RNA–Protein interactions for RNA: ENST00000619138.4

CNTNAP3B-215, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 3,840 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-215ENST00000619138 ANKRD50Q9ULJ7 1429 aa18.24■□□□□ 0.51
CNTNAP3B-215ENST00000619138 PLIN1O60240 522 aa18.24■□□□□ 0.51
CNTNAP3B-215ENST00000619138 RSPH4AQ5TD94 716 aa18.24■□□□□ 0.51
CNTNAP3B-215ENST00000619138 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.23■□□□□ 0.51
CNTNAP3B-215ENST00000619138 KDM5BQ9UGL1 1544 aa18.23■□□□□ 0.51
CNTNAP3B-215ENST00000619138 KDM2AQ9Y2K7 1162 aa18.23■□□□□ 0.51
CNTNAP3B-215ENST00000619138 TTC37Q6PGP7 1564 aa18.22■□□□□ 0.51
CNTNAP3B-215ENST00000619138 PDE4AP27815 886 aa18.22■□□□□ 0.51
CNTNAP3B-215ENST00000619138 CDC42BPAQ5VT25 1732 aa18.21■□□□□ 0.51
CNTNAP3B-215ENST00000619138 DNMT1P26358 1616 aaKnown RBP18.21■□□□□ 0.51
CNTNAP3B-215ENST00000619138 WDR7Q9Y4E6 1490 aa18.21■□□□□ 0.51
CNTNAP3B-215ENST00000619138 KDM6BO15054 1643 aa18.21■□□□□ 0.5
CNTNAP3B-215ENST00000619138 ROCK1Q13464 1354 aa18.21■□□□□ 0.5
CNTNAP3B-215ENST00000619138 UHRF1BP1LA0JNW5 1464 aa18.2■□□□□ 0.5
CNTNAP3B-215ENST00000619138 SYCP2Q9BX26 1530 aa18.2■□□□□ 0.5
CNTNAP3B-215ENST00000619138 ADCY10Q96PN6 1610 aa18.2■□□□□ 0.5
CNTNAP3B-215ENST00000619138 FAM69CQ0P6D2 419 aa18.19■□□□□ 0.5
CNTNAP3B-215ENST00000619138 PLCH2O75038 1416 aa18.18■□□□□ 0.5
CNTNAP3B-215ENST00000619138 CCDC141Q6ZP82 1450 aa18.18■□□□□ 0.5
CNTNAP3B-215ENST00000619138 KIF7Q2M1P5 1343 aa18.18■□□□□ 0.5
CNTNAP3B-215ENST00000619138 NBPF8Q3BBV2 869 aa18.18■□□□□ 0.5
CNTNAP3B-215ENST00000619138 CCDC7Q96M83 1385 aa18.17■□□□□ 0.5
CNTNAP3B-215ENST00000619138 RGL3Q3MIN7 710 aa18.16■□□□□ 0.5
CNTNAP3B-215ENST00000619138 CNTLNQ9NXG0 1405 aa18.16■□□□□ 0.5
CNTNAP3B-215ENST00000619138 KIF3BO15066 747 aa18.14■□□□□ 0.49
CNTNAP3B-215ENST00000619138 SCAPERQ9BY12 1400 aa18.14■□□□□ 0.49
CNTNAP3B-215ENST00000619138 RGS3P49796 1198 aa18.13■□□□□ 0.49
CNTNAP3B-215ENST00000619138 TRAPPC8Q9Y2L5 1435 aa18.13■□□□□ 0.49
CNTNAP3B-215ENST00000619138 SAMD9LQ8IVG5 1584 aa18.13■□□□□ 0.49
CNTNAP3B-215ENST00000619138 RAPGEF3O95398 923 aa18.13■□□□□ 0.49
CNTNAP3B-215ENST00000619138 PPM1GO15355 546 aaPredicted RBP18.13■□□□□ 0.49
CNTNAP3B-215ENST00000619138 FANCAO15360 1455 aa18.13■□□□□ 0.49
CNTNAP3B-215ENST00000619138 CD109Q6YHK3 1445 aa18.12■□□□□ 0.49
CNTNAP3B-215ENST00000619138 ARID4BQ4LE39 1312 aaPredicted RBP18.12■□□□□ 0.49
CNTNAP3B-215ENST00000619138 MBD5Q9P267 1494 aa18.11■□□□□ 0.49
CNTNAP3B-215ENST00000619138 CDC42BPBQ9Y5S2 1711 aa18.11■□□□□ 0.49
CNTNAP3B-215ENST00000619138 GGT6Q6P531 493 aa18.1■□□□□ 0.49
CNTNAP3B-215ENST00000619138 RCAN3Q9UKA8 241 aa18.1■□□□□ 0.49
CNTNAP3B-215ENST00000619138 MYO5CQ9NQX4 1742 aa18.09■□□□□ 0.49
CNTNAP3B-215ENST00000619138 PREX2Q70Z35 1606 aa18.09■□□□□ 0.49
CNTNAP3B-215ENST00000619138 PLEKHH2Q8IVE3 1493 aa18.09■□□□□ 0.49
CNTNAP3B-215ENST00000619138 ADGRL1O94910 1474 aa18.08■□□□□ 0.48
CNTNAP3B-215ENST00000619138 FRAT1Q92837 279 aaPredicted RBP18.08■□□□□ 0.48
CNTNAP3B-215ENST00000619138 CDCA7LQ96GN5 454 aa18.07■□□□□ 0.48
CNTNAP3B-215ENST00000619138 GSE1Q14687 1217 aa18.07■□□□□ 0.48
CNTNAP3B-215ENST00000619138 RRP1P56182 461 aaKnown RBP18.06■□□□□ 0.48
CNTNAP3B-215ENST00000619138 ARHGEF12Q9NZN5 1544 aa18.06■□□□□ 0.48
CNTNAP3B-215ENST00000619138 TCERG1O14776 1098 aaKnown RBP18.06■□□□□ 0.48
CNTNAP3B-215ENST00000619138 GCC2Q8IWJ2 1684 aa18.06■□□□□ 0.48
CNTNAP3B-215ENST00000619138 NFKBIBQ15653 356 aa18.05■□□□□ 0.48
CNTNAP3B-215ENST00000619138 CHGAP10645 457 aaKnown RBP18.04■□□□□ 0.48
CNTNAP3B-215ENST00000619138 DCAF11Q8TEB1 546 aa18.03■□□□□ 0.48
CNTNAP3B-215ENST00000619138 CC2D1BQ5T0F9 858 aaKnown RBP18.03■□□□□ 0.48
CNTNAP3B-215ENST00000619138 TRHP20396 242 aaPredicted RBP18.03■□□□□ 0.48
CNTNAP3B-215ENST00000619138 KIAA1107Q9UPP5 1409 aa18.03■□□□□ 0.48
CNTNAP3B-215ENST00000619138 ADGRL2O95490 1459 aa18.01■□□□□ 0.47
CNTNAP3B-215ENST00000619138 ANKRD30BQ9BXX2 1392 aa18.01■□□□□ 0.47
CNTNAP3B-215ENST00000619138 CARD11Q9BXL7 1154 aa18.01■□□□□ 0.47
CNTNAP3B-215ENST00000619138 BACH2Q9BYV9 841 aa18.01■□□□□ 0.47
CNTNAP3B-215ENST00000619138 CRBNQ96SW2 442 aa18■□□□□ 0.47
CNTNAP3B-215ENST00000619138 SHANK2Q9UPX8 1470 aa18■□□□□ 0.47
CNTNAP3B-215ENST00000619138 ADGBQ8N7X0 1667 aa17.99■□□□□ 0.47
CNTNAP3B-215ENST00000619138 MLECQ14165 292 aa17.99■□□□□ 0.47
CNTNAP3B-215ENST00000619138 FRAT2O75474 233 aaPredicted RBP17.98■□□□□ 0.47
CNTNAP3B-215ENST00000619138 DDRGK1Q96HY6 314 aa17.98■□□□□ 0.47
CNTNAP3B-215ENST00000619138 PZPP20742 1482 aa17.98■□□□□ 0.47
CNTNAP3B-215ENST00000619138 RIMBP3CA6NJZ7 1639 aa17.98■□□□□ 0.47
CNTNAP3B-215ENST00000619138 RIMBP3BA6NNM3 1639 aa17.98■□□□□ 0.47
CNTNAP3B-215ENST00000619138 RIMBP3Q9UFD9 1639 aa17.98■□□□□ 0.47
CNTNAP3B-215ENST00000619138 SMG6Q86US8 1419 aaKnown RBP17.98■□□□□ 0.47
CNTNAP3B-215ENST00000619138 ARHGEF5Q12774 1597 aa17.97■□□□□ 0.47
CNTNAP3B-215ENST00000619138 PNISRQ8TF01 805 aaKnown RBP17.97■□□□□ 0.47
CNTNAP3B-215ENST00000619138 SLKQ9H2G2 1235 aaPredicted RBP17.96■□□□□ 0.47
CNTNAP3B-215ENST00000619138 SPRYD3Q8NCJ5 442 aa17.96■□□□□ 0.47
CNTNAP3B-215ENST00000619138 DENND4BO75064 1496 aaPredicted RBP17.96■□□□□ 0.47
CNTNAP3B-215ENST00000619138 PLPPR3Q6T4P5 718 aa17.95■□□□□ 0.46
CNTNAP3B-215ENST00000619138 USP35Q9P2H5 1018 aa17.95■□□□□ 0.46
CNTNAP3B-215ENST00000619138 KANK1Q14678 1352 aa17.95■□□□□ 0.46
CNTNAP3B-215ENST00000619138 ABCC1P33527 1531 aa17.94■□□□□ 0.46
CNTNAP3B-215ENST00000619138 CROCC2H7BZ55 1655 aa17.94■□□□□ 0.46
CNTNAP3B-215ENST00000619138 ST20-MTHFSA0A0A6YYL1 179 aa17.91■□□□□ 0.46
CNTNAP3B-215ENST00000619138 CCDC144AA2RUR9 1427 aa17.91■□□□□ 0.46
CNTNAP3B-215ENST00000619138 C20orf194Q5TEA3 1177 aa17.9■□□□□ 0.46
CNTNAP3B-215ENST00000619138 WASHC2CQ9Y4E1 1318 aa17.9■□□□□ 0.46
CNTNAP3B-215ENST00000619138 GZF1Q9H116 711 aaPredicted RBP17.89■□□□□ 0.45
CNTNAP3B-215ENST00000619138 USP47Q96K76 1375 aa17.89■□□□□ 0.45
CNTNAP3B-215ENST00000619138 ABCA9Q8IUA7 1624 aa17.89■□□□□ 0.45
CNTNAP3B-215ENST00000619138 DUOX2Q9NRD8 1548 aa17.88■□□□□ 0.45
CNTNAP3B-215ENST00000619138 NAP1L5Q96NT1 182 aaPredicted RBP17.87■□□□□ 0.45
CNTNAP3B-215ENST00000619138 RPRD2Q5VT52 1461 aaKnown RBP17.87■□□□□ 0.45
CNTNAP3B-215ENST00000619138 FAM135AQ9P2D6 1515 aa17.87■□□□□ 0.45
CNTNAP3B-215ENST00000619138 TSPOAP1O95153 1857 aa17.86■□□□□ 0.45
CNTNAP3B-215ENST00000619138 ATP7AQ04656 1500 aa17.85■□□□□ 0.45
CNTNAP3B-215ENST00000619138 ZNF518AQ6AHZ1 1483 aa17.85■□□□□ 0.45
CNTNAP3B-215ENST00000619138 DHX29Q7Z478 1369 aaKnown RBP17.84■□□□□ 0.45
CNTNAP3B-215ENST00000619138 CANXP27824 592 aaKnown RBP17.83■□□□□ 0.45
CNTNAP3B-215ENST00000619138 ESF1Q9H501 851 aaKnown RBP17.83■□□□□ 0.45
CNTNAP3B-215ENST00000619138 ERBINQ96RT1 1412 aa17.82■□□□□ 0.44
CNTNAP3B-215ENST00000619138 NUTM2DQ5VT03 806 aaPredicted RBP17.82■□□□□ 0.44
CNTNAP3B-215ENST00000619138 UBE2Q2Q8WVN8 375 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms