RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 CEP170BQ9Y4F5 1589 aaPredicted RBP17.66■□□□□ 0.42
TARDBP-221ENST00000619555 ZNF142P52746 1687 aaPredicted RBP17.65■□□□□ 0.42
TARDBP-221ENST00000619555 MAP3K1Q13233 1512 aa17.63■□□□□ 0.41
TARDBP-221ENST00000619555 PKD2Q13563 968 aa17.63■□□□□ 0.41
TARDBP-221ENST00000619555 WASHC2CQ9Y4E1 1318 aa17.63■□□□□ 0.41
TARDBP-221ENST00000619555 PLA2R1Q13018 1463 aa17.62■□□□□ 0.41
TARDBP-221ENST00000619555 ZNF335Q9H4Z2 1342 aaPredicted RBP17.61■□□□□ 0.41
TARDBP-221ENST00000619555 TNRQ92752 1358 aa17.61■□□□□ 0.41
TARDBP-221ENST00000619555 A2ML1A8K2U0 1454 aa17.61■□□□□ 0.41
TARDBP-221ENST00000619555 TCOF1Q13428 1488 aaKnown RBP17.61■□□□□ 0.41
TARDBP-221ENST00000619555 KDM5DQ9BY66 1539 aa17.61■□□□□ 0.41
TARDBP-221ENST00000619555 PZPP20742 1482 aa17.59■□□□□ 0.41
TARDBP-221ENST00000619555 MYOM3Q5VTT5 1437 aa17.59■□□□□ 0.41
TARDBP-221ENST00000619555 DNMT1P26358 1616 aaKnown RBP17.58■□□□□ 0.41
TARDBP-221ENST00000619555 MIA2Q96PC5 1412 aa17.58■□□□□ 0.41
TARDBP-221ENST00000619555 MAST1Q9Y2H9 1570 aa17.57■□□□□ 0.4
TARDBP-221ENST00000619555 FAM135AQ9P2D6 1515 aa17.57■□□□□ 0.4
TARDBP-221ENST00000619555 IQSEC2Q5JU85 1478 aa17.55■□□□□ 0.4
TARDBP-221ENST00000619555 APLP2Q06481 763 aa17.54■□□□□ 0.4
TARDBP-221ENST00000619555 RNF17Q9BXT8 1623 aaKnown RBP17.53■□□□□ 0.4
TARDBP-221ENST00000619555 ABCC3O15438 1527 aa17.52■□□□□ 0.39
TARDBP-221ENST00000619555 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.51■□□□□ 0.39
TARDBP-221ENST00000619555 ABCC5O15440 1437 aa17.5■□□□□ 0.39
TARDBP-221ENST00000619555 THEMISQ8N1K5 641 aaPredicted RBP17.5■□□□□ 0.39
TARDBP-221ENST00000619555 CFAP65Q6ZU64 1925 aaKnown RBP17.5■□□□□ 0.39
TARDBP-221ENST00000619555 NLRP1Q9C000 1473 aa17.5■□□□□ 0.39
TARDBP-221ENST00000619555 UBAP1LF5GYI3 381 aa17.49■□□□□ 0.39
TARDBP-221ENST00000619555 ANKLE2Q86XL3 938 aa17.49■□□□□ 0.39
TARDBP-221ENST00000619555 MROH1Q8NDA8 1641 aa17.49■□□□□ 0.39
TARDBP-221ENST00000619555 EIF2AK4Q9P2K8 1649 aaKnown RBP17.49■□□□□ 0.39
TARDBP-221ENST00000619555 POLR1AO95602 1720 aaPredicted RBP17.49■□□□□ 0.39
TARDBP-221ENST00000619555 NEURL4Q96JN8 1562 aa17.49■□□□□ 0.39
TARDBP-221ENST00000619555 DUOX2Q9NRD8 1548 aa17.48■□□□□ 0.39
TARDBP-221ENST00000619555 PTPN23Q9H3S7 1636 aa17.48■□□□□ 0.39
TARDBP-221ENST00000619555 RRP7BPQ9NSQ0 103 aa17.48■□□□□ 0.39
TARDBP-221ENST00000619555 KIF15Q9NS87 1388 aa17.47■□□□□ 0.39
TARDBP-221ENST00000619555 UGGT1Q9NYU2 1555 aa17.47■□□□□ 0.39
TARDBP-221ENST00000619555 ZC3H13Q5T200 1668 aaKnown RBP17.46■□□□□ 0.39
TARDBP-221ENST00000619555 CEP152O94986 1710 aa17.46■□□□□ 0.39
TARDBP-221ENST00000619555 SPATA31D1Q6ZQQ2 1576 aa17.45■□□□□ 0.38
TARDBP-221ENST00000619555 ERVK-7P63135 1459 aa17.45■□□□□ 0.38
TARDBP-221ENST00000619555 DISP3Q9P2K9 1392 aa17.45■□□□□ 0.38
TARDBP-221ENST00000619555 SHANK2Q9UPX8 1470 aa17.44■□□□□ 0.38
TARDBP-221ENST00000619555 CROCC2H7BZ55 1655 aa17.44■□□□□ 0.38
TARDBP-221ENST00000619555 DAPK1P53355 1430 aa17.44■□□□□ 0.38
TARDBP-221ENST00000619555 FGD6Q6ZV73 1430 aa17.44■□□□□ 0.38
TARDBP-221ENST00000619555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.43■□□□□ 0.382e-9■■□□□ 12.6
TARDBP-221ENST00000619555 CHIC2Q9UKJ5 165 aa17.43■□□□□ 0.38
TARDBP-221ENST00000619555 NPHP4O75161 1426 aaPredicted RBP17.43■□□□□ 0.38
TARDBP-221ENST00000619555 ERBINQ96RT1 1412 aa17.41■□□□□ 0.38
TARDBP-221ENST00000619555 MED14O60244 1454 aa17.41■□□□□ 0.38
TARDBP-221ENST00000619555 ILDR2Q71H61 639 aa17.4■□□□□ 0.38
TARDBP-221ENST00000619555 VWDEQ8N2E2 1590 aa17.4■□□□□ 0.38
TARDBP-221ENST00000619555 DEPDC5O75140 1603 aa17.39■□□□□ 0.38
TARDBP-221ENST00000619555 CPS1P31327 1500 aa17.38■□□□□ 0.37
TARDBP-221ENST00000619555 PRDM15P57071 1507 aaPredicted RBP17.38■□□□□ 0.37
TARDBP-221ENST00000619555 ANKRD30AQ9BXX3 1397 aa17.38■□□□□ 0.37
TARDBP-221ENST00000619555 ARHGAP31Q2M1Z3 1444 aa17.38■□□□□ 0.37
TARDBP-221ENST00000619555 IQGAP1P46940 1657 aa17.36■□□□□ 0.37
TARDBP-221ENST00000619555 UBR1Q8IWV7 1749 aa17.36■□□□□ 0.37
TARDBP-221ENST00000619555 PIP4K2BP78356 416 aa17.35■□□□□ 0.37
TARDBP-221ENST00000619555 FAM50AQ14320 339 aaKnown RBP17.35■□□□□ 0.37
TARDBP-221ENST00000619555 SCAF1Q9H7N4 1312 aaKnown RBP17.35■□□□□ 0.37
TARDBP-221ENST00000619555 KANK1Q14678 1352 aa17.35■□□□□ 0.37
TARDBP-221ENST00000619555 TOM1O60784 492 aa17.34■□□□□ 0.37
TARDBP-221ENST00000619555 LTKP29376 864 aa17.34■□□□□ 0.37
TARDBP-221ENST00000619555 TXNDC2Q86VQ3 553 aa17.33■□□□□ 0.36
TARDBP-221ENST00000619555 STRCP1A6NGW2 1772 aa17.32■□□□□ 0.36
TARDBP-221ENST00000619555 HSPA1LP34931 641 aa17.31■□□□□ 0.36
TARDBP-221ENST00000619555 SCAF11Q99590 1463 aaKnown RBP17.31■□□□□ 0.36
TARDBP-221ENST00000619555 ARHGAP23Q9P227 1491 aa17.31■□□□□ 0.36
TARDBP-221ENST00000619555 PIK3C2BO00750 1634 aa17.29■□□□□ 0.36
TARDBP-221ENST00000619555 IDI1Q13907 227 aa17.29■□□□□ 0.36
TARDBP-221ENST00000619555 STAG3Q9UJ98 1225 aa17.29■□□□□ 0.36
TARDBP-221ENST00000619555 SLIT1O75093 1534 aa17.29■□□□□ 0.36
TARDBP-221ENST00000619555 LMTK2Q8IWU2 1503 aa17.29■□□□□ 0.36
TARDBP-221ENST00000619555 ADGRL2O95490 1459 aa17.29■□□□□ 0.36
TARDBP-221ENST00000619555 EID1Q9Y6B2 187 aa17.28■□□□□ 0.36
TARDBP-221ENST00000619555 LRRC7Q96NW7 1537 aa17.27■□□□□ 0.36
TARDBP-221ENST00000619555 ALKQ9UM73 1620 aa17.27■□□□□ 0.36
TARDBP-221ENST00000619555 TMEM2Q9UHN6 1383 aa17.27■□□□□ 0.35
TARDBP-221ENST00000619555 SYNMO15061 1565 aa17.25■□□□□ 0.35
TARDBP-221ENST00000619555 ANKRD50Q9ULJ7 1429 aa17.25■□□□□ 0.35
TARDBP-221ENST00000619555 SOCS7O14512 581 aa17.25■□□□□ 0.35
TARDBP-221ENST00000619555 NOS1P29475 1434 aa17.24■□□□□ 0.35
TARDBP-221ENST00000619555 EFCAB6Q5THR3 1501 aa17.23■□□□□ 0.35
TARDBP-221ENST00000619555 SLC52A1Q9NWF4 448 aa17.2■□□□□ 0.34
TARDBP-221ENST00000619555 KDM5AP29375 1690 aaKnown RBP17.2■□□□□ 0.34
TARDBP-221ENST00000619555 PPARGC1BQ86YN6 1023 aaKnown RBP17.19■□□□□ 0.34
TARDBP-221ENST00000619555 SLC26A8Q96RN1 970 aa17.19■□□□□ 0.34
TARDBP-221ENST00000619555 ADGRB3O60242 1522 aa17.17■□□□□ 0.34
TARDBP-221ENST00000619555 XIRP1Q702N8 1843 aaKnown RBP17.17■□□□□ 0.34
TARDBP-221ENST00000619555 KCNA6P17658 529 aa17.16■□□□□ 0.34
TARDBP-221ENST00000619555 RPRD2Q5VT52 1461 aaKnown RBP17.16■□□□□ 0.34
TARDBP-221ENST00000619555 TET3O43151 1660 aa17.16■□□□□ 0.34
TARDBP-221ENST00000619555 MED1Q15648 1581 aaPredicted RBP17.15■□□□□ 0.34
TARDBP-221ENST00000619555 ITGAEP38570 1179 aa17.15■□□□□ 0.34
TARDBP-221ENST00000619555 BCANQ96GW7 911 aa17.14■□□□□ 0.33
TARDBP-221ENST00000619555 MYO5BQ9ULV0 1848 aa17.14■□□□□ 0.33
TARDBP-221ENST00000619555 ROCK1Q13464 1354 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms