RNA–Protein interactions for RNA: ENST00000616577.4

TPT1-214, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3 BASIC

Gene TPT1, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-214ENST00000616577 KIF7Q2M1P5 1343 aa13.15□□□□□ -0.3
TPT1-214ENST00000616577 KIAA1211Q6ZU35 1233 aa13.15□□□□□ -0.3
TPT1-214ENST00000616577 IGF1RP08069 1367 aa13.15□□□□□ -0.3
TPT1-214ENST00000616577 DRC7Q8IY82 874 aa13.14□□□□□ -0.31
TPT1-214ENST00000616577 CCDC7Q96M83 1385 aa13.13□□□□□ -0.31
TPT1-214ENST00000616577 HDGFP51858 240 aaKnown RBP13.13□□□□□ -0.31
TPT1-214ENST00000616577 TERF2IPQ9NYB0 399 aa13.13□□□□□ -0.31
TPT1-214ENST00000616577 GOLGA6L6A8MZA4 724 aa13.13□□□□□ -0.31
TPT1-214ENST00000616577 NRDCO43847 1150 aa13.13□□□□□ -0.31
TPT1-214ENST00000616577 ELL2O00472 640 aaPredicted RBP13.12□□□□□ -0.31
TPT1-214ENST00000616577 KIF21BO75037 1637 aa13.12□□□□□ -0.31
TPT1-214ENST00000616577 WASHC2AQ641Q2 1341 aa13.12□□□□□ -0.31
TPT1-214ENST00000616577 GSE1Q14687 1217 aa13.12□□□□□ -0.31
TPT1-214ENST00000616577 ZNF644Q9H582 1327 aaPredicted RBP13.12□□□□□ -0.31
TPT1-214ENST00000616577 SLC4A10Q6U841 1118 aa13.12□□□□□ -0.31
TPT1-214ENST00000616577 NOL8Q76FK4 1167 aaKnown RBP13.12□□□□□ -0.31
TPT1-214ENST00000616577 PTMSP20962 102 aa13.11□□□□□ -0.31
TPT1-214ENST00000616577 E9PSI1 815 aa13.11□□□□□ -0.31
TPT1-214ENST00000616577 FGD6Q6ZV73 1430 aa13.1□□□□□ -0.31
TPT1-214ENST00000616577 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.1□□□□□ -0.31
TPT1-214ENST00000616577 TRIM6-TRIM34B2RNG4 842 aa13.1□□□□□ -0.31
TPT1-214ENST00000616577 STK31Q9BXU1 1019 aa13.1□□□□□ -0.31
TPT1-214ENST00000616577 PAK3O75914 559 aaPredicted RBP13.09□□□□□ -0.31
TPT1-214ENST00000616577 KIAA2012Q0VF49 1180 aa13.09□□□□□ -0.31
TPT1-214ENST00000616577 CGNL1Q0VF96 1302 aa13.09□□□□□ -0.31
TPT1-214ENST00000616577 UACAQ9BZF9 1416 aa13.08□□□□□ -0.32
TPT1-214ENST00000616577 WASHC2CQ9Y4E1 1318 aa13.08□□□□□ -0.32
TPT1-214ENST00000616577 FOXD4L5Q5VV16 416 aaPredicted RBP13.08□□□□□ -0.32
TPT1-214ENST00000616577 FOXD4L4Q8WXT5 416 aaPredicted RBP13.08□□□□□ -0.32
TPT1-214ENST00000616577 HMMRO75330 724 aa13.07□□□□□ -0.32
TPT1-214ENST00000616577 TULP1O00294 542 aaPredicted RBP13.07□□□□□ -0.32
TPT1-214ENST00000616577 ZKSCAN2Q63HK3 967 aa13.07□□□□□ -0.32
TPT1-214ENST00000616577 CNTLNQ9NXG0 1405 aa13.07□□□□□ -0.32
TPT1-214ENST00000616577 NUTM2FA1L443 756 aa13.06□□□□□ -0.32
TPT1-214ENST00000616577 ANKRD45Q5TZF3 282 aa13.06□□□□□ -0.32
TPT1-214ENST00000616577 FANCD2Q9BXW9 1451 aa13.05□□□□□ -0.32
TPT1-214ENST00000616577 SYAP1Q96A49 352 aaPredicted RBP13.05□□□□□ -0.32
TPT1-214ENST00000616577 LRRC9Q6ZRR7 1453 aa13.05□□□□□ -0.32
TPT1-214ENST00000616577 MYOM3Q5VTT5 1437 aa13.05□□□□□ -0.32
TPT1-214ENST00000616577 ARAP1Q96P48 1450 aa13.03□□□□□ -0.32
TPT1-214ENST00000616577 DDX11L8A8MPP1 907 aa13.03□□□□□ -0.32
TPT1-214ENST00000616577 CDCA7LQ96GN5 454 aa13.03□□□□□ -0.32
TPT1-214ENST00000616577 FGD5Q6ZNL6 1462 aa13.03□□□□□ -0.32
TPT1-214ENST00000616577 ST18O60284 1047 aa13.02□□□□□ -0.32
TPT1-214ENST00000616577 DDX49Q9Y6V7 483 aaKnown RBP13.02□□□□□ -0.32
TPT1-214ENST00000616577 LMOD3Q0VAK6 560 aa13.02□□□□□ -0.32
TPT1-214ENST00000616577 RAD54L2Q9Y4B4 1467 aa13.01□□□□□ -0.33
TPT1-214ENST00000616577 NPHP1O15259 732 aa13.01□□□□□ -0.33
TPT1-214ENST00000616577 ZNF330Q9Y3S2 320 aaPredicted RBP13.01□□□□□ -0.33
TPT1-214ENST00000616577 FOXD4L6Q3SYB3 417 aaPredicted RBP13.01□□□□□ -0.33
TPT1-214ENST00000616577 FOXD4L3Q6VB84 417 aaPredicted RBP13.01□□□□□ -0.33
TPT1-214ENST00000616577 LTV1Q96GA3 475 aaPredicted RBP13.01□□□□□ -0.33
TPT1-214ENST00000616577 GNL2Q13823 731 aaKnown RBP13□□□□□ -0.33
TPT1-214ENST00000616577 RRBP1Q9P2E9 1410 aaKnown RBP12.99□□□□□ -0.33
TPT1-214ENST00000616577 DZIP1LQ8IYY4 767 aaKnown RBP12.99□□□□□ -0.33
TPT1-214ENST00000616577 ADAMTS8Q9UP79 889 aa12.99□□□□□ -0.33
TPT1-214ENST00000616577 AMPHP49418 695 aa12.99□□□□□ -0.33
TPT1-214ENST00000616577 NGDNQ8NEJ9 315 aaKnown RBP12.99□□□□□ -0.33
TPT1-214ENST00000616577 PANK1Q8TE04 598 aa12.99□□□□□ -0.33
TPT1-214ENST00000616577 MINK1Q8N4C8 1332 aaPredicted RBP12.98□□□□□ -0.33
TPT1-214ENST00000616577 NFKBIBQ15653 356 aa12.98□□□□□ -0.33
TPT1-214ENST00000616577 CCDC184Q52MB2 194 aa12.98□□□□□ -0.33
TPT1-214ENST00000616577 RILPL2Q969X0 211 aa12.98□□□□□ -0.33
TPT1-214ENST00000616577 PTPRGP23470 1445 aa12.98□□□□□ -0.33
TPT1-214ENST00000616577 EVC2Q86UK5 1308 aa12.97□□□□□ -0.33
TPT1-214ENST00000616577 DDX19BQ9UMR2 479 aa12.97□□□□□ -0.33
TPT1-214ENST00000616577 CSB-PGBD3P0DP91 1061 aa12.97□□□□□ -0.33
TPT1-214ENST00000616577 CHMP3Q9Y3E7 222 aa12.97□□□□□ -0.33
TPT1-214ENST00000616577 NBPF8Q3BBV2 869 aa12.96□□□□□ -0.33
TPT1-214ENST00000616577 HTATSF1O43719 755 aaKnown RBP12.96□□□□□ -0.33
TPT1-214ENST00000616577 NCOA2Q15596 1464 aa12.96□□□□□ -0.33
TPT1-214ENST00000616577 AMER1Q5JTC6 1135 aaPredicted RBP12.96□□□□□ -0.33
TPT1-214ENST00000616577 GAPVD1Q14C86 1478 aa12.95□□□□□ -0.34
TPT1-214ENST00000616577 VGFO15240 615 aaPredicted RBP12.95□□□□□ -0.34
TPT1-214ENST00000616577 RIPK4P57078 832 aa12.95□□□□□ -0.34
TPT1-214ENST00000616577 GPATCH3Q96I76 525 aa12.95□□□□□ -0.34
TPT1-214ENST00000616577 HSP90B1P14625 803 aaKnown RBP12.95□□□□□ -0.34
TPT1-214ENST00000616577 LNPKQ9C0E8 428 aa12.95□□□□□ -0.34
TPT1-214ENST00000616577 BRD4O60885 1362 aaPredicted RBP12.95□□□□□ -0.34
TPT1-214ENST00000616577 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
TPT1-214ENST00000616577 CHMP5Q9NZZ3 219 aa12.95□□□□□ -0.34
TPT1-214ENST00000616577 HSP90AA2PQ14568 343 aaPredicted RBP12.95□□□□□ -0.34
TPT1-214ENST00000616577 CHMP4AQ9BY43 222 aa12.95□□□□□ -0.34
TPT1-214ENST00000616577 AKNAQ7Z591 1439 aa12.94□□□□□ -0.34
TPT1-214ENST00000616577 ANKRD50Q9ULJ7 1429 aa12.94□□□□□ -0.34
TPT1-214ENST00000616577 NGEFQ8N5V2 710 aa12.94□□□□□ -0.34
TPT1-214ENST00000616577 RUNDC1Q96C34 613 aa12.94□□□□□ -0.34
TPT1-214ENST00000616577 GORABQ5T7V8 394 aa12.94□□□□□ -0.34
TPT1-214ENST00000616577 CASKIN1Q8WXD9 1431 aa12.93□□□□□ -0.34
TPT1-214ENST00000616577 KIF16BQ96L93 1317 aa12.93□□□□□ -0.34
TPT1-214ENST00000616577 DIAPH1O60610 1272 aaKnown RBP12.93□□□□□ -0.34
TPT1-214ENST00000616577 SKOR2Q2VWA4 1001 aaPredicted RBP12.93□□□□□ -0.34
TPT1-214ENST00000616577 COG3Q96JB2 828 aa12.93□□□□□ -0.34
TPT1-214ENST00000616577 HDAC5Q9UQL6 1122 aa12.92□□□□□ -0.34
TPT1-214ENST00000616577 PHF14O94880 888 aa12.92□□□□□ -0.34
TPT1-214ENST00000616577 NBPF1Q3BBV0 1214 aa12.92□□□□□ -0.34
TPT1-214ENST00000616577 CUX1P39880 1505 aa12.92□□□□□ -0.34
TPT1-214ENST00000616577 TRHP20396 242 aaPredicted RBP12.91□□□□□ -0.34
TPT1-214ENST00000616577 CSPP1Q1MSJ5 1256 aa12.91□□□□□ -0.34
TPT1-214ENST00000616577 C22orf23Q9BZE7 217 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms