RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 MAPK8IP3Q9UPT6 1336 aa3.83□□□□□ -1.8
LPP-221ENST00000618621 SPRYD3Q8NCJ5 442 aa3.83□□□□□ -1.8
LPP-221ENST00000618621 U2SURPO15042 1029 aaKnown RBP3.83□□□□□ -1.8
LPP-221ENST00000618621 FAM161AQ3B820 660 aa3.83□□□□□ -1.8
LPP-221ENST00000618621 CCDC184Q52MB2 194 aa3.83□□□□□ -1.8
LPP-221ENST00000618621 BAZ1AQ9NRL2 1556 aaPredicted RBP3.83□□□□□ -1.8
LPP-221ENST00000618621 EFCAB2Q5VUJ9 269 aa3.83□□□□□ -1.8
LPP-221ENST00000618621 CNKSR2Q8WXI2 1034 aa3.83□□□□□ -1.8
LPP-221ENST00000618621 RTF1Q92541 710 aaKnown RBP3.83□□□□□ -1.8
LPP-221ENST00000618621 OS9Q13438 667 aaPredicted RBP3.83□□□□□ -1.8
LPP-221ENST00000618621 PLIN1O60240 522 aa3.82□□□□□ -1.8
LPP-221ENST00000618621 GZF1Q9H116 711 aaPredicted RBP3.82□□□□□ -1.8
LPP-221ENST00000618621 KIF3BO15066 747 aa3.82□□□□□ -1.8
LPP-221ENST00000618621 WASHC2AQ641Q2 1341 aa3.82□□□□□ -1.8
LPP-221ENST00000618621 U2AF1L5P0DN76 240 aaPredicted RBP3.82□□□□□ -1.8
LPP-221ENST00000618621 U2AF1Q01081 240 aaKnown RBP eCLIP3.82□□□□□ -1.8
LPP-221ENST00000618621 SOX12O15370 315 aa3.82□□□□□ -1.8
LPP-221ENST00000618621 PHF14O94880 888 aa3.82□□□□□ -1.8
LPP-221ENST00000618621 ST20-MTHFSA0A0A6YYL1 179 aa3.82□□□□□ -1.8
LPP-221ENST00000618621 DRC7Q8IY82 874 aa3.82□□□□□ -1.8
LPP-221ENST00000618621 BACH2Q9BYV9 841 aa3.82□□□□□ -1.8
LPP-221ENST00000618621 A0A0G2JS52 829 aa3.82□□□□□ -1.8
LPP-221ENST00000618621 AAMPQ13685 434 aa3.82□□□□□ -1.8
LPP-221ENST00000618621 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.81□□□□□ -1.8
LPP-221ENST00000618621 EIF4G1Q04637 1599 aaKnown RBP3.81□□□□□ -1.8
LPP-221ENST00000618621 HSP90AA2PQ14568 343 aaPredicted RBP3.81□□□□□ -1.8
LPP-221ENST00000618621 NFKBIBQ15653 356 aa3.81□□□□□ -1.8
LPP-221ENST00000618621 STAC3Q96MF2 364 aa3.81□□□□□ -1.8
LPP-221ENST00000618621 HDGFL2Q7Z4V5 671 aaPredicted RBP3.81□□□□□ -1.8
LPP-221ENST00000618621 CHMP4CQ96CF2 233 aa3.81□□□□□ -1.8
LPP-221ENST00000618621 RRP1P56182 461 aaKnown RBP3.81□□□□□ -1.8
LPP-221ENST00000618621 ITPRIPQ8IWB1 547 aa3.81□□□□□ -1.8
LPP-221ENST00000618621 KRI1Q8N9T8 703 aaKnown RBP3.81□□□□□ -1.8
LPP-221ENST00000618621 SLKQ9H2G2 1235 aaPredicted RBP3.81□□□□□ -1.8
LPP-221ENST00000618621 RAPGEF2Q9Y4G8 1499 aa3.81□□□□□ -1.8
LPP-221ENST00000618621 KCNJ4P48050 445 aa3.81□□□□□ -1.8
LPP-221ENST00000618621 E9PSI1 815 aa3.81□□□□□ -1.8
LPP-221ENST00000618621 DDX11L8A8MPP1 907 aa3.8□□□□□ -1.8
LPP-221ENST00000618621 FAM69CQ0P6D2 419 aa3.8□□□□□ -1.8
LPP-221ENST00000618621 FHAD1B1AJZ9 1412 aa3.8□□□□□ -1.8
LPP-221ENST00000618621 C11orf95C9JLR9 678 aaPredicted RBP3.8□□□□□ -1.8
LPP-221ENST00000618621 HMMRO75330 724 aa3.8□□□□□ -1.8
LPP-221ENST00000618621 HTATSF1O43719 755 aaKnown RBP3.8□□□□□ -1.8
LPP-221ENST00000618621 RAD54L2Q9Y4B4 1467 aa3.8□□□□□ -1.8
LPP-221ENST00000618621 ZNF644Q9H582 1327 aaPredicted RBP3.8□□□□□ -1.8
LPP-221ENST00000618621 GPATCH3Q96I76 525 aa3.8□□□□□ -1.8
LPP-221ENST00000618621 KIF7Q2M1P5 1343 aa3.8□□□□□ -1.8
LPP-221ENST00000618621 ST18O60284 1047 aa3.8□□□□□ -1.8
LPP-221ENST00000618621 ADRA2BP18089 450 aa3.8□□□□□ -1.8
LPP-221ENST00000618621 KTN1Q86UP2 1357 aaKnown RBP3.79□□□□□ -1.8
LPP-221ENST00000618621 TPM4P67936 248 aa3.79□□□□□ -1.8
LPP-221ENST00000618621 NBPF8Q3BBV2 869 aa3.79□□□□□ -1.8
LPP-221ENST00000618621 LMOD3Q0VAK6 560 aa3.79□□□□□ -1.8
LPP-221ENST00000618621 ABCC8Q09428 1581 aa3.79□□□□□ -1.8
LPP-221ENST00000618621 NUTM2FA1L443 756 aa3.79□□□□□ -1.8
LPP-221ENST00000618621 CCDC7Q96M83 1385 aa3.79□□□□□ -1.8
LPP-221ENST00000618621 APAF1O14727 1248 aa3.78□□□□□ -1.8
LPP-221ENST00000618621 ROCK2O75116 1388 aaKnown RBP3.78□□□□□ -1.8
LPP-221ENST00000618621 CENPJQ9HC77 1338 aaPredicted RBP3.78□□□□□ -1.8
LPP-221ENST00000618621 MFAP1P55081 439 aaKnown RBP3.78□□□□□ -1.8
LPP-221ENST00000618621 ZKSCAN2Q63HK3 967 aa3.78□□□□□ -1.8
LPP-221ENST00000618621 SMC4Q9NTJ3 1288 aa3.78□□□□□ -1.8
LPP-221ENST00000618621 FANCD2Q9BXW9 1451 aa3.78□□□□□ -1.8
LPP-221ENST00000618621 VSIG10Q8N0Z9 540 aa3.78□□□□□ -1.8
LPP-221ENST00000618621 FRAT2O75474 233 aaPredicted RBP3.78□□□□□ -1.8
LPP-221ENST00000618621 CDCA7LQ96GN5 454 aa3.78□□□□□ -1.8
LPP-221ENST00000618621 CHMP5Q9NZZ3 219 aa3.78□□□□□ -1.8
LPP-221ENST00000618621 FAM43AQ8N2R8 423 aa3.78□□□□□ -1.8
LPP-221ENST00000618621 FHOD3Q2V2M9 1422 aa3.78□□□□□ -1.8
LPP-221ENST00000618621 SRPK2P78362 688 aaKnown RBP3.78□□□□□ -1.8
LPP-221ENST00000618621 TERF2IPQ9NYB0 399 aa3.78□□□□□ -1.8
LPP-221ENST00000618621 NUP155O75694 1391 aa3.78□□□□□ -1.8
LPP-221ENST00000618621 AQRO60306 1485 aaKnown RBP eCLIP3.78□□□□□ -1.8
LPP-221ENST00000618621 TNNT3P45378 269 aaPredicted RBP3.78□□□□□ -1.8
LPP-221ENST00000618621 AFAP1Q8N556 730 aa3.78□□□□□ -1.81
LPP-221ENST00000618621 BCCIPQ9P287 314 aaKnown RBP eCLIP3.78□□□□□ -1.81
LPP-221ENST00000618621 CARMIL2Q6F5E8 1435 aa3.77□□□□□ -1.81
LPP-221ENST00000618621 CCDC34Q96HJ3 373 aa3.77□□□□□ -1.81
LPP-221ENST00000618621 MYBBP1AQ9BQG0 1328 aaKnown RBP3.77□□□□□ -1.81
LPP-221ENST00000618621 KIF15Q9NS87 1388 aa3.77□□□□□ -1.81
LPP-221ENST00000618621 ANKRD45Q5TZF3 282 aa3.77□□□□□ -1.81
LPP-221ENST00000618621 ZNF526Q8TF50 670 aaPredicted RBP3.77□□□□□ -1.81
LPP-221ENST00000618621 ATP6V1DQ9Y5K8 247 aa3.77□□□□□ -1.81
LPP-221ENST00000618621 PTPRGP23470 1445 aa3.77□□□□□ -1.81
LPP-221ENST00000618621 MTERF4Q7Z6M4 381 aaKnown RBP3.77□□□□□ -1.81
LPP-221ENST00000618621 HMGB1P09429 215 aaKnown RBP3.77□□□□□ -1.81
LPP-221ENST00000618621 CCDC146Q8IYE0 955 aa3.77□□□□□ -1.81
LPP-221ENST00000618621 TRIM63Q969Q1 353 aa3.77□□□□□ -1.81
LPP-221ENST00000618621 NAP1L2Q9ULW6 460 aaPredicted RBP3.77□□□□□ -1.81
LPP-221ENST00000618621 SMG6Q86US8 1419 aaKnown RBP3.77□□□□□ -1.81
LPP-221ENST00000618621 SPAG9O60271 1321 aaKnown RBP3.77□□□□□ -1.81
LPP-221ENST00000618621 WASHC2CQ9Y4E1 1318 aa3.77□□□□□ -1.81
LPP-221ENST00000618621 CWC22Q9HCG8 908 aaKnown RBP3.77□□□□□ -1.81
LPP-221ENST00000618621 ZMYND15Q9H091 742 aa3.77□□□□□ -1.81
LPP-221ENST00000618621 ADAMTS8Q9UP79 889 aa3.76□□□□□ -1.81
LPP-221ENST00000618621 NESP48681 1621 aa3.76□□□□□ -1.81
LPP-221ENST00000618621 TRAK1Q9UPV9 953 aa3.76□□□□□ -1.81
LPP-221ENST00000618621 MRE11P49959 708 aa3.76□□□□□ -1.81
LPP-221ENST00000618621 STK11IPQ8N1F8 1099 aa3.76□□□□□ -1.81
LPP-221ENST00000618621 COG6Q9Y2V7 657 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms