDX1-208ENST00000621973 TNIKQ9UKE5 1360 aa9.27□□□□□ -0.92
DDX1-208ENST00000621973 WRNQ14191 1432 aaPredicted RBP eCLIP9.27□□□□□ -0.92
DDX1-208ENST00000621973 IVNS1ABPQ9Y6Y0 642 aa9.27□□□□□ -0.93
DDX1-208ENST00000621973 PATL2C9JE40 543 aaKnown RBP9.26□□□□□ -0.93
DDX1-208ENST00000621973 MS4A1P11836 297 aa9.26□□□□□ -0.93
DDX1-208ENST00000621973 FCHSD2O94868 740 aa9.26□□□□□ -0.93
DDX1-208ENST00000621973 MICALL2Q8IY33 904 aa9.26□□□□□ -0.93
DDX1-208ENST00000621973 MS4A3Q96HJ5 214 aa9.26□□□□□ -0.93
DDX1-208ENST00000621973 ZNF330Q9Y3S2 320 aaPredicted RBP9.26□□□□□ -0.93
DDX1-208ENST00000621973 SND1Q7KZF4 910 aaKnown RBP eCLIP9.25□□□□□ -0.932e-6■□□□□ 9.3
DDX1-208ENST00000621973 PLPP6Q8IY26 295 aa9.25□□□□□ -0.93
DDX1-208ENST00000621973 RUSC2Q8N2Y8 1516 aa9.25□□□□□ -0.93
DDX1-208ENST00000621973 SMARCA5O60264 1052 aaPredicted RBP9.24□□□□□ -0.93
DDX1-208ENST00000621973 MAP3K9P80192 1104 aa9.24□□□□□ -0.93
DDX1-208ENST00000621973 GIGYF2Q6Y7W6 1299 aaKnown RBP9.24□□□□□ -0.93
DDX1-208ENST00000621973 KIAA1522Q9P206 1035 aaPredicted RBP9.24□□□□□ -0.93
DDX1-208ENST00000621973 DPY19L2Q6NUT2 758 aa9.23□□□□□ -0.93
DDX1-208ENST00000621973 CEP162Q5TB80 1403 aa9.23□□□□□ -0.93
DDX1-208ENST00000621973 TTLL13PA6NNM8 815 aa9.23□□□□□ -0.93
DDX1-208ENST00000621973 PIP4P2Q8N4L2 257 aa9.23□□□□□ -0.93
DDX1-208ENST00000621973 TIE1P35590 1138 aa9.22□□□□□ -0.93
DDX1-208ENST00000621973 OXER1Q8TDS5 423 aa9.22□□□□□ -0.93
DDX1-208ENST00000621973 ACIN1Q9UKV3 1341 aaKnown RBP9.22□□□□□ -0.93
DDX1-208ENST00000621973 SYNJ1O43426 1573 aa9.22□□□□□ -0.93
DDX1-208ENST00000621973 PTGER2P43116 358 aa9.21□□□□□ -0.94
DDX1-208ENST00000621973 GOLGA3Q08378 1498 aa9.21□□□□□ -0.94
DDX1-208ENST00000621973 KIF3CO14782 793 aa9.2□□□□□ -0.94
DDX1-208ENST00000621973 CERS3Q8IU89 383 aa9.2□□□□□ -0.94
DDX1-208ENST00000621973 C2orf72A6NCS6 295 aa9.2□□□□□ -0.94
DDX1-208ENST00000621973 REPIN1Q9BWE0 567 aaKnown RBP9.2□□□□□ -0.94
DDX1-208ENST00000621973 PTGDRQ13258 359 aa9.19□□□□□ -0.94
DDX1-208ENST00000621973 NCAPD3P42695 1498 aa9.19□□□□□ -0.94
DDX1-208ENST00000621973 RBM47A0AV96 593 aaKnown RBP9.19□□□□□ -0.94
DDX1-208ENST00000621973 SH3D19Q5HYK7 790 aa9.19□□□□□ -0.94
DDX1-208ENST00000621973 PDE4CQ08493 712 aa9.18□□□□□ -0.94
DDX1-208ENST00000621973 DDX12PQ92771 950 aa9.18□□□□□ -0.94
DDX1-208ENST00000621973 HMGXB3Q12766 1538 aa9.17□□□□□ -0.94
DDX1-208ENST00000621973 CEP164Q9UPV0 1460 aa9.17□□□□□ -0.94
DDX1-208ENST00000621973 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.17□□□□□ -0.94
DDX1-208ENST00000621973 PRIM1P49642 420 aaKnown RBP9.17□□□□□ -0.94
DDX1-208ENST00000621973 KIF21BO75037 1637 aa9.17□□□□□ -0.94
DDX1-208ENST00000621973 PDCD7Q8N8D1 485 aaKnown RBP9.16□□□□□ -0.94
DDX1-208ENST00000621973 MRRFQ96E11 262 aaKnown RBP9.16□□□□□ -0.94
DDX1-208ENST00000621973 CALR3Q96L12 384 aaKnown RBP9.16□□□□□ -0.94
DDX1-208ENST00000621973 SPATA32Q96LK8 384 aa9.16□□□□□ -0.94
DDX1-208ENST00000621973 TMEM121BQ9BXQ6 578 aaPredicted RBP9.16□□□□□ -0.94
DDX1-208ENST00000621973 SNRKQ9NRH2 765 aa9.16□□□□□ -0.94
DDX1-208ENST00000621973 TRIM35Q9UPQ4 493 aa9.16□□□□□ -0.94
DDX1-208ENST00000621973 CADPSQ9ULU8 1353 aa9.16□□□□□ -0.94
DDX1-208ENST00000621973 PROCA1Q8NCQ7 364 aaPredicted RBP9.16□□□□□ -0.94
DDX1-208ENST00000621973 UPF1Q92900 1129 aaKnown RBP eCLIP9.16□□□□□ -0.94
DDX1-208ENST00000621973 BMP2KQ9NSY1 1161 aaPredicted RBP9.16□□□□□ -0.94
DDX1-208ENST00000621973 BRPF3Q9ULD4 1205 aa9.16□□□□□ -0.94
DDX1-208ENST00000621973 USTQ9Y2C2 406 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms