RNA–Protein interactions for RNA: ENST00000621526.4

CPNE3-211, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 279 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-211ENST00000621526 DIP2CQ9Y2E4 1556 aa4.02□□□□□ -1.77
CPNE3-211ENST00000621526 TMEM94Q12767 1356 aa4.02□□□□□ -1.77
CPNE3-211ENST00000621526 DHX29Q7Z478 1369 aaKnown RBP4.02□□□□□ -1.77
CPNE3-211ENST00000621526 FAM135AQ9P2D6 1515 aa4.01□□□□□ -1.77
CPNE3-211ENST00000621526 NLRP1Q9C000 1473 aa4.01□□□□□ -1.77
CPNE3-211ENST00000621526 KIF3BO15066 747 aa4.01□□□□□ -1.77
CPNE3-211ENST00000621526 RANGAP1P46060 587 aaPredicted RBP4.01□□□□□ -1.77
CPNE3-211ENST00000621526 TROQ12816 1431 aaPredicted RBP4.01□□□□□ -1.77
CPNE3-211ENST00000621526 ATAD2Q6PL18 1390 aa4.01□□□□□ -1.77
CPNE3-211ENST00000621526 A2MP01023 1474 aa4□□□□□ -1.77
CPNE3-211ENST00000621526 DNMT1P26358 1616 aaKnown RBP4□□□□□ -1.77
CPNE3-211ENST00000621526 CADPS2Q86UW7 1296 aa4□□□□□ -1.77
CPNE3-211ENST00000621526 LRRC59Q96AG4 307 aaKnown RBP4□□□□□ -1.77
CPNE3-211ENST00000621526 C19orf44Q9H6X5 657 aa4□□□□□ -1.77
CPNE3-211ENST00000621526 ZNF777Q9ULD5 760 aaPredicted RBP4□□□□□ -1.77
CPNE3-211ENST00000621526 CLIP1P30622 1438 aa4□□□□□ -1.77
CPNE3-211ENST00000621526 AFF2P51816 1311 aa3.99□□□□□ -1.77
CPNE3-211ENST00000621526 RTEL1-TNFRSF6BF6WH68 1400 aa3.99□□□□□ -1.77
CPNE3-211ENST00000621526 NCOA3Q9Y6Q9 1424 aa3.99□□□□□ -1.77
CPNE3-211ENST00000621526 YY1P25490 414 aa3.99□□□□□ -1.77
CPNE3-211ENST00000621526 CFDP1Q9UEE9 299 aaPredicted RBP3.99□□□□□ -1.77
CPNE3-211ENST00000621526 MROH2AA6NES4 1674 aa3.99□□□□□ -1.77
CPNE3-211ENST00000621526 ABCC1P33527 1531 aa3.99□□□□□ -1.77
CPNE3-211ENST00000621526 ARHGAP5Q13017 1502 aa3.99□□□□□ -1.77
CPNE3-211ENST00000621526 MSH6P52701 1360 aa3.99□□□□□ -1.77
CPNE3-211ENST00000621526 SAMD9Q5K651 1589 aa3.98□□□□□ -1.77
CPNE3-211ENST00000621526 NEURL4Q96JN8 1562 aa3.98□□□□□ -1.77
CPNE3-211ENST00000621526 FMN1Q68DA7 1419 aa3.98□□□□□ -1.77
CPNE3-211ENST00000621526 HDGFP51858 240 aaKnown RBP3.98□□□□□ -1.77
CPNE3-211ENST00000621526 FNBP4Q8N3X1 1017 aaPredicted RBP3.98□□□□□ -1.77
CPNE3-211ENST00000621526 TRPC5Q9UL62 973 aaPredicted RBP3.98□□□□□ -1.77
CPNE3-211ENST00000621526 DEPDC5O75140 1603 aa3.98□□□□□ -1.77
CPNE3-211ENST00000621526 PZPP20742 1482 aa3.98□□□□□ -1.77
CPNE3-211ENST00000621526 LRRC9Q6ZRR7 1453 aa3.98□□□□□ -1.77
CPNE3-211ENST00000621526 UGGT1Q9NYU2 1555 aa3.97□□□□□ -1.77
CPNE3-211ENST00000621526 CDK13Q14004 1512 aaKnown RBP3.97□□□□□ -1.77
CPNE3-211ENST00000621526 ATF3P18847 181 aa3.97□□□□□ -1.77
CPNE3-211ENST00000621526 SLC26A8Q96RN1 970 aa3.97□□□□□ -1.77
CPNE3-211ENST00000621526 TBX22Q9Y458 520 aa3.97□□□□□ -1.77
CPNE3-211ENST00000621526 ZNF142P52746 1687 aaPredicted RBP3.97□□□□□ -1.77
CPNE3-211ENST00000621526 DCAF8L1A6NGE4 600 aa3.96□□□□□ -1.78
CPNE3-211ENST00000621526 HRCP23327 699 aa3.96□□□□□ -1.78
CPNE3-211ENST00000621526 C8orf37Q96NL8 207 aa3.96□□□□□ -1.78
CPNE3-211ENST00000621526 USP21Q9UK80 565 aa3.96□□□□□ -1.78
CPNE3-211ENST00000621526 PLEKHH2Q8IVE3 1493 aa3.96□□□□□ -1.78
CPNE3-211ENST00000621526 SCAF11Q99590 1463 aaKnown RBP3.96□□□□□ -1.78
CPNE3-211ENST00000621526 ATP7AQ04656 1500 aa3.95□□□□□ -1.78
CPNE3-211ENST00000621526 ABCA6Q8N139 1617 aa3.95□□□□□ -1.78
CPNE3-211ENST00000621526 MYO3AQ8NEV4 1616 aa3.95□□□□□ -1.78
CPNE3-211ENST00000621526 RNF17Q9BXT8 1623 aaKnown RBP3.95□□□□□ -1.78
CPNE3-211ENST00000621526 TMEM2Q9UHN6 1383 aa3.95□□□□□ -1.78
CPNE3-211ENST00000621526 PPP1R15AO75807 674 aaPredicted RBP3.95□□□□□ -1.78
CPNE3-211ENST00000621526 TSPY4P0CV99 314 aa3.95□□□□□ -1.78
CPNE3-211ENST00000621526 TSPY10P0CW01 314 aa3.95□□□□□ -1.78
CPNE3-211ENST00000621526 SF3B2Q13435 895 aaKnown RBP3.95□□□□□ -1.78
CPNE3-211ENST00000621526 BRINP3Q76B58 766 aa3.95□□□□□ -1.78
CPNE3-211ENST00000621526 STAG3Q9UJ98 1225 aa3.95□□□□□ -1.78
CPNE3-211ENST00000621526 LRP6O75581 1613 aa3.95□□□□□ -1.78
CPNE3-211ENST00000621526 ABCC3O15438 1527 aa3.95□□□□□ -1.78
CPNE3-211ENST00000621526 RGS12O14924 1447 aa3.95□□□□□ -1.78
CPNE3-211ENST00000621526 CTTNBP2Q8WZ74 1663 aa3.94□□□□□ -1.78
CPNE3-211ENST00000621526 SAMD9LQ8IVG5 1584 aa3.94□□□□□ -1.78
CPNE3-211ENST00000621526 SETBP1Q9Y6X0 1596 aa3.94□□□□□ -1.78
CPNE3-211ENST00000621526 ARHGAP23Q9P227 1491 aa3.94□□□□□ -1.78
CPNE3-211ENST00000621526 ONECUT3O60422 494 aaPredicted RBP3.94□□□□□ -1.78
CPNE3-211ENST00000621526 IDI1Q13907 227 aa3.94□□□□□ -1.78
CPNE3-211ENST00000621526 GJD4Q96KN9 370 aaPredicted RBP3.94□□□□□ -1.78
CPNE3-211ENST00000621526 SLC52A1Q9NWF4 448 aa3.94□□□□□ -1.78
CPNE3-211ENST00000621526 GPATCH8Q9UKJ3 1502 aaKnown RBP3.94□□□□□ -1.78
CPNE3-211ENST00000621526 BLMP54132 1417 aaPredicted RBP3.94□□□□□ -1.78
CPNE3-211ENST00000621526 SETD5Q9C0A6 1442 aa3.94□□□□□ -1.78
CPNE3-211ENST00000621526 KIDINS220Q9ULH0 1771 aa3.94□□□□□ -1.78
CPNE3-211ENST00000621526 SYNMO15061 1565 aa3.93□□□□□ -1.78
CPNE3-211ENST00000621526 C1QTNF8P60827 252 aa3.93□□□□□ -1.78
CPNE3-211ENST00000621526 DEFB132Q7Z7B7 95 aa3.93□□□□□ -1.78
CPNE3-211ENST00000621526 C14orf37Q86TY3 774 aa3.93□□□□□ -1.78
CPNE3-211ENST00000621526 SLIT1O75093 1534 aa3.93□□□□□ -1.78
CPNE3-211ENST00000621526 PRDM15P57071 1507 aaPredicted RBP3.93□□□□□ -1.78
CPNE3-211ENST00000621526 PLXNC1O60486 1568 aa3.93□□□□□ -1.78
CPNE3-211ENST00000621526 ZNF644Q9H582 1327 aaPredicted RBP3.93□□□□□ -1.78
CPNE3-211ENST00000621526 UBTFP17480 764 aaKnown RBP3.92□□□□□ -1.78
CPNE3-211ENST00000621526 BCANQ96GW7 911 aa3.92□□□□□ -1.78
CPNE3-211ENST00000621526 EEA1Q15075 1411 aa3.92□□□□□ -1.78
CPNE3-211ENST00000621526 NCOA2Q15596 1464 aa3.92□□□□□ -1.78
CPNE3-211ENST00000621526 MBD5Q9P267 1494 aa3.92□□□□□ -1.78
CPNE3-211ENST00000621526 CCNB3Q8WWL7 1395 aa3.91□□□□□ -1.78
CPNE3-211ENST00000621526 IQGAP1P46940 1657 aa3.91□□□□□ -1.78
CPNE3-211ENST00000621526 CLTCQ00610 1675 aaKnown RBP3.91□□□□□ -1.78
CPNE3-211ENST00000621526 SENP3-EIF4A1A0A087X0R7 540 aa3.91□□□□□ -1.78
CPNE3-211ENST00000621526 ADAMTS2O95450 1211 aa3.91□□□□□ -1.78
CPNE3-211ENST00000621526 BAG6P46379 1132 aa3.91□□□□□ -1.78
CPNE3-211ENST00000621526 ARHGAP31Q2M1Z3 1444 aa3.91□□□□□ -1.78
CPNE3-211ENST00000621526 ZNF784Q8NCA9 323 aaPredicted RBP3.91□□□□□ -1.78
CPNE3-211ENST00000621526 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.91□□□□□ -1.78
CPNE3-211ENST00000621526 KIF14Q15058 1648 aa3.91□□□□□ -1.78
CPNE3-211ENST00000621526 NKTRP30414 1462 aaKnown RBP3.91□□□□□ -1.78
CPNE3-211ENST00000621526 ARHGAP35Q9NRY4 1499 aa3.91□□□□□ -1.78
CPNE3-211ENST00000621526 ROBO1Q9Y6N7 1651 aa3.9□□□□□ -1.78
CPNE3-211ENST00000621526 MTUS2Q5JR59 1369 aa3.9□□□□□ -1.78
CPNE3-211ENST00000621526 PIK3R4Q99570 1358 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms