RNA–Protein interactions for RNA: ENST00000620843.1

LPCAT3-213, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 5

Gene LPCAT3, Length 541 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-213ENST00000620843 GTF3C3Q9Y5Q9 886 aa13.32□□□□□ -0.28
LPCAT3-213ENST00000620843 ZSWIM6Q9HCJ5 1215 aa13.31□□□□□ -0.28
LPCAT3-213ENST00000620843 GPR153Q6NV75 609 aa13.3□□□□□ -0.28
LPCAT3-213ENST00000620843 ZNF710Q8N1W2 664 aa13.3□□□□□ -0.28
LPCAT3-213ENST00000620843 ZNF454Q8N9F8 522 aa13.3□□□□□ -0.28
LPCAT3-213ENST00000620843 KDM4CQ9H3R0 1056 aa13.3□□□□□ -0.28
LPCAT3-213ENST00000620843 ZDHHC16Q969W1 377 aa13.27□□□□□ -0.29
LPCAT3-213ENST00000620843 AMHR2Q16671 573 aa13.24□□□□□ -0.29
LPCAT3-213ENST00000620843 C6orf132Q5T0Z8 1188 aa13.23□□□□□ -0.29
LPCAT3-213ENST00000620843 ADAM33Q9BZ11 813 aa13.22□□□□□ -0.29
LPCAT3-213ENST00000620843 LHX6Q9UPM6 363 aa13.22□□□□□ -0.29
LPCAT3-213ENST00000620843 IL27Q8NEV9 243 aa13.21□□□□□ -0.29
LPCAT3-213ENST00000620843 SNPHO15079 494 aa13.2□□□□□ -0.3
LPCAT3-213ENST00000620843 PARP9Q8IXQ6 854 aa13.2□□□□□ -0.3
LPCAT3-213ENST00000620843 TTLL12Q14166 644 aaPredicted RBP13.18□□□□□ -0.3
LPCAT3-213ENST00000620843 CERKQ8TCT0 537 aa13.18□□□□□ -0.3
LPCAT3-213ENST00000620843 PPP4R3BQ5MIZ7 849 aa13.16□□□□□ -0.3
LPCAT3-213ENST00000620843 PADI6Q6TGC4 694 aa13.16□□□□□ -0.3
LPCAT3-213ENST00000620843 DAXXQ9UER7 740 aaPredicted RBP13.16□□□□□ -0.3
LPCAT3-213ENST00000620843 OTUD5Q96G74 571 aa13.15□□□□□ -0.3
LPCAT3-213ENST00000620843 FAM117AQ9C073 453 aa13.15□□□□□ -0.3
LPCAT3-213ENST00000620843 HOXB1P14653 301 aaPredicted RBP13.14□□□□□ -0.31
LPCAT3-213ENST00000620843 FAM161AQ3B820 660 aa13.14□□□□□ -0.31
LPCAT3-213ENST00000620843 PSDA5PKW4 1024 aaPredicted RBP13.13□□□□□ -0.31
LPCAT3-213ENST00000620843 PHOX2BQ99453 314 aa13.12□□□□□ -0.31
LPCAT3-213ENST00000620843 TIMELESSQ9UNS1 1208 aa13.12□□□□□ -0.31
LPCAT3-213ENST00000620843 GIGYF2Q6Y7W6 1299 aaKnown RBP13.1□□□□□ -0.31
LPCAT3-213ENST00000620843 REPIN1Q9BWE0 567 aaKnown RBP13.1□□□□□ -0.31
LPCAT3-213ENST00000620843 BCL2L12Q9HB09 334 aa13.1□□□□□ -0.31
LPCAT3-213ENST00000620843 RBM27Q9P2N5 1060 aaKnown RBP13.1□□□□□ -0.31
LPCAT3-213ENST00000620843 PRSS12P56730 875 aa13.09□□□□□ -0.31
LPCAT3-213ENST00000620843 MDM2Q00987 491 aaPredicted RBP13.09□□□□□ -0.31
LPCAT3-213ENST00000620843 TTC13Q8NBP0 860 aa13.09□□□□□ -0.31
LPCAT3-213ENST00000620843 CDCA7LQ96GN5 454 aa13.09□□□□□ -0.31
LPCAT3-213ENST00000620843 DDRGK1Q96HY6 314 aa13.09□□□□□ -0.31
LPCAT3-213ENST00000620843 ADGRG1Q9Y653 693 aa13.09□□□□□ -0.31
LPCAT3-213ENST00000620843 OATP04181 439 aa13.08□□□□□ -0.32
LPCAT3-213ENST00000620843 COL9A1P20849 921 aa13.08□□□□□ -0.32
LPCAT3-213ENST00000620843 METTL3Q86U44 580 aaKnown RBP13.08□□□□□ -0.32
LPCAT3-213ENST00000620843 PLEKHG3A1L390 1219 aa13.07□□□□□ -0.32
LPCAT3-213ENST00000620843 CLCN1P35523 988 aa13.07□□□□□ -0.32
LPCAT3-213ENST00000620843 PTPREP23469 700 aa13.06□□□□□ -0.32
LPCAT3-213ENST00000620843 GPCPD1Q9NPB8 672 aa13.06□□□□□ -0.32
LPCAT3-213ENST00000620843 MS4A1P11836 297 aa13.05□□□□□ -0.32
LPCAT3-213ENST00000620843 PXYLP1Q8TE99 480 aa13.05□□□□□ -0.32
LPCAT3-213ENST00000620843 NLRP7Q8WX94 980 aa13.05□□□□□ -0.32
LPCAT3-213ENST00000620843 TMUB1Q9BVT8 246 aa13.05□□□□□ -0.32
LPCAT3-213ENST00000620843 LHX8Q68G74 356 aa13.04□□□□□ -0.32
LPCAT3-213ENST00000620843 PPP1R3GB7ZBB8 358 aa13.03□□□□□ -0.32
LPCAT3-213ENST00000620843 FAM198AQ9UFP1 575 aa13.03□□□□□ -0.32
LPCAT3-213ENST00000620843 ERICH6Q7L0X2 663 aa13.01□□□□□ -0.33
LPCAT3-213ENST00000620843 RBM46Q8TBY0 533 aaKnown RBP13□□□□□ -0.33
LPCAT3-213ENST00000620843 TSKSQ9UJT2 592 aa12.99□□□□□ -0.33
LPCAT3-213ENST00000620843 SSTR3P32745 418 aaPredicted RBP12.98□□□□□ -0.33
LPCAT3-213ENST00000620843 C14orf37Q86TY3 774 aa12.98□□□□□ -0.33
LPCAT3-213ENST00000620843 KCNK17Q96T54 332 aa12.98□□□□□ -0.33
LPCAT3-213ENST00000620843 FAM217BQ9NTX9 383 aaPredicted RBP12.96□□□□□ -0.33
LPCAT3-213ENST00000620843 TRIM6-TRIM34B2RNG4 842 aa12.95□□□□□ -0.34
LPCAT3-213ENST00000620843 KCNH8Q96L42 1107 aa12.94□□□□□ -0.34
LPCAT3-213ENST00000620843 EYA1Q99502 592 aa12.94□□□□□ -0.34
LPCAT3-213ENST00000620843 ERBB3P21860 1342 aa12.93□□□□□ -0.34
LPCAT3-213ENST00000620843 NBPF26B4DH59 902 aa12.93□□□□□ -0.34
LPCAT3-213ENST00000620843 C3orf80F5H4A9 247 aa12.93□□□□□ -0.34
LPCAT3-213ENST00000620843 PROX2Q3B8N5 592 aa12.93□□□□□ -0.34
LPCAT3-213ENST00000620843 NUDT18Q6ZVK8 323 aa12.93□□□□□ -0.34
LPCAT3-213ENST00000620843 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.92□□□□□ -0.34
LPCAT3-213ENST00000620843 RCCD1A6NED2 376 aa12.92□□□□□ -0.34
LPCAT3-213ENST00000620843 VARS2Q5ST30 1063 aaKnown RBP12.92□□□□□ -0.34
LPCAT3-213ENST00000620843 PACS2Q86VP3 889 aa12.92□□□□□ -0.34
LPCAT3-213ENST00000620843 BEGAINQ9BUH8 593 aa12.92□□□□□ -0.34
LPCAT3-213ENST00000620843 PNMA3Q9UL41 463 aa12.92□□□□□ -0.34
LPCAT3-213ENST00000620843 ST18O60284 1047 aa12.91□□□□□ -0.34
LPCAT3-213ENST00000620843 PSEN2P49810 448 aa12.9□□□□□ -0.34
LPCAT3-213ENST00000620843 TATDN2Q93075 761 aa12.9□□□□□ -0.34
LPCAT3-213ENST00000620843 GOPCQ9HD26 462 aa12.9□□□□□ -0.34
LPCAT3-213ENST00000620843 ZBED2Q9BTP6 218 aa12.88□□□□□ -0.35
LPCAT3-213ENST00000620843 SMAPO00193 183 aa12.87□□□□□ -0.35
LPCAT3-213ENST00000620843 DNAJB2P25686 324 aa12.87□□□□□ -0.35
LPCAT3-213ENST00000620843 EMP3P54852 163 aa12.87□□□□□ -0.35
LPCAT3-213ENST00000620843 MARVELD3Q96A59 401 aa12.87□□□□□ -0.35
LPCAT3-213ENST00000620843 ONECUT3O60422 494 aaPredicted RBP12.86□□□□□ -0.35
LPCAT3-213ENST00000620843 SH3D19Q5HYK7 790 aa12.86□□□□□ -0.35
LPCAT3-213ENST00000620843 PCMTD1Q96MG8 357 aaPredicted RBP12.86□□□□□ -0.35
LPCAT3-213ENST00000620843 ARHGAP33O14559 1287 aa12.85□□□□□ -0.35
LPCAT3-213ENST00000620843 POTEEQ6S8J3 1075 aa12.85□□□□□ -0.35
LPCAT3-213ENST00000620843 KIAA1468Q9P260 1216 aa12.85□□□□□ -0.35
LPCAT3-213ENST00000620843 RSPH6AQ9H0K4 717 aa12.84□□□□□ -0.35
LPCAT3-213ENST00000620843 AXIN2Q9Y2T1 843 aa12.84□□□□□ -0.35
LPCAT3-213ENST00000620843 TMEM134Q9H6X4 195 aa12.82□□□□□ -0.36
LPCAT3-213ENST00000620843 FAM205CA6NFA0 338 aa12.81□□□□□ -0.36
LPCAT3-213ENST00000620843 DMRTA1Q5VZB9 504 aa12.81□□□□□ -0.36
LPCAT3-213ENST00000620843 SKIV2LQ15477 1246 aaKnown RBP12.8□□□□□ -0.36
LPCAT3-213ENST00000620843 DDX11L8A8MPP1 907 aa12.79□□□□□ -0.36
LPCAT3-213ENST00000620843 CD46P15529 392 aa12.79□□□□□ -0.36
LPCAT3-213ENST00000620843 PBX2P40425 430 aa12.79□□□□□ -0.36
LPCAT3-213ENST00000620843 SULF1Q8IWU6 871 aa12.79□□□□□ -0.36
LPCAT3-213ENST00000620843 FAM163AQ96GL9 167 aaPredicted RBP12.79□□□□□ -0.36
LPCAT3-213ENST00000620843 TBC1D2Q9BYX2 928 aa12.79□□□□□ -0.36
LPCAT3-213ENST00000620843 POLR3EQ9NVU0 708 aa12.79□□□□□ -0.36
LPCAT3-213ENST00000620843 MYSM1Q5VVJ2 828 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms