RNA–Protein interactions for RNA: ENST00000621040.4

GTF2I-219, Transcript of general transcription factor IIi, humanhuman

TSL 2

Gene GTF2I, Length 3,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-219ENST00000621040 CEP152O94986 1710 aa13.39□□□□□ -0.27
GTF2I-219ENST00000621040 HNRNPMP52272 730 aaKnown RBP eCLIP13.39□□□□□ -0.27
GTF2I-219ENST00000621040 MYO3AQ8NEV4 1616 aa13.38□□□□□ -0.27
GTF2I-219ENST00000621040 CNTLNQ9NXG0 1405 aa13.38□□□□□ -0.27
GTF2I-219ENST00000621040 LMTK3Q96Q04 1460 aa13.37□□□□□ -0.27
GTF2I-219ENST00000621040 SPAG9O60271 1321 aaKnown RBP13.37□□□□□ -0.27
GTF2I-219ENST00000621040 KDM5AP29375 1690 aaKnown RBP13.37□□□□□ -0.27
GTF2I-219ENST00000621040 ABCC3O15438 1527 aa13.36□□□□□ -0.27
GTF2I-219ENST00000621040 PTPRKQ15262 1439 aa13.36□□□□□ -0.27
GTF2I-219ENST00000621040 NPATQ14207 1427 aa13.35□□□□□ -0.27
GTF2I-219ENST00000621040 ROCK1Q13464 1354 aa13.35□□□□□ -0.27
GTF2I-219ENST00000621040 SPATA31D1Q6ZQQ2 1576 aa13.34□□□□□ -0.27
GTF2I-219ENST00000621040 STRCQ7RTU9 1775 aa13.34□□□□□ -0.27
GTF2I-219ENST00000621040 SETD1BQ9UPS6 1966 aaKnown RBP13.34□□□□□ -0.27
GTF2I-219ENST00000621040 NCOA1Q15788 1441 aa13.34□□□□□ -0.27
GTF2I-219ENST00000621040 IQGAP3Q86VI3 1631 aa13.34□□□□□ -0.27
GTF2I-219ENST00000621040 PPP6R1Q9UPN7 881 aa13.32□□□□□ -0.28
GTF2I-219ENST00000621040 TET3O43151 1660 aa13.31□□□□□ -0.28
GTF2I-219ENST00000621040 PZPP20742 1482 aa13.31□□□□□ -0.28
GTF2I-219ENST00000621040 ARHGAP31Q2M1Z3 1444 aa13.3□□□□□ -0.28
GTF2I-219ENST00000621040 PIK3C2BO00750 1634 aa13.29□□□□□ -0.28
GTF2I-219ENST00000621040 EFCAB6Q5THR3 1501 aa13.29□□□□□ -0.28
GTF2I-219ENST00000621040 ZNF777Q9ULD5 760 aaPredicted RBP13.28□□□□□ -0.28
GTF2I-219ENST00000621040 POLR1AO95602 1720 aaPredicted RBP13.27□□□□□ -0.29
GTF2I-219ENST00000621040 KIF15Q9NS87 1388 aa13.26□□□□□ -0.29
GTF2I-219ENST00000621040 E9PCH4 1651 aa13.26□□□□□ -0.29
GTF2I-219ENST00000621040 UBR1Q8IWV7 1749 aa13.26□□□□□ -0.29
GTF2I-219ENST00000621040 CEP170BQ9Y4F5 1589 aaPredicted RBP13.26□□□□□ -0.29
GTF2I-219ENST00000621040 SYNMO15061 1565 aa13.24□□□□□ -0.29
GTF2I-219ENST00000621040 APLP2Q06481 763 aa13.23□□□□□ -0.29
GTF2I-219ENST00000621040 ANKRD30AQ9BXX3 1397 aa13.23□□□□□ -0.29
GTF2I-219ENST00000621040 RPRD2Q5VT52 1461 aaKnown RBP13.22□□□□□ -0.29
GTF2I-219ENST00000621040 ZMYM3Q14202 1370 aa13.21□□□□□ -0.29
GTF2I-219ENST00000621040 ERVK-7P63135 1459 aa13.21□□□□□ -0.29
GTF2I-219ENST00000621040 PLA2R1Q13018 1463 aa13.21□□□□□ -0.29
GTF2I-219ENST00000621040 NEURL4Q96JN8 1562 aa13.2□□□□□ -0.3
GTF2I-219ENST00000621040 SPHKAPQ2M3C7 1700 aa13.19□□□□□ -0.3
GTF2I-219ENST00000621040 A2ML1A8K2U0 1454 aa13.19□□□□□ -0.3
GTF2I-219ENST00000621040 HFM1A2PYH4 1435 aa13.19□□□□□ -0.3
GTF2I-219ENST00000621040 TSPY4P0CV99 314 aa13.19□□□□□ -0.3
GTF2I-219ENST00000621040 TSPY10P0CW01 314 aa13.19□□□□□ -0.3
GTF2I-219ENST00000621040 TRIM26Q12899 539 aaPredicted RBP13.19□□□□□ -0.3
GTF2I-219ENST00000621040 NLRP1Q9C000 1473 aa13.18□□□□□ -0.3
GTF2I-219ENST00000621040 NOS1P29475 1434 aa13.18□□□□□ -0.3
GTF2I-219ENST00000621040 ANKRD50Q9ULJ7 1429 aa13.18□□□□□ -0.3
GTF2I-219ENST00000621040 NAIPQ13075 1403 aa13.17□□□□□ -0.3
GTF2I-219ENST00000621040 ARID4BQ4LE39 1312 aaPredicted RBP13.16□□□□□ -0.3
GTF2I-219ENST00000621040 MYO5BQ9ULV0 1848 aa13.16□□□□□ -0.3
GTF2I-219ENST00000621040 UGGT1Q9NYU2 1555 aa13.15□□□□□ -0.3
GTF2I-219ENST00000621040 SLIT1O75093 1534 aa13.15□□□□□ -0.3
GTF2I-219ENST00000621040 UHRF1BP1Q6BDS2 1440 aa13.15□□□□□ -0.3
GTF2I-219ENST00000621040 AEBP2Q6ZN18 517 aaPredicted RBP13.14□□□□□ -0.31
GTF2I-219ENST00000621040 ARHGAP23Q9P227 1491 aa13.14□□□□□ -0.31
GTF2I-219ENST00000621040 TMEM131LA2VDJ0 1609 aa13.14□□□□□ -0.31
GTF2I-219ENST00000621040 MED14O60244 1454 aa13.13□□□□□ -0.31
GTF2I-219ENST00000621040 ADGRB3O60242 1522 aa13.13□□□□□ -0.31
GTF2I-219ENST00000621040 PTPRTO14522 1441 aa13.11□□□□□ -0.31
GTF2I-219ENST00000621040 KIF3BO15066 747 aa13.1□□□□□ -0.31
GTF2I-219ENST00000621040 IFT172Q9UG01 1749 aa13.1□□□□□ -0.31
GTF2I-219ENST00000621040 TRPM2O94759 1503 aa13.1□□□□□ -0.31
GTF2I-219ENST00000621040 IQGAP1P46940 1657 aa13.09□□□□□ -0.31
GTF2I-219ENST00000621040 CFAP65Q6ZU64 1925 aaKnown RBP13.09□□□□□ -0.31
GTF2I-219ENST00000621040 TNRQ92752 1358 aa13.08□□□□□ -0.32
GTF2I-219ENST00000621040 LTBP4Q8N2S1 1624 aa13.08□□□□□ -0.32
GTF2I-219ENST00000621040 MLECQ14165 292 aa13.08□□□□□ -0.32
GTF2I-219ENST00000621040 RRP7BPQ9NSQ0 103 aa13.07□□□□□ -0.32
GTF2I-219ENST00000621040 STRCP1A6NGW2 1772 aa13.07□□□□□ -0.32
GTF2I-219ENST00000621040 CEBPAP49715 358 aaPredicted RBP13.07□□□□□ -0.32
GTF2I-219ENST00000621040 CLTCL1P53675 1640 aa13.06□□□□□ -0.32
GTF2I-219ENST00000621040 PRKCSHP14314 528 aaPredicted RBP13.06□□□□□ -0.32
GTF2I-219ENST00000621040 SETD1AO15047 1707 aaKnown RBP13.05□□□□□ -0.32
GTF2I-219ENST00000621040 FAM50AQ14320 339 aaKnown RBP13.04□□□□□ -0.32
GTF2I-219ENST00000621040 KIF1BO60333 1816 aa13.04□□□□□ -0.32
GTF2I-219ENST00000621040 GGT6Q6P531 493 aa13.04□□□□□ -0.32
GTF2I-219ENST00000621040 XIRP1Q702N8 1843 aaKnown RBP13.03□□□□□ -0.32
GTF2I-219ENST00000621040 KANK1Q14678 1352 aa13.03□□□□□ -0.32
GTF2I-219ENST00000621040 NWD1Q149M9 1564 aa13.03□□□□□ -0.32
GTF2I-219ENST00000621040 NRXN3Q9Y4C0 1643 aa13.03□□□□□ -0.32
GTF2I-219ENST00000621040 MYT1LQ9UL68 1186 aa13.03□□□□□ -0.32
GTF2I-219ENST00000621040 IQSEC2Q5JU85 1478 aa13.03□□□□□ -0.32
GTF2I-219ENST00000621040 WASHC2CQ9Y4E1 1318 aa13.02□□□□□ -0.32
GTF2I-219ENST00000621040 ZFYVE9O95405 1425 aa13.02□□□□□ -0.32
GTF2I-219ENST00000621040 PPLO60437 1756 aa13.02□□□□□ -0.32
GTF2I-219ENST00000621040 CHIC2Q9UKJ5 165 aa13□□□□□ -0.33
GTF2I-219ENST00000621040 BCL11AQ9H165 835 aa13□□□□□ -0.33
GTF2I-219ENST00000621040 FBXO31Q5XUX0 539 aaPredicted RBP12.99□□□□□ -0.33
GTF2I-219ENST00000621040 DIP2AQ14689 1571 aa12.99□□□□□ -0.33
GTF2I-219ENST00000621040 CHD2O14647 1828 aaKnown RBP12.98□□□□□ -0.33
GTF2I-219ENST00000621040 NEXMIFQ5QGS0 1516 aa12.98□□□□□ -0.33
GTF2I-219ENST00000621040 SETBP1Q9Y6X0 1596 aa12.97□□□□□ -0.33
GTF2I-219ENST00000621040 SCAF11Q99590 1463 aaKnown RBP12.95□□□□□ -0.34
GTF2I-219ENST00000621040 ACIN1Q9UKV3 1341 aaKnown RBP12.95□□□□□ -0.34
GTF2I-219ENST00000621040 ESF1Q9H501 851 aaKnown RBP12.94□□□□□ -0.34
GTF2I-219ENST00000621040 ALKQ9UM73 1620 aa12.94□□□□□ -0.34
GTF2I-219ENST00000621040 XRN1Q8IZH2 1706 aaKnown RBP12.94□□□□□ -0.34
GTF2I-219ENST00000621040 SETD5Q9C0A6 1442 aa12.94□□□□□ -0.34
GTF2I-219ENST00000621040 PKD2Q13563 968 aa12.94□□□□□ -0.34
GTF2I-219ENST00000621040 PRAG1Q86YV5 1406 aa12.93□□□□□ -0.34
GTF2I-219ENST00000621040 CPS1P31327 1500 aa12.93□□□□□ -0.34
GTF2I-219ENST00000621040 TMEM2Q9UHN6 1383 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms