RNA–Protein interactions for RNA: ENST00000621861.1

LINC01517-204, Transcript of long intergenic non-protein coding RNA 1517, humanhuman

TSL 5

Gene LINC01517, Length 1,051 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01517-204ENST00000621861 TCOF1Q13428 1488 aaKnown RBP7.36□□□□□ -1.23
LINC01517-204ENST00000621861 SPDYE4A6NLX3 237 aa7.35□□□□□ -1.23
LINC01517-204ENST00000621861 POTEIP0CG38 1075 aa7.35□□□□□ -1.23
LINC01517-204ENST00000621861 PLCB2Q00722 1185 aa7.35□□□□□ -1.23
LINC01517-204ENST00000621861 SPDYE1Q8NFV5 336 aaPredicted RBP7.35□□□□□ -1.23
LINC01517-204ENST00000621861 PLA2R1Q13018 1463 aa7.35□□□□□ -1.23
LINC01517-204ENST00000621861 RAPGEF2Q9Y4G8 1499 aa7.35□□□□□ -1.23
LINC01517-204ENST00000621861 WRNQ14191 1432 aaPredicted RBP eCLIP7.35□□□□□ -1.23
LINC01517-204ENST00000621861 HRCP23327 699 aa7.34□□□□□ -1.23
LINC01517-204ENST00000621861 PRELPP51888 382 aa7.34□□□□□ -1.23
LINC01517-204ENST00000621861 LHX8Q68G74 356 aa7.34□□□□□ -1.23
LINC01517-204ENST00000621861 ABCA9Q8IUA7 1624 aa7.34□□□□□ -1.24
LINC01517-204ENST00000621861 POLR1AO95602 1720 aaPredicted RBP7.33□□□□□ -1.24
LINC01517-204ENST00000621861 ARID3CA6NKF2 412 aa7.33□□□□□ -1.24
LINC01517-204ENST00000621861 CCDC125Q86Z20 511 aa7.33□□□□□ -1.24
LINC01517-204ENST00000621861 JCADQ9P266 1359 aa7.33□□□□□ -1.24
LINC01517-204ENST00000621861 PHLPP1O60346 1717 aa7.32□□□□□ -1.24
LINC01517-204ENST00000621861 ATP10AO60312 1499 aa7.32□□□□□ -1.24
LINC01517-204ENST00000621861 NHSL1Q5SYE7 1610 aa7.32□□□□□ -1.24
LINC01517-204ENST00000621861 FHOD3Q2V2M9 1422 aa7.32□□□□□ -1.24
LINC01517-204ENST00000621861 ROBO1Q9Y6N7 1651 aa7.32□□□□□ -1.24
LINC01517-204ENST00000621861 HECW1Q76N89 1606 aa7.31□□□□□ -1.24
LINC01517-204ENST00000621861 RBM6P78332 1123 aaKnown RBP7.31□□□□□ -1.24
LINC01517-204ENST00000621861 C9orf84Q5VXU9 1444 aa7.31□□□□□ -1.24
LINC01517-204ENST00000621861 QTRT2Q9H974 415 aaKnown RBP7.31□□□□□ -1.24
LINC01517-204ENST00000621861 MYT1LQ9UL68 1186 aa7.31□□□□□ -1.24
LINC01517-204ENST00000621861 ZNF142P52746 1687 aaPredicted RBP7.31□□□□□ -1.24
LINC01517-204ENST00000621861 ZMYM4Q5VZL5 1548 aa7.31□□□□□ -1.24
LINC01517-204ENST00000621861 LRP6O75581 1613 aa7.3□□□□□ -1.24
LINC01517-204ENST00000621861 MAGI2Q86UL8 1455 aa7.3□□□□□ -1.24
LINC01517-204ENST00000621861 VWDEQ8N2E2 1590 aa7.3□□□□□ -1.24
LINC01517-204ENST00000621861 FAM135BQ49AJ0 1406 aa7.3□□□□□ -1.24
LINC01517-204ENST00000621861 VASPP50552 380 aaPredicted RBP7.3□□□□□ -1.24
LINC01517-204ENST00000621861 ZNF692Q9BU19 519 aaPredicted RBP7.3□□□□□ -1.24
LINC01517-204ENST00000621861 STRCP1A6NGW2 1772 aa7.3□□□□□ -1.24
LINC01517-204ENST00000621861 AFF2P51816 1311 aa7.29□□□□□ -1.24
LINC01517-204ENST00000621861 GIGYF1O75420 1035 aaPredicted RBP7.29□□□□□ -1.24
LINC01517-204ENST00000621861 ABCA8O94911 1581 aa7.29□□□□□ -1.24
LINC01517-204ENST00000621861 CEP170BQ9Y4F5 1589 aaPredicted RBP7.29□□□□□ -1.24
LINC01517-204ENST00000621861 MYO3AQ8NEV4 1616 aa7.28□□□□□ -1.24
LINC01517-204ENST00000621861 TNS4Q8IZW8 715 aa7.28□□□□□ -1.24
LINC01517-204ENST00000621861 CDK13Q14004 1512 aaKnown RBP7.27□□□□□ -1.25
LINC01517-204ENST00000621861 HAP1P54257 671 aaPredicted RBP7.27□□□□□ -1.25
LINC01517-204ENST00000621861 DEFB132Q7Z7B7 95 aa7.27□□□□□ -1.25
LINC01517-204ENST00000621861 NGLY1Q96IV0 654 aa7.27□□□□□ -1.25
LINC01517-204ENST00000621861 DISP1Q96F81 1524 aa7.27□□□□□ -1.25
LINC01517-204ENST00000621861 SPATA31A6Q5VVP1 1343 aa7.27□□□□□ -1.25
LINC01517-204ENST00000621861 SYNMO15061 1565 aa7.26□□□□□ -1.25
LINC01517-204ENST00000621861 EP400Q96L91 3159 aa7.26□□□□□ -1.25
LINC01517-204ENST00000621861 COL13A1Q5TAT6 717 aaPredicted RBP7.26□□□□□ -1.25
LINC01517-204ENST00000621861 PROM2Q8N271 834 aa7.26□□□□□ -1.25
LINC01517-204ENST00000621861 IQGAP2Q13576 1575 aa7.25□□□□□ -1.25
LINC01517-204ENST00000621861 SF3B2Q13435 895 aaKnown RBP7.25□□□□□ -1.25
LINC01517-204ENST00000621861 NPATQ14207 1427 aa7.25□□□□□ -1.25
LINC01517-204ENST00000621861 NEURL4Q96JN8 1562 aa7.25□□□□□ -1.25
LINC01517-204ENST00000621861 CFAP74Q9C0B2 1584 aa7.25□□□□□ -1.25
LINC01517-204ENST00000621861 CAMTA1Q9Y6Y1 1673 aa7.23□□□□□ -1.25
LINC01517-204ENST00000621861 XIRP1Q702N8 1843 aaKnown RBP7.23□□□□□ -1.25
LINC01517-204ENST00000621861 IFNLR1Q8IU57 520 aaPredicted RBP7.23□□□□□ -1.25
LINC01517-204ENST00000621861 CHD4Q14839 1912 aa7.23□□□□□ -1.25
LINC01517-204ENST00000621861 KDM5CP41229 1560 aa7.22□□□□□ -1.25
LINC01517-204ENST00000621861 ANKLE2Q86XL3 938 aa7.22□□□□□ -1.25
LINC01517-204ENST00000621861 PPP1R1BQ9UD71 204 aaPredicted RBP7.22□□□□□ -1.25
LINC01517-204ENST00000621861 R3HDM1Q15032 1099 aaKnown RBP7.21□□□□□ -1.26
LINC01517-204ENST00000621861 C8orf37Q96NL8 207 aa7.21□□□□□ -1.26
LINC01517-204ENST00000621861 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.2□□□□□ -1.26
LINC01517-204ENST00000621861 NWD1Q149M9 1564 aa7.2□□□□□ -1.26
LINC01517-204ENST00000621861 DNMT1P26358 1616 aaKnown RBP7.2□□□□□ -1.26
LINC01517-204ENST00000621861 CNTLNQ9NXG0 1405 aa7.2□□□□□ -1.26
LINC01517-204ENST00000621861 ZMYM3Q14202 1370 aa7.2□□□□□ -1.26
LINC01517-204ENST00000621861 CD44P16070 742 aaKnown RBP7.19□□□□□ -1.26
LINC01517-204ENST00000621861 BCANQ96GW7 911 aa7.19□□□□□ -1.26
LINC01517-204ENST00000621861 MROH2AA6NES4 1674 aa7.19□□□□□ -1.26
LINC01517-204ENST00000621861 NPHP4O75161 1426 aaPredicted RBP7.18□□□□□ -1.26
LINC01517-204ENST00000621861 PRR29P0C7W0 189 aa7.18□□□□□ -1.26
LINC01517-204ENST00000621861 IQGAP1P46940 1657 aa7.18□□□□□ -1.26
LINC01517-204ENST00000621861 UTRNP46939 3433 aa7.18□□□□□ -1.26
LINC01517-204ENST00000621861 BLMP54132 1417 aaPredicted RBP7.18□□□□□ -1.26
LINC01517-204ENST00000621861 SCAPERQ9BY12 1400 aa7.18□□□□□ -1.26
LINC01517-204ENST00000621861 BCL9LQ86UU0 1499 aa7.17□□□□□ -1.26
LINC01517-204ENST00000621861 FARP1Q9Y4F1 1045 aaPredicted RBP7.17□□□□□ -1.26
LINC01517-204ENST00000621861 COL16A1Q07092 1604 aaPredicted RBP7.16□□□□□ -1.26
LINC01517-204ENST00000621861 SHPRHQ149N8 1683 aa7.16□□□□□ -1.26
LINC01517-204ENST00000621861 VSIG10Q8N0Z9 540 aa7.16□□□□□ -1.26
LINC01517-204ENST00000621861 AGLP35573 1532 aa7.16□□□□□ -1.26
LINC01517-204ENST00000621861 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.16□□□□□ -1.26
LINC01517-204ENST00000621861 CLTCQ00610 1675 aaKnown RBP7.16□□□□□ -1.26
LINC01517-204ENST00000621861 ADGBQ8N7X0 1667 aa7.16□□□□□ -1.26
LINC01517-204ENST00000621861 A2ML1A8K2U0 1454 aa7.15□□□□□ -1.27
LINC01517-204ENST00000621861 HSPA6P17066 643 aa7.14□□□□□ -1.27
LINC01517-204ENST00000621861 FGD6Q6ZV73 1430 aa7.14□□□□□ -1.27
LINC01517-204ENST00000621861 ITSN2Q9NZM3 1697 aa7.14□□□□□ -1.27
LINC01517-204ENST00000621861 BIVM-ERCC5R4GMW8 1640 aa7.13□□□□□ -1.27
LINC01517-204ENST00000621861 ATP10BO94823 1461 aa7.13□□□□□ -1.27
LINC01517-204ENST00000621861 FAM9AQ8IZU1 332 aaPredicted RBP7.13□□□□□ -1.27
LINC01517-204ENST00000621861 LRRC9Q6ZRR7 1453 aa7.12□□□□□ -1.27
LINC01517-204ENST00000621861 SLAIN2Q9P270 581 aa7.12□□□□□ -1.27
LINC01517-204ENST00000621861 WWC3Q9ULE0 1092 aa7.12□□□□□ -1.27
LINC01517-204ENST00000621861 POTEB2H3BUK9 544 aa7.11□□□□□ -1.27
LINC01517-204ENST00000621861 PRKCSHP14314 528 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms