RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 KDM5DQ9BY66 1539 aa23.39■■□□□ 1.34
UBXN1-218ENST00000616865 ZNF335Q9H4Z2 1342 aaPredicted RBP23.38■■□□□ 1.33
UBXN1-218ENST00000616865 POLR1AO95602 1720 aaPredicted RBP23.38■■□□□ 1.33
UBXN1-218ENST00000616865 ARHGEF5Q12774 1597 aa23.36■■□□□ 1.33
UBXN1-218ENST00000616865 PZPP20742 1482 aa23.35■■□□□ 1.33
UBXN1-218ENST00000616865 NEURL4Q96JN8 1562 aa23.32■■□□□ 1.32
UBXN1-218ENST00000616865 KIF3BO15066 747 aa23.32■■□□□ 1.32
UBXN1-218ENST00000616865 TNRQ92752 1358 aa23.31■■□□□ 1.32
UBXN1-218ENST00000616865 RSPH4AQ5TD94 716 aa23.31■■□□□ 1.32
UBXN1-218ENST00000616865 ILDR2Q71H61 639 aa23.31■■□□□ 1.32
UBXN1-218ENST00000616865 MAST1Q9Y2H9 1570 aa23.27■■□□□ 1.32
UBXN1-218ENST00000616865 RNF17Q9BXT8 1623 aaKnown RBP23.27■■□□□ 1.32
UBXN1-218ENST00000616865 ZC3H13Q5T200 1668 aaKnown RBP23.26■■□□□ 1.31
UBXN1-218ENST00000616865 LRRC9Q6ZRR7 1453 aa23.26■■□□□ 1.31
UBXN1-218ENST00000616865 FBXO31Q5XUX0 539 aaPredicted RBP23.26■■□□□ 1.31
UBXN1-218ENST00000616865 VPS8Q8N3P4 1428 aa23.25■■□□□ 1.31
UBXN1-218ENST00000616865 UBAP1LF5GYI3 381 aa23.25■■□□□ 1.31
UBXN1-218ENST00000616865 WASHC2CQ9Y4E1 1318 aa23.25■■□□□ 1.31
UBXN1-218ENST00000616865 SOCS7O14512 581 aa23.24■■□□□ 1.31
UBXN1-218ENST00000616865 NLRP1Q9C000 1473 aa23.24■■□□□ 1.31
UBXN1-218ENST00000616865 EIF2AK4Q9P2K8 1649 aaKnown RBP23.23■■□□□ 1.31
UBXN1-218ENST00000616865 CPS1P31327 1500 aa23.23■■□□□ 1.31
UBXN1-218ENST00000616865 UGGT1Q9NYU2 1555 aa23.22■■□□□ 1.31
UBXN1-218ENST00000616865 TSPY4P0CV99 314 aa23.21■■□□□ 1.31
UBXN1-218ENST00000616865 TSPY10P0CW01 314 aa23.21■■□□□ 1.31
UBXN1-218ENST00000616865 MIA2Q96PC5 1412 aa23.21■■□□□ 1.31
UBXN1-218ENST00000616865 DEPDC5O75140 1603 aa23.2■■□□□ 1.3
UBXN1-218ENST00000616865 ABCC3O15438 1527 aa23.2■■□□□ 1.3
UBXN1-218ENST00000616865 SHANK2Q9UPX8 1470 aa23.18■■□□□ 1.3
UBXN1-218ENST00000616865 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.18■■□□□ 1.3
UBXN1-218ENST00000616865 MROH1Q8NDA8 1641 aa23.18■■□□□ 1.3
UBXN1-218ENST00000616865 MAP3K1Q13233 1512 aa23.18■■□□□ 1.3
UBXN1-218ENST00000616865 VWDEQ8N2E2 1590 aa23.17■■□□□ 1.3
UBXN1-218ENST00000616865 MED14O60244 1454 aa23.17■■□□□ 1.3
UBXN1-218ENST00000616865 CEP152O94986 1710 aa23.15■■□□□ 1.3
UBXN1-218ENST00000616865 IQGAP1P46940 1657 aa23.15■■□□□ 1.3
UBXN1-218ENST00000616865 ANKLE2Q86XL3 938 aa23.14■■□□□ 1.29
UBXN1-218ENST00000616865 THEMISQ8N1K5 641 aaPredicted RBP23.14■■□□□ 1.29
UBXN1-218ENST00000616865 NPHP4O75161 1426 aaPredicted RBP23.14■■□□□ 1.29
UBXN1-218ENST00000616865 MYOM3Q5VTT5 1437 aa23.14■■□□□ 1.29
UBXN1-218ENST00000616865 APLP2Q06481 763 aa23.13■■□□□ 1.29
UBXN1-218ENST00000616865 ERVK-7P63135 1459 aa23.12■■□□□ 1.29
UBXN1-218ENST00000616865 CROCC2H7BZ55 1655 aa23.11■■□□□ 1.29
UBXN1-218ENST00000616865 DUOX2Q9NRD8 1548 aa23.1■■□□□ 1.29
UBXN1-218ENST00000616865 KANK4Q5T7N3 995 aaPredicted RBP23.09■■□□□ 1.29
UBXN1-218ENST00000616865 UBR1Q8IWV7 1749 aa23.08■■□□□ 1.29
UBXN1-218ENST00000616865 PRDM15P57071 1507 aaPredicted RBP23.07■■□□□ 1.28
UBXN1-218ENST00000616865 STRCP1A6NGW2 1772 aa23.06■■□□□ 1.28
UBXN1-218ENST00000616865 SCAF1Q9H7N4 1312 aaKnown RBP23.06■■□□□ 1.28
UBXN1-218ENST00000616865 SYNMO15061 1565 aa23.06■■□□□ 1.28
UBXN1-218ENST00000616865 ALKQ9UM73 1620 aa23.05■■□□□ 1.28
UBXN1-218ENST00000616865 TOM1O60784 492 aa23.05■■□□□ 1.28
UBXN1-218ENST00000616865 PIP4K2BP78356 416 aa23.04■■□□□ 1.28
UBXN1-218ENST00000616865 MED1Q15648 1581 aaPredicted RBP23.04■■□□□ 1.28
UBXN1-218ENST00000616865 HSPA1LP34931 641 aa23.03■■□□□ 1.28
UBXN1-218ENST00000616865 CFAP65Q6ZU64 1925 aaKnown RBP23.02■■□□□ 1.28
UBXN1-218ENST00000616865 PTPN23Q9H3S7 1636 aa23.02■■□□□ 1.28
UBXN1-218ENST00000616865 ERBINQ96RT1 1412 aa23.01■■□□□ 1.27
UBXN1-218ENST00000616865 KIF15Q9NS87 1388 aa23■■□□□ 1.27
UBXN1-218ENST00000616865 LRRC7Q96NW7 1537 aa22.99■■□□□ 1.27
UBXN1-218ENST00000616865 ABCC5O15440 1437 aa22.99■■□□□ 1.27
UBXN1-218ENST00000616865 ARHGAP31Q2M1Z3 1444 aa22.99■■□□□ 1.27
UBXN1-218ENST00000616865 SCAF11Q99590 1463 aaKnown RBP22.98■■□□□ 1.27
UBXN1-218ENST00000616865 SLIT1O75093 1534 aa22.98■■□□□ 1.27
UBXN1-218ENST00000616865 ARHGAP23Q9P227 1491 aa22.97■■□□□ 1.27
UBXN1-218ENST00000616865 PIK3C2BO00750 1634 aa22.95■■□□□ 1.26
UBXN1-218ENST00000616865 DAPK1P53355 1430 aa22.95■■□□□ 1.26
UBXN1-218ENST00000616865 FGD6Q6ZV73 1430 aa22.91■■□□□ 1.26
UBXN1-218ENST00000616865 KDM5AP29375 1690 aaKnown RBP22.91■■□□□ 1.26
UBXN1-218ENST00000616865 RRP7BPQ9NSQ0 103 aa22.9■■□□□ 1.26
UBXN1-218ENST00000616865 LMTK2Q8IWU2 1503 aa22.89■■□□□ 1.26
UBXN1-218ENST00000616865 XIRP1Q702N8 1843 aaKnown RBP22.89■■□□□ 1.25
UBXN1-218ENST00000616865 LTKP29376 864 aa22.87■■□□□ 1.25
UBXN1-218ENST00000616865 KANK1Q14678 1352 aa22.87■■□□□ 1.25
UBXN1-218ENST00000616865 TXNDC2Q86VQ3 553 aa22.85■■□□□ 1.25
UBXN1-218ENST00000616865 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.85■■□□□ 1.25
UBXN1-218ENST00000616865 EFCAB6Q5THR3 1501 aa22.85■■□□□ 1.25
UBXN1-218ENST00000616865 ANKRD30AQ9BXX3 1397 aa22.84■■□□□ 1.25
UBXN1-218ENST00000616865 TMEM2Q9UHN6 1383 aa22.84■■□□□ 1.25
UBXN1-218ENST00000616865 PPARGC1BQ86YN6 1023 aaKnown RBP22.82■■□□□ 1.24
UBXN1-218ENST00000616865 EID1Q9Y6B2 187 aa22.82■■□□□ 1.24
UBXN1-218ENST00000616865 ADGRL2O95490 1459 aa22.79■■□□□ 1.24
UBXN1-218ENST00000616865 ADGRB3O60242 1522 aa22.79■■□□□ 1.24
UBXN1-218ENST00000616865 NOS1P29475 1434 aa22.78■■□□□ 1.24
UBXN1-218ENST00000616865 PHF23Q9BUL5 403 aaPredicted RBP22.78■■□□□ 1.24
UBXN1-218ENST00000616865 SENP3Q9H4L4 574 aaPredicted RBP22.77■■□□□ 1.24
UBXN1-218ENST00000616865 STAG3Q9UJ98 1225 aa22.77■■□□□ 1.24
UBXN1-218ENST00000616865 CHIC2Q9UKJ5 165 aa22.77■■□□□ 1.24
UBXN1-218ENST00000616865 TET3O43151 1660 aa22.76■■□□□ 1.23
UBXN1-218ENST00000616865 IDI1Q13907 227 aa22.75■■□□□ 1.23
UBXN1-218ENST00000616865 NWD1Q149M9 1564 aa22.73■■□□□ 1.23
UBXN1-218ENST00000616865 RPRD2Q5VT52 1461 aaKnown RBP22.72■■□□□ 1.23
UBXN1-218ENST00000616865 TMEM94Q12767 1356 aa22.7■■□□□ 1.22
UBXN1-218ENST00000616865 GCC2Q8IWJ2 1684 aa22.69■■□□□ 1.22
UBXN1-218ENST00000616865 NKTRP30414 1462 aaKnown RBP22.69■■□□□ 1.22
UBXN1-218ENST00000616865 MYO5BQ9ULV0 1848 aa22.68■■□□□ 1.22
UBXN1-218ENST00000616865 FAM135BQ49AJ0 1406 aa22.68■■□□□ 1.22
UBXN1-218ENST00000616865 ANKRD50Q9ULJ7 1429 aa22.68■■□□□ 1.22
UBXN1-218ENST00000616865 ROBO1Q9Y6N7 1651 aa22.68■■□□□ 1.22
UBXN1-218ENST00000616865 KCNA6P17658 529 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms