RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 GOLGA6L1Q8N7Z2 621 aa12.73□□□□□ -0.37
CUL4A-212ENST00000617546 HDAC5Q9UQL6 1122 aa12.73□□□□□ -0.37
CUL4A-212ENST00000617546 TPM3P06753 285 aa12.73□□□□□ -0.37
CUL4A-212ENST00000617546 NINLQ9Y2I6 1382 aa12.72□□□□□ -0.37
CUL4A-212ENST00000617546 CHMP4CQ96CF2 233 aa12.72□□□□□ -0.37
CUL4A-212ENST00000617546 LMOD3Q0VAK6 560 aa12.72□□□□□ -0.37
CUL4A-212ENST00000617546 ZKSCAN2Q63HK3 967 aa12.71□□□□□ -0.37
CUL4A-212ENST00000617546 POGKQ9P215 609 aa12.71□□□□□ -0.37
CUL4A-212ENST00000617546 CCDC39Q9UFE4 941 aa12.71□□□□□ -0.37
CUL4A-212ENST00000617546 WASHC2AQ641Q2 1341 aa12.71□□□□□ -0.38
CUL4A-212ENST00000617546 WASHC2CQ9Y4E1 1318 aa12.71□□□□□ -0.38
CUL4A-212ENST00000617546 BACH2Q9BYV9 841 aa12.71□□□□□ -0.38
CUL4A-212ENST00000617546 RUSC2Q8N2Y8 1516 aa12.71□□□□□ -0.38
CUL4A-212ENST00000617546 CARMIL2Q6F5E8 1435 aa12.7□□□□□ -0.38
CUL4A-212ENST00000617546 CCDC173Q0VFZ6 552 aa12.7□□□□□ -0.38
CUL4A-212ENST00000617546 LRRC9Q6ZRR7 1453 aa12.7□□□□□ -0.38
CUL4A-212ENST00000617546 FGD6Q6ZV73 1430 aa12.7□□□□□ -0.38
CUL4A-212ENST00000617546 SLC4A3P48751 1232 aa12.7□□□□□ -0.38
CUL4A-212ENST00000617546 FOXD1Q16676 465 aa12.7□□□□□ -0.38
CUL4A-212ENST00000617546 TPRNQ4KMQ1 711 aa12.69□□□□□ -0.38
CUL4A-212ENST00000617546 HDGFL2Q7Z4V5 671 aaPredicted RBP12.69□□□□□ -0.38
CUL4A-212ENST00000617546 FHOD3Q2V2M9 1422 aa12.69□□□□□ -0.38
CUL4A-212ENST00000617546 U2AF1L5P0DN76 240 aaPredicted RBP12.69□□□□□ -0.38
CUL4A-212ENST00000617546 U2AF1Q01081 240 aaKnown RBP eCLIP12.69□□□□□ -0.385e-9■□□□□ 10.7
CUL4A-212ENST00000617546 STAC3Q96MF2 364 aa12.69□□□□□ -0.38
CUL4A-212ENST00000617546 CCDC34Q96HJ3 373 aa12.69□□□□□ -0.38
CUL4A-212ENST00000617546 DDX19BQ9UMR2 479 aa12.69□□□□□ -0.38
CUL4A-212ENST00000617546 DIAPH3Q9NSV4 1193 aa12.69□□□□□ -0.38
CUL4A-212ENST00000617546 ANO8Q9HCE9 1232 aaPredicted RBP12.68□□□□□ -0.38
CUL4A-212ENST00000617546 GPS2Q13227 327 aa12.68□□□□□ -0.38
CUL4A-212ENST00000617546 KIF7Q2M1P5 1343 aa12.68□□□□□ -0.38
CUL4A-212ENST00000617546 KIF3AQ9Y496 699 aa12.68□□□□□ -0.38
CUL4A-212ENST00000617546 HMGN5P82970 282 aaKnown RBP12.67□□□□□ -0.38
CUL4A-212ENST00000617546 TEX35Q5T0J7 233 aa12.67□□□□□ -0.38
CUL4A-212ENST00000617546 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.67□□□□□ -0.381e-9■■■■■ 38.9
CUL4A-212ENST00000617546 ZNF771Q7L3S4 317 aaPredicted RBP12.67□□□□□ -0.38
CUL4A-212ENST00000617546 GPATCH3Q96I76 525 aa12.67□□□□□ -0.38
CUL4A-212ENST00000617546 REC8O95072 547 aa12.66□□□□□ -0.38
CUL4A-212ENST00000617546 MYOM3Q5VTT5 1437 aa12.66□□□□□ -0.38
CUL4A-212ENST00000617546 ST20-MTHFSA0A0A6YYL1 179 aa12.66□□□□□ -0.38
CUL4A-212ENST00000617546 FAM13BQ9NYF5 915 aa12.66□□□□□ -0.38
CUL4A-212ENST00000617546 SETQ01105 290 aaPredicted RBP12.65□□□□□ -0.38
CUL4A-212ENST00000617546 CCDC144AA2RUR9 1427 aa12.65□□□□□ -0.38
CUL4A-212ENST00000617546 LETM1O95202 739 aaPredicted RBP12.64□□□□□ -0.39
CUL4A-212ENST00000617546 C22orf23Q9BZE7 217 aa12.64□□□□□ -0.39
CUL4A-212ENST00000617546 PANK3Q9H999 370 aa12.64□□□□□ -0.39
CUL4A-212ENST00000617546 NASPP49321 788 aaPredicted RBP12.64□□□□□ -0.39
CUL4A-212ENST00000617546 IL27Q8NEV9 243 aa12.64□□□□□ -0.39
CUL4A-212ENST00000617546 BRPF3Q9ULD4 1205 aa12.64□□□□□ -0.39
CUL4A-212ENST00000617546 TRAK2O60296 914 aa12.64□□□□□ -0.39
CUL4A-212ENST00000617546 PLIN1O60240 522 aa12.64□□□□□ -0.39
CUL4A-212ENST00000617546 PAK3O75914 559 aaPredicted RBP12.64□□□□□ -0.39
CUL4A-212ENST00000617546 CCDC66A2RUB6 948 aa12.63□□□□□ -0.39
CUL4A-212ENST00000617546 ROCK1Q13464 1354 aa12.63□□□□□ -0.39
CUL4A-212ENST00000617546 RTF1Q92541 710 aaKnown RBP12.63□□□□□ -0.39
CUL4A-212ENST00000617546 CLUAP1Q96AJ1 413 aa12.63□□□□□ -0.39
CUL4A-212ENST00000617546 ERCC6Q03468 1493 aa12.63□□□□□ -0.39
CUL4A-212ENST00000617546 FYCO1Q9BQS8 1478 aa12.62□□□□□ -0.39
CUL4A-212ENST00000617546 ARID3AQ99856 593 aa12.62□□□□□ -0.39
CUL4A-212ENST00000617546 MBD3O95983 291 aa12.62□□□□□ -0.39
CUL4A-212ENST00000617546 UBE2Q2Q8WVN8 375 aa12.62□□□□□ -0.39
CUL4A-212ENST00000617546 CIZ1Q9ULV3 898 aaPredicted RBP12.62□□□□□ -0.39
CUL4A-212ENST00000617546 CASKIN1Q8WXD9 1431 aa12.61□□□□□ -0.39
CUL4A-212ENST00000617546 PDE3AQ14432 1141 aa12.61□□□□□ -0.39
CUL4A-212ENST00000617546 TERF2IPQ9NYB0 399 aa12.61□□□□□ -0.39
CUL4A-212ENST00000617546 TAF3Q5VWG9 929 aa12.61□□□□□ -0.39
CUL4A-212ENST00000617546 MSH5O43196 834 aa12.61□□□□□ -0.39
CUL4A-212ENST00000617546 SRPK2P78362 688 aaKnown RBP12.61□□□□□ -0.39
CUL4A-212ENST00000617546 HDGFP51858 240 aaKnown RBP12.6□□□□□ -0.39
CUL4A-212ENST00000617546 GOLGA6L19H0YKK7 550 aa12.6□□□□□ -0.39
CUL4A-212ENST00000617546 CCDC146Q8IYE0 955 aa12.6□□□□□ -0.39
CUL4A-212ENST00000617546 DZIP1LQ8IYY4 767 aaKnown RBP12.6□□□□□ -0.39
CUL4A-212ENST00000617546 NOM1Q5C9Z4 860 aaKnown RBP12.6□□□□□ -0.39
CUL4A-212ENST00000617546 COG6Q9Y2V7 657 aa12.59□□□□□ -0.39
CUL4A-212ENST00000617546 STK31Q9BXU1 1019 aa12.59□□□□□ -0.39
CUL4A-212ENST00000617546 ARGLU1Q9NWB6 273 aaPredicted RBP12.59□□□□□ -0.39
CUL4A-212ENST00000617546 PLEKHH2Q8IVE3 1493 aa12.58□□□□□ -0.39
CUL4A-212ENST00000617546 ATAD2BQ9ULI0 1458 aa12.58□□□□□ -0.39
CUL4A-212ENST00000617546 FRAT2O75474 233 aaPredicted RBP12.58□□□□□ -0.39
CUL4A-212ENST00000617546 SPAG9O60271 1321 aaKnown RBP12.58□□□□□ -0.4
CUL4A-212ENST00000617546 GNL2Q13823 731 aaKnown RBP12.58□□□□□ -0.4
CUL4A-212ENST00000617546 INTS3Q68E01 1043 aaKnown RBP12.58□□□□□ -0.4
CUL4A-212ENST00000617546 DHX8Q14562 1220 aaKnown RBP12.58□□□□□ -0.4
CUL4A-212ENST00000617546 FOXD4L1Q9NU39 408 aa12.58□□□□□ -0.4
CUL4A-212ENST00000617546 NAP1L2Q9ULW6 460 aaPredicted RBP12.57□□□□□ -0.4
CUL4A-212ENST00000617546 ANKRD45Q5TZF3 282 aa12.57□□□□□ -0.4
CUL4A-212ENST00000617546 R3HCC1Q9Y3T6 440 aaKnown RBP12.57□□□□□ -0.4
CUL4A-212ENST00000617546 MCM2P49736 904 aa12.57□□□□□ -0.4
CUL4A-212ENST00000617546 A0A0U1RQG5 324 aaPredicted RBP12.57□□□□□ -0.4
CUL4A-212ENST00000617546 API5Q9BZZ5 524 aaKnown RBP12.57□□□□□ -0.4
CUL4A-212ENST00000617546 TRIM6-TRIM34B2RNG4 842 aa12.56□□□□□ -0.4
CUL4A-212ENST00000617546 RUNDC1Q96C34 613 aa12.56□□□□□ -0.4
CUL4A-212ENST00000617546 HFM1A2PYH4 1435 aa12.56□□□□□ -0.4
CUL4A-212ENST00000617546 PDS5BQ9NTI5 1447 aa12.56□□□□□ -0.4
CUL4A-212ENST00000617546 GRPEL1Q9HAV7 217 aa12.56□□□□□ -0.4
CUL4A-212ENST00000617546 EFCAB5A4FU69 1503 aa12.56□□□□□ -0.4
CUL4A-212ENST00000617546 CWC22Q9HCG8 908 aaKnown RBP12.56□□□□□ -0.4
CUL4A-212ENST00000617546 SCAPERQ9BY12 1400 aa12.56□□□□□ -0.4
CUL4A-212ENST00000617546 CWC15Q9P013 229 aaKnown RBP12.55□□□□□ -0.4
CUL4A-212ENST00000617546 CADPSQ9ULU8 1353 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms